RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 SYNJ2O15056 1496 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 RARAP10276 462 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 KRT32Q14532 448 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 TMEFF1Q8IYR6 380 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 PRDM6Q9NQX0 595 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 HECW2Q9P2P5 1572 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
SNX3P1X-201ENST00000414887 GLDNQ6ZMI3 551 aaPredicted RBP0.69□□□□□ -2.3
SNX3P1X-201ENST00000414887 SPATA18Q8TC71 538 aa0.69□□□□□ -2.3
SNX3P1X-201ENST00000414887 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
SNX3P1X-201ENST00000414887 OTOGLQ3ZCN5 2332 aa0.69□□□□□ -2.3
SNX3P1X-201ENST00000414887 DNHD1Q96M86 4753 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 SYNGAP1Q96PV0 1343 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 C2CD3Q4AC94 2353 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 KRTAP4-5Q9BYR2 181 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 SRPK3Q9UPE1 567 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 SPG11Q96JI7 2443 aa0.68□□□□□ -2.3
SNX3P1X-201ENST00000414887 NSD1Q96L73 2696 aaPredicted RBP0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 ADRA1BP35368 520 aa0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 RIPPLY3P57055 190 aa0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 FOXK2Q01167 660 aa0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 SZT2Q5T011 3432 aa0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
SNX3P1X-201ENST00000414887 MAP1BP46821 2468 aaKnown RBP0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 KALRNO60229 2985 aa0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 FN1P02751 2386 aaKnown RBP0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 MNX1P50219 401 aaPredicted RBP0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 MLLT1Q03111 559 aaPredicted RBP0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 KRTAP21-3Q3LHN1 58 aa0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 LRRC4BQ9NT99 713 aa0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 WWC3Q9ULE0 1092 aa0.66□□□□□ -2.3
SNX3P1X-201ENST00000414887 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.3
SNX3P1X-201ENST00000414887 LAMA2P24043 3122 aaKnown RBP0.65□□□□□ -2.3
SNX3P1X-201ENST00000414887 KRTAP4-16G5E9R7 235 aaPredicted RBP0.65□□□□□ -2.31
SNX3P1X-201ENST00000414887 LBX1P52954 281 aa0.65□□□□□ -2.31
SNX3P1X-201ENST00000414887 P2RX7Q99572 595 aaKnown RBP0.65□□□□□ -2.31
SNX3P1X-201ENST00000414887 FAM208BQ5VWN6 2430 aa0.65□□□□□ -2.31
SNX3P1X-201ENST00000414887 FLNCQ14315 2725 aa0.64□□□□□ -2.31
SNX3P1X-201ENST00000414887 TRHP20396 242 aaPredicted RBP0.64□□□□□ -2.31
SNX3P1X-201ENST00000414887 RGS19P49795 217 aa0.64□□□□□ -2.31
SNX3P1X-201ENST00000414887 POLQO75417 2590 aa0.64□□□□□ -2.31
SNX3P1X-201ENST00000414887 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
SNX3P1X-201ENST00000414887 BSNQ9UPA5 3926 aa0.63□□□□□ -2.31
SNX3P1X-201ENST00000414887 SNRPBP14678 240 aaKnown RBP0.63□□□□□ -2.31
SNX3P1X-201ENST00000414887 ZNF784Q8NCA9 323 aaPredicted RBP0.63□□□□□ -2.31
SNX3P1X-201ENST00000414887 WHAMMQ8TF30 809 aa0.63□□□□□ -2.31
SNX3P1X-201ENST00000414887 ATRQ13535 2644 aa0.63□□□□□ -2.31
SNX3P1X-201ENST00000414887 NBEAL1Q6ZS30 2694 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 ZIC2O95409 532 aaPredicted RBP0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 ADRA2BP18089 450 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 KRTAP5-4Q6L8H1 288 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 CERKQ8TCT0 537 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 SRP68Q9UHB9 627 aaKnown RBP0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 HMCN1Q96RW7 5635 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 MEGF6O75095 1541 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 ACACBO00763 2458 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 MDN1Q9NU22 5596 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 GVINP1Q7Z2Y8 2422 aa0.62□□□□□ -2.31
SNX3P1X-201ENST00000414887 VCANP13611 3396 aa0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 KRT10P13645 584 aa0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 HOXB3P14651 431 aaPredicted RBP0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 RBMXL1Q96E39 390 aaKnown RBP0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 SPG7Q9UQ90 795 aa0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 FBN1P35555 2871 aaKnown RBP0.61□□□□□ -2.31
SNX3P1X-201ENST00000414887 AKAP13Q12802 2813 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 C8BP07358 591 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 EML3Q32P44 896 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 COL23A1Q86Y22 540 aaPredicted RBP0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 FMNL2Q96PY5 1086 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 MED1Q15648 1581 aaPredicted RBP0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 SETD1AO15047 1707 aaKnown RBP0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 REV3LO60673 3130 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
SNX3P1X-201ENST00000414887 FCGBPQ9Y6R7 5405 aaPredicted RBP0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 ITGBL1O95965 494 aaPredicted RBP0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 FHDC1Q9C0D6 1143 aaPredicted RBP0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 CD320Q9NPF0 282 aa0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 COLQQ9Y215 455 aaPredicted RBP0.59□□□□□ -2.31
SNX3P1X-201ENST00000414887 PDE4DIPQ5VU43 2346 aa0.59□□□□□ -2.32
SNX3P1X-201ENST00000414887 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.32
SNX3P1X-201ENST00000414887 KIAA1210Q9ULL0 1709 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 RGS12O14924 1447 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 KDM6BO15054 1643 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 LTBP4Q8N2S1 1624 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 ZNF281Q9Y2X9 895 aa0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 EP300Q09472 2414 aaPredicted RBP0.58□□□□□ -2.32
SNX3P1X-201ENST00000414887 CEP295Q9C0D2 2601 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 BOD1L1Q8NFC6 3051 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 FBN2P35556 2912 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 KCNQ2O43526 872 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 SHOX2O60902 331 aaPredicted RBP0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 CCR10P46092 362 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 HIST2H2BCQ6DN03 193 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 HIST2H2BDQ6DRA6 164 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms