RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 UGGT2Q9NYU1 1516 aa14.06□□□□□ -0.16
LINC00476-202ENST00000412446 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
LINC00476-202ENST00000412446 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
LINC00476-202ENST00000412446 TTC37Q6PGP7 1564 aa14.05□□□□□ -0.16
LINC00476-202ENST00000412446 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
LINC00476-202ENST00000412446 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
LINC00476-202ENST00000412446 DISP1Q96F81 1524 aa14.01□□□□□ -0.17
LINC00476-202ENST00000412446 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
LINC00476-202ENST00000412446 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
LINC00476-202ENST00000412446 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
LINC00476-202ENST00000412446 GOLGA3Q08378 1498 aa14□□□□□ -0.17
LINC00476-202ENST00000412446 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
LINC00476-202ENST00000412446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
LINC00476-202ENST00000412446 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
LINC00476-202ENST00000412446 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
LINC00476-202ENST00000412446 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
LINC00476-202ENST00000412446 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
LINC00476-202ENST00000412446 EEA1Q15075 1411 aa13.93□□□□□ -0.18
LINC00476-202ENST00000412446 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
LINC00476-202ENST00000412446 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
LINC00476-202ENST00000412446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
LINC00476-202ENST00000412446 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
LINC00476-202ENST00000412446 ZNF335Q9H4Z2 1342 aaPredicted RBP13.9□□□□□ -0.18
LINC00476-202ENST00000412446 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
LINC00476-202ENST00000412446 CEBPAP49715 358 aaPredicted RBP13.9□□□□□ -0.18
LINC00476-202ENST00000412446 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
LINC00476-202ENST00000412446 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.19
LINC00476-202ENST00000412446 POGZQ7Z3K3 1410 aa13.9□□□□□ -0.19
LINC00476-202ENST00000412446 FANCAO15360 1455 aa13.89□□□□□ -0.19
LINC00476-202ENST00000412446 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
LINC00476-202ENST00000412446 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
LINC00476-202ENST00000412446 ABCA8O94911 1581 aa13.87□□□□□ -0.19
LINC00476-202ENST00000412446 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
LINC00476-202ENST00000412446 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
LINC00476-202ENST00000412446 PIP4K2BP78356 416 aa13.85□□□□□ -0.19
LINC00476-202ENST00000412446 MLECQ14165 292 aa13.84□□□□□ -0.19
LINC00476-202ENST00000412446 NEO1Q92859 1461 aa13.84□□□□□ -0.19
LINC00476-202ENST00000412446 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
LINC00476-202ENST00000412446 ABCA9Q8IUA7 1624 aa13.82□□□□□ -0.2
LINC00476-202ENST00000412446 SAMD9Q5K651 1589 aa13.81□□□□□ -0.2
LINC00476-202ENST00000412446 ALKQ9UM73 1620 aa13.81□□□□□ -0.2
LINC00476-202ENST00000412446 AKNAQ7Z591 1439 aa13.8□□□□□ -0.2
LINC00476-202ENST00000412446 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
LINC00476-202ENST00000412446 FHOD3Q2V2M9 1422 aa13.75□□□□□ -0.21
LINC00476-202ENST00000412446 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
LINC00476-202ENST00000412446 ZFYVE16Q7Z3T8 1539 aa13.74□□□□□ -0.21
LINC00476-202ENST00000412446 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00476-202ENST00000412446 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
LINC00476-202ENST00000412446 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
LINC00476-202ENST00000412446 TOM1O60784 492 aa13.73□□□□□ -0.21
LINC00476-202ENST00000412446 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
LINC00476-202ENST00000412446 C3P01024 1663 aa13.72□□□□□ -0.21
LINC00476-202ENST00000412446 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
LINC00476-202ENST00000412446 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
LINC00476-202ENST00000412446 ATP10BO94823 1461 aa13.69□□□□□ -0.22
LINC00476-202ENST00000412446 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
LINC00476-202ENST00000412446 NUP153P49790 1475 aaKnown RBP13.64□□□□□ -0.23
LINC00476-202ENST00000412446 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
LINC00476-202ENST00000412446 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
LINC00476-202ENST00000412446 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
LINC00476-202ENST00000412446 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
LINC00476-202ENST00000412446 CPS1P31327 1500 aa13.6□□□□□ -0.23
LINC00476-202ENST00000412446 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
LINC00476-202ENST00000412446 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
LINC00476-202ENST00000412446 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
LINC00476-202ENST00000412446 ATP10AO60312 1499 aa13.59□□□□□ -0.23
LINC00476-202ENST00000412446 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
LINC00476-202ENST00000412446 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
LINC00476-202ENST00000412446 APLP2Q06481 763 aa13.57□□□□□ -0.24
LINC00476-202ENST00000412446 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
LINC00476-202ENST00000412446 PLEKHD1A6NEE1 506 aa13.56□□□□□ -0.24
LINC00476-202ENST00000412446 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
LINC00476-202ENST00000412446 PKD2Q13563 968 aa13.55□□□□□ -0.24
LINC00476-202ENST00000412446 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
LINC00476-202ENST00000412446 SHANK2Q9UPX8 1470 aa13.53□□□□□ -0.24
LINC00476-202ENST00000412446 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
LINC00476-202ENST00000412446 ZNF142P52746 1687 aaPredicted RBP13.52□□□□□ -0.25
LINC00476-202ENST00000412446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00476-202ENST00000412446 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
LINC00476-202ENST00000412446 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
LINC00476-202ENST00000412446 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
LINC00476-202ENST00000412446 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
LINC00476-202ENST00000412446 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
LINC00476-202ENST00000412446 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
LINC00476-202ENST00000412446 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
LINC00476-202ENST00000412446 NPATQ14207 1427 aa13.47□□□□□ -0.25
LINC00476-202ENST00000412446 PROM2Q8N271 834 aa13.46□□□□□ -0.25
LINC00476-202ENST00000412446 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
LINC00476-202ENST00000412446 PLCH2O75038 1416 aa13.46□□□□□ -0.26
LINC00476-202ENST00000412446 CLIP1P30622 1438 aa13.46□□□□□ -0.26
LINC00476-202ENST00000412446 KIF14Q15058 1648 aa13.46□□□□□ -0.26
LINC00476-202ENST00000412446 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.26
LINC00476-202ENST00000412446 NEURL4Q96JN8 1562 aa13.45□□□□□ -0.26
LINC00476-202ENST00000412446 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
LINC00476-202ENST00000412446 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
LINC00476-202ENST00000412446 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
LINC00476-202ENST00000412446 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
LINC00476-202ENST00000412446 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
LINC00476-202ENST00000412446 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
LINC00476-202ENST00000412446 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms