RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 KIF14Q15058 1648 aa30.15■■■□□ 2.42
SLC13A3-204ENST00000413164 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.41
SLC13A3-204ENST00000413164 GPATCH8Q9UKJ3 1502 aaKnown RBP30.13■■■□□ 2.41
SLC13A3-204ENST00000413164 ZNF644Q9H582 1327 aaPredicted RBP30.12■■■□□ 2.41
SLC13A3-204ENST00000413164 PPP1R15AO75807 674 aaPredicted RBP30.12■■■□□ 2.41
SLC13A3-204ENST00000413164 DENND4BO75064 1496 aaPredicted RBP30.11■■■□□ 2.41
SLC13A3-204ENST00000413164 ATP10BO94823 1461 aa30.11■■■□□ 2.41
SLC13A3-204ENST00000413164 ABCC2Q92887 1545 aa30.11■■■□□ 2.41
SLC13A3-204ENST00000413164 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
SLC13A3-204ENST00000413164 RIMBP3BA6NNM3 1639 aa30.1■■■□□ 2.41
SLC13A3-204ENST00000413164 RIMBP3Q9UFD9 1639 aa30.1■■■□□ 2.41
SLC13A3-204ENST00000413164 CENPBP07199 599 aaPredicted RBP30.09■■■□□ 2.41
SLC13A3-204ENST00000413164 CAMSAP2Q08AD1 1489 aa30.08■■■□□ 2.41
SLC13A3-204ENST00000413164 SCAF1Q9H7N4 1312 aaKnown RBP30.08■■■□□ 2.41
SLC13A3-204ENST00000413164 UHRF1BP1LA0JNW5 1464 aa30.04■■■□□ 2.4
SLC13A3-204ENST00000413164 CFDP1Q9UEE9 299 aaPredicted RBP30.03■■■□□ 2.4
SLC13A3-204ENST00000413164 TONSLQ96HA7 1378 aa30.03■■■□□ 2.4
SLC13A3-204ENST00000413164 ABCC10Q5T3U5 1492 aa30.02■■■□□ 2.4
SLC13A3-204ENST00000413164 CYB5RLQ6IPT4 315 aa30.01■■■□□ 2.4
SLC13A3-204ENST00000413164 PLEKHD1A6NEE1 506 aa30■■■□□ 2.39
SLC13A3-204ENST00000413164 CDC42BPAQ5VT25 1732 aa29.99■■■□□ 2.39
SLC13A3-204ENST00000413164 KDM5BQ9UGL1 1544 aa29.98■■■□□ 2.39
SLC13A3-204ENST00000413164 CROCC2H7BZ55 1655 aa29.97■■■□□ 2.39
SLC13A3-204ENST00000413164 TRIM52Q96A61 297 aa29.95■■■□□ 2.39
SLC13A3-204ENST00000413164 ADGBQ8N7X0 1667 aa29.95■■■□□ 2.38
SLC13A3-204ENST00000413164 ADGRL2O95490 1459 aa29.94■■■□□ 2.38
SLC13A3-204ENST00000413164 MPHOSPH9Q99550 1183 aa29.94■■■□□ 2.38
SLC13A3-204ENST00000413164 ZCCHC11Q5TAX3 1644 aaKnown RBP29.92■■■□□ 2.38
SLC13A3-204ENST00000413164 NCOA1Q15788 1441 aa29.92■■■□□ 2.38
SLC13A3-204ENST00000413164 NPM1P06748 294 aaKnown RBP eCLIP29.9■■■□□ 2.38
SLC13A3-204ENST00000413164 YTHDC1Q96MU7 727 aaKnown RBP29.85■■■□□ 2.37
SLC13A3-204ENST00000413164 ZNF777Q9ULD5 760 aaPredicted RBP29.84■■■□□ 2.37
SLC13A3-204ENST00000413164 SHANK2Q9UPX8 1470 aa29.83■■■□□ 2.37
SLC13A3-204ENST00000413164 ANKRD30BQ9BXX2 1392 aa29.8■■■□□ 2.36
SLC13A3-204ENST00000413164 ANKRD30AQ9BXX3 1397 aa29.78■■■□□ 2.36
SLC13A3-204ENST00000413164 KCNH8Q96L42 1107 aa29.78■■■□□ 2.36
SLC13A3-204ENST00000413164 PZPP20742 1482 aa29.77■■■□□ 2.36
SLC13A3-204ENST00000413164 PREX2Q70Z35 1606 aa29.75■■■□□ 2.35
SLC13A3-204ENST00000413164 ARHGEF5Q12774 1597 aa29.75■■■□□ 2.35
SLC13A3-204ENST00000413164 RPRD2Q5VT52 1461 aaKnown RBP29.74■■■□□ 2.35
SLC13A3-204ENST00000413164 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
SLC13A3-204ENST00000413164 FOXD1Q16676 465 aa29.73■■■□□ 2.35
SLC13A3-204ENST00000413164 C9orf84Q5VXU9 1444 aa29.72■■■□□ 2.35
SLC13A3-204ENST00000413164 MBD5Q9P267 1494 aa29.72■■■□□ 2.35
SLC13A3-204ENST00000413164 ASXL2Q76L83 1435 aa29.71■■■□□ 2.35
SLC13A3-204ENST00000413164 SLC4A1APQ9BWU0 796 aaKnown RBP29.71■■■□□ 2.35
SLC13A3-204ENST00000413164 SAMD9LQ8IVG5 1584 aa29.7■■■□□ 2.34
SLC13A3-204ENST00000413164 WDR7Q9Y4E6 1490 aa29.69■■■□□ 2.34
SLC13A3-204ENST00000413164 ANKRD50Q9ULJ7 1429 aa29.69■■■□□ 2.34
SLC13A3-204ENST00000413164 DDX10Q13206 875 aaKnown RBP29.68■■■□□ 2.34
SLC13A3-204ENST00000413164 HIRIP3Q9BW71 556 aaPredicted RBP29.68■■■□□ 2.34
SLC13A3-204ENST00000413164 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
SLC13A3-204ENST00000413164 GTF3C3Q9Y5Q9 886 aa29.67■■■□□ 2.34
SLC13A3-204ENST00000413164 TEX14Q8IWB6 1497 aa29.66■■■□□ 2.34
SLC13A3-204ENST00000413164 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
SLC13A3-204ENST00000413164 L3MBTL2Q969R5 705 aa29.65■■■□□ 2.34
SLC13A3-204ENST00000413164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.65■■■□□ 2.34
SLC13A3-204ENST00000413164 CCDC141Q6ZP82 1450 aa29.61■■■□□ 2.33
SLC13A3-204ENST00000413164 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
SLC13A3-204ENST00000413164 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
SLC13A3-204ENST00000413164 KIAA1107Q9UPP5 1409 aa29.6■■■□□ 2.33
SLC13A3-204ENST00000413164 HNRNPMP52272 730 aaKnown RBP eCLIP29.6■■■□□ 2.333e-6■■■■□ 21.2
SLC13A3-204ENST00000413164 KDM5DQ9BY66 1539 aa29.58■■■□□ 2.33
SLC13A3-204ENST00000413164 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
SLC13A3-204ENST00000413164 MYO5CQ9NQX4 1742 aa29.55■■■□□ 2.32
SLC13A3-204ENST00000413164 KIF15Q9NS87 1388 aa29.55■■■□□ 2.32
SLC13A3-204ENST00000413164 ARHGAP5Q13017 1502 aa29.53■■■□□ 2.32
SLC13A3-204ENST00000413164 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
SLC13A3-204ENST00000413164 SYCP2Q9BX26 1530 aa29.52■■■□□ 2.32
SLC13A3-204ENST00000413164 PKD2Q13563 968 aa29.49■■■□□ 2.31
SLC13A3-204ENST00000413164 NUP155O75694 1391 aa29.48■■■□□ 2.31
SLC13A3-204ENST00000413164 HSPA5P11021 654 aaKnown RBP29.48■■■□□ 2.31
SLC13A3-204ENST00000413164 PLEKHH2Q8IVE3 1493 aa29.47■■■□□ 2.31
SLC13A3-204ENST00000413164 NBPF8Q3BBV2 869 aa29.47■■■□□ 2.31
SLC13A3-204ENST00000413164 EIF4G2P78344 907 aaKnown RBP eCLIP29.45■■■□□ 2.312e-8■■■■■ 35.8
SLC13A3-204ENST00000413164 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.31
SLC13A3-204ENST00000413164 PLCH2O75038 1416 aa29.43■■■□□ 2.3
SLC13A3-204ENST00000413164 PLXNC1O60486 1568 aa29.4■■■□□ 2.3
SLC13A3-204ENST00000413164 WASHC2AQ641Q2 1341 aa29.39■■■□□ 2.3
SLC13A3-204ENST00000413164 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
SLC13A3-204ENST00000413164 CCER2I3L3R5 266 aa29.38■■■□□ 2.29
SLC13A3-204ENST00000413164 EFCAB2Q5VUJ9 269 aa29.37■■■□□ 2.29
SLC13A3-204ENST00000413164 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
SLC13A3-204ENST00000413164 ANP32CO43423 234 aa29.37■■■□□ 2.29
SLC13A3-204ENST00000413164 FAM69CQ0P6D2 419 aa29.37■■■□□ 2.29
SLC13A3-204ENST00000413164 CD109Q6YHK3 1445 aa29.36■■■□□ 2.29
SLC13A3-204ENST00000413164 UNC13BO14795 1591 aa29.35■■■□□ 2.29
SLC13A3-204ENST00000413164 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
SLC13A3-204ENST00000413164 ABCC1P33527 1531 aa29.32■■■□□ 2.28
SLC13A3-204ENST00000413164 ARAP3Q8WWN8 1544 aa29.32■■■□□ 2.28
SLC13A3-204ENST00000413164 DIP2BQ9P265 1576 aa29.31■■■□□ 2.28
SLC13A3-204ENST00000413164 GLI2P10070 1586 aa29.29■■■□□ 2.28
SLC13A3-204ENST00000413164 FANCAO15360 1455 aa29.28■■■□□ 2.28
SLC13A3-204ENST00000413164 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
SLC13A3-204ENST00000413164 DUOX2Q9NRD8 1548 aa29.27■■■□□ 2.28
SLC13A3-204ENST00000413164 POLR1AO95602 1720 aaPredicted RBP29.26■■■□□ 2.28
SLC13A3-204ENST00000413164 C11orf95C9JLR9 678 aaPredicted RBP29.25■■■□□ 2.27
SLC13A3-204ENST00000413164 MAP3K4Q9Y6R4 1608 aa29.25■■■□□ 2.27
SLC13A3-204ENST00000413164 CCDC7Q96M83 1385 aa29.24■■■□□ 2.27
SLC13A3-204ENST00000413164 IQGAP3Q86VI3 1631 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms