RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NUP153P49790 1475 aaKnown RBP27.36■■□□□ 1.97
CPNE1-208ENST00000414711 HECW1Q76N89 1606 aa27.35■■□□□ 1.97
CPNE1-208ENST00000414711 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
CPNE1-208ENST00000414711 UHRF1BP1Q6BDS2 1440 aa27.33■■□□□ 1.96
CPNE1-208ENST00000414711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.31■■□□□ 1.961e-38■■□□□ 13.2
CPNE1-208ENST00000414711 PTPRTO14522 1441 aa27.3■■□□□ 1.96
CPNE1-208ENST00000414711 CEBPAP49715 358 aaPredicted RBP27.29■■□□□ 1.96
CPNE1-208ENST00000414711 IQSEC2Q5JU85 1478 aa27.28■■□□□ 1.96
CPNE1-208ENST00000414711 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
CPNE1-208ENST00000414711 C9orf84Q5VXU9 1444 aa27.26■■□□□ 1.95
CPNE1-208ENST00000414711 ATP10AO60312 1499 aa27.25■■□□□ 1.95
CPNE1-208ENST00000414711 PLEKHD1A6NEE1 506 aa27.23■■□□□ 1.95
CPNE1-208ENST00000414711 SCAPERQ9BY12 1400 aa27.2■■□□□ 1.94
CPNE1-208ENST00000414711 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
CPNE1-208ENST00000414711 PLCH2O75038 1416 aa27.09■■□□□ 1.93
CPNE1-208ENST00000414711 NCOA1Q15788 1441 aa27.09■■□□□ 1.93
CPNE1-208ENST00000414711 C3P01024 1663 aa27.08■■□□□ 1.92
CPNE1-208ENST00000414711 ZNF518AQ6AHZ1 1483 aa27.02■■□□□ 1.92
CPNE1-208ENST00000414711 UBAP1LF5GYI3 381 aa27.02■■□□□ 1.92
CPNE1-208ENST00000414711 TRAPPC8Q9Y2L5 1435 aa27.01■■□□□ 1.91
CPNE1-208ENST00000414711 KDM5CP41229 1560 aa27■■□□□ 1.91
CPNE1-208ENST00000414711 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
CPNE1-208ENST00000414711 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
CPNE1-208ENST00000414711 CDK13Q14004 1512 aaKnown RBP26.99■■□□□ 1.91
CPNE1-208ENST00000414711 MYO5CQ9NQX4 1742 aa26.97■■□□□ 1.91
CPNE1-208ENST00000414711 RANGAP1P46060 587 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-208ENST00000414711 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-208ENST00000414711 EFCAB2Q5VUJ9 269 aa26.96■■□□□ 1.91
CPNE1-208ENST00000414711 CAMSAP1Q5T5Y3 1602 aa26.95■■□□□ 1.91
CPNE1-208ENST00000414711 ZNF335Q9H4Z2 1342 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-208ENST00000414711 ESF1Q9H501 851 aaKnown RBP26.92■■□□□ 1.9
CPNE1-208ENST00000414711 ABCA6Q8N139 1617 aa26.91■■□□□ 1.9
CPNE1-208ENST00000414711 AGLP35573 1532 aa26.9■■□□□ 1.9
CPNE1-208ENST00000414711 AFAP1Q8N556 730 aa26.9■■□□□ 1.9
CPNE1-208ENST00000414711 MYT1LQ9UL68 1186 aa26.9■■□□□ 1.9
CPNE1-208ENST00000414711 CNTLNQ9NXG0 1405 aa26.87■■□□□ 1.89
CPNE1-208ENST00000414711 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
CPNE1-208ENST00000414711 NPATQ14207 1427 aa26.83■■□□□ 1.89
CPNE1-208ENST00000414711 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
CPNE1-208ENST00000414711 NCKAP5LQ9HCH0 1330 aa26.83■■□□□ 1.89
CPNE1-208ENST00000414711 KIF14Q15058 1648 aa26.83■■□□□ 1.88
CPNE1-208ENST00000414711 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
CPNE1-208ENST00000414711 HSPA1LP34931 641 aa26.8■■□□□ 1.88
CPNE1-208ENST00000414711 PLA2R1Q13018 1463 aa26.78■■□□□ 1.88
CPNE1-208ENST00000414711 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
CPNE1-208ENST00000414711 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
CPNE1-208ENST00000414711 ZNF142P52746 1687 aaPredicted RBP26.75■■□□□ 1.87
CPNE1-208ENST00000414711 PKD2Q13563 968 aa26.74■■□□□ 1.87
CPNE1-208ENST00000414711 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
CPNE1-208ENST00000414711 MYO3AQ8NEV4 1616 aa26.73■■□□□ 1.87
CPNE1-208ENST00000414711 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-208ENST00000414711 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
CPNE1-208ENST00000414711 ABCC1P33527 1531 aa26.7■■□□□ 1.86
CPNE1-208ENST00000414711 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-208ENST00000414711 CDK11AQ9UQ88 783 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-208ENST00000414711 CEP170BQ9Y4F5 1589 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-208ENST00000414711 ZMYM3Q14202 1370 aa26.69■■□□□ 1.86
CPNE1-208ENST00000414711 SUPT6HQ7KZ85 1726 aaKnown RBP26.68■■□□□ 1.86
CPNE1-208ENST00000414711 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
CPNE1-208ENST00000414711 PPP6R1Q9UPN7 881 aa26.67■■□□□ 1.86
CPNE1-208ENST00000414711 ITSN2Q9NZM3 1697 aa26.66■■□□□ 1.86
CPNE1-208ENST00000414711 CLIP1P30622 1438 aa26.65■■□□□ 1.86
CPNE1-208ENST00000414711 CDC42BPBQ9Y5S2 1711 aa26.65■■□□□ 1.86
CPNE1-208ENST00000414711 ATP1B4Q9UN42 357 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-208ENST00000414711 TOM1O60784 492 aa26.64■■□□□ 1.86
CPNE1-208ENST00000414711 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
CPNE1-208ENST00000414711 CPS1P31327 1500 aa26.61■■□□□ 1.85
CPNE1-208ENST00000414711 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
CPNE1-208ENST00000414711 CLTCQ00610 1675 aaKnown RBP26.59■■□□□ 1.85
CPNE1-208ENST00000414711 PTPRKQ15262 1439 aa26.58■■□□□ 1.85
CPNE1-208ENST00000414711 EEA1Q15075 1411 aa26.57■■□□□ 1.84
CPNE1-208ENST00000414711 SAMD9LQ8IVG5 1584 aa26.53■■□□□ 1.84
CPNE1-208ENST00000414711 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
CPNE1-208ENST00000414711 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
CPNE1-208ENST00000414711 POLR1AO95602 1720 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-208ENST00000414711 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
CPNE1-208ENST00000414711 NEURL4Q96JN8 1562 aa26.49■■□□□ 1.83
CPNE1-208ENST00000414711 DNMT1P26358 1616 aaKnown RBP26.48■■□□□ 1.83
CPNE1-208ENST00000414711 PLXNC1O60486 1568 aa26.48■■□□□ 1.83
CPNE1-208ENST00000414711 LRRIQ1Q96JM4 1722 aa26.48■■□□□ 1.83
CPNE1-208ENST00000414711 ARHGAP35Q9NRY4 1499 aa26.44■■□□□ 1.82
CPNE1-208ENST00000414711 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
CPNE1-208ENST00000414711 SPAG9O60271 1321 aaKnown RBP26.42■■□□□ 1.82
CPNE1-208ENST00000414711 ATP7AQ04656 1500 aa26.42■■□□□ 1.82
CPNE1-208ENST00000414711 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
CPNE1-208ENST00000414711 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
CPNE1-208ENST00000414711 A2MP01023 1474 aa26.4■■□□□ 1.82
CPNE1-208ENST00000414711 INO80Q9ULG1 1556 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-208ENST00000414711 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-208ENST00000414711 GGT6Q6P531 493 aa26.37■■□□□ 1.81
CPNE1-208ENST00000414711 RGS17Q9UGC6 210 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-208ENST00000414711 ZNF777Q9ULD5 760 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-208ENST00000414711 RNF17Q9BXT8 1623 aaKnown RBP26.32■■□□□ 1.8
CPNE1-208ENST00000414711 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
CPNE1-208ENST00000414711 TNRQ92752 1358 aa26.3■■□□□ 1.8
CPNE1-208ENST00000414711 HNRNPMP52272 730 aaKnown RBP eCLIP26.29■■□□□ 1.81e-7■■■■□ 25.4
CPNE1-208ENST00000414711 ANKLE2Q86XL3 938 aa26.27■■□□□ 1.8
CPNE1-208ENST00000414711 NPHP4O75161 1426 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-208ENST00000414711 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
CPNE1-208ENST00000414711 SYNMO15061 1565 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms