RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
SNHG17-202ENST00000414142 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
SNHG17-202ENST00000414142 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
SNHG17-202ENST00000414142 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
SNHG17-202ENST00000414142 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
SNHG17-202ENST00000414142 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
SNHG17-202ENST00000414142 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
SNHG17-202ENST00000414142 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
SNHG17-202ENST00000414142 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
SNHG17-202ENST00000414142 KDM6BO15054 1643 aa19.9■□□□□ 0.78
SNHG17-202ENST00000414142 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
SNHG17-202ENST00000414142 ZCCHC11Q5TAX3 1644 aaKnown RBP19.88■□□□□ 0.77
SNHG17-202ENST00000414142 KCNH8Q96L42 1107 aa19.86■□□□□ 0.77
SNHG17-202ENST00000414142 CROCC2H7BZ55 1655 aa19.86■□□□□ 0.77
SNHG17-202ENST00000414142 ADGBQ8N7X0 1667 aa19.86■□□□□ 0.77
SNHG17-202ENST00000414142 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
SNHG17-202ENST00000414142 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
SNHG17-202ENST00000414142 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SNHG17-202ENST00000414142 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
SNHG17-202ENST00000414142 CDC42BPBQ9Y5S2 1711 aa19.84■□□□□ 0.77
SNHG17-202ENST00000414142 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
SNHG17-202ENST00000414142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.768e-6■□□□□ 8.1
SNHG17-202ENST00000414142 ANKRD30AQ9BXX3 1397 aa19.82■□□□□ 0.76
SNHG17-202ENST00000414142 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
SNHG17-202ENST00000414142 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.766e-8■■■■□ 20.7
SNHG17-202ENST00000414142 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
SNHG17-202ENST00000414142 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
SNHG17-202ENST00000414142 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
SNHG17-202ENST00000414142 MPHOSPH9Q99550 1183 aa19.8■□□□□ 0.76
SNHG17-202ENST00000414142 ARHGAP5Q13017 1502 aa19.79■□□□□ 0.76
SNHG17-202ENST00000414142 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
SNHG17-202ENST00000414142 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
SNHG17-202ENST00000414142 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
SNHG17-202ENST00000414142 C9orf84Q5VXU9 1444 aa19.77■□□□□ 0.76
SNHG17-202ENST00000414142 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
SNHG17-202ENST00000414142 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
SNHG17-202ENST00000414142 MBD5Q9P267 1494 aa19.75■□□□□ 0.75
SNHG17-202ENST00000414142 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
SNHG17-202ENST00000414142 DENND4BO75064 1496 aaPredicted RBP19.74■□□□□ 0.75
SNHG17-202ENST00000414142 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
SNHG17-202ENST00000414142 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
SNHG17-202ENST00000414142 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
SNHG17-202ENST00000414142 ANKRD50Q9ULJ7 1429 aa19.71■□□□□ 0.75
SNHG17-202ENST00000414142 SYCP2Q9BX26 1530 aa19.7■□□□□ 0.74
SNHG17-202ENST00000414142 PLCH2O75038 1416 aa19.7■□□□□ 0.74
SNHG17-202ENST00000414142 FOXD1Q16676 465 aa19.7■□□□□ 0.74
SNHG17-202ENST00000414142 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
SNHG17-202ENST00000414142 EFCAB2Q5VUJ9 269 aa19.69■□□□□ 0.74
SNHG17-202ENST00000414142 WDR7Q9Y4E6 1490 aa19.68■□□□□ 0.74
SNHG17-202ENST00000414142 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
SNHG17-202ENST00000414142 KIAA1107Q9UPP5 1409 aa19.66■□□□□ 0.74
SNHG17-202ENST00000414142 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNHG17-202ENST00000414142 PZPP20742 1482 aa19.64■□□□□ 0.73
SNHG17-202ENST00000414142 ANKRD30BQ9BXX2 1392 aa19.63■□□□□ 0.73
SNHG17-202ENST00000414142 ASXL2Q76L83 1435 aa19.62■□□□□ 0.73
SNHG17-202ENST00000414142 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
SNHG17-202ENST00000414142 ARHGEF12Q9NZN5 1544 aa19.6■□□□□ 0.73
SNHG17-202ENST00000414142 NUP155O75694 1391 aa19.6■□□□□ 0.73
SNHG17-202ENST00000414142 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
SNHG17-202ENST00000414142 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
SNHG17-202ENST00000414142 ABCC1P33527 1531 aa19.58■□□□□ 0.72
SNHG17-202ENST00000414142 PKD2Q13563 968 aa19.58■□□□□ 0.72
SNHG17-202ENST00000414142 ABCA9Q8IUA7 1624 aa19.57■□□□□ 0.72
SNHG17-202ENST00000414142 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
SNHG17-202ENST00000414142 MIER1Q8N108 512 aa19.54■□□□□ 0.72
SNHG17-202ENST00000414142 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
SNHG17-202ENST00000414142 TRAPPC8Q9Y2L5 1435 aa19.54■□□□□ 0.72
SNHG17-202ENST00000414142 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
SNHG17-202ENST00000414142 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
SNHG17-202ENST00000414142 FANCAO15360 1455 aa19.53■□□□□ 0.72
SNHG17-202ENST00000414142 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
SNHG17-202ENST00000414142 SPAG9O60271 1321 aaKnown RBP19.5■□□□□ 0.71
SNHG17-202ENST00000414142 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
SNHG17-202ENST00000414142 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
SNHG17-202ENST00000414142 HIRIP3Q9BW71 556 aaPredicted RBP19.48■□□□□ 0.71
SNHG17-202ENST00000414142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.711e-6■□□□□ 9.2
SNHG17-202ENST00000414142 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
SNHG17-202ENST00000414142 ADGRL1O94910 1474 aa19.45■□□□□ 0.7
SNHG17-202ENST00000414142 TEX14Q8IWB6 1497 aa19.45■□□□□ 0.7
SNHG17-202ENST00000414142 UNC13BO14795 1591 aa19.45■□□□□ 0.7
SNHG17-202ENST00000414142 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
SNHG17-202ENST00000414142 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
SNHG17-202ENST00000414142 SCAPERQ9BY12 1400 aa19.44■□□□□ 0.7
SNHG17-202ENST00000414142 MYT1LQ9UL68 1186 aa19.43■□□□□ 0.7
SNHG17-202ENST00000414142 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
SNHG17-202ENST00000414142 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
SNHG17-202ENST00000414142 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
SNHG17-202ENST00000414142 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.7
SNHG17-202ENST00000414142 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
SNHG17-202ENST00000414142 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 IQGAP3Q86VI3 1631 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
SNHG17-202ENST00000414142 CFAP74Q9C0B2 1584 aa19.36■□□□□ 0.69
SNHG17-202ENST00000414142 INO80Q9ULG1 1556 aaPredicted RBP19.36■□□□□ 0.69
SNHG17-202ENST00000414142 EIF4G2P78344 907 aaKnown RBP eCLIP19.36■□□□□ 0.693e-13■■■■□ 22.9
SNHG17-202ENST00000414142 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
SNHG17-202ENST00000414142 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms