RNA–Protein interactions for RNA: ENST00000411649.3

NELFA-204, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-204ENST00000411649 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
NELFA-204ENST00000411649 ZMYM4Q5VZL5 1548 aa19.58■□□□□ 0.73
NELFA-204ENST00000411649 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
NELFA-204ENST00000411649 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
NELFA-204ENST00000411649 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
NELFA-204ENST00000411649 CDK13Q14004 1512 aaKnown RBP19.57■□□□□ 0.72
NELFA-204ENST00000411649 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
NELFA-204ENST00000411649 CFAP74Q9C0B2 1584 aa19.55■□□□□ 0.72
NELFA-204ENST00000411649 MAGI2Q86UL8 1455 aa19.52■□□□□ 0.72
NELFA-204ENST00000411649 PLCH2O75038 1416 aa19.51■□□□□ 0.71
NELFA-204ENST00000411649 ATP10AO60312 1499 aa19.51■□□□□ 0.71
NELFA-204ENST00000411649 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
NELFA-204ENST00000411649 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
NELFA-204ENST00000411649 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
NELFA-204ENST00000411649 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
NELFA-204ENST00000411649 EFCAB2Q5VUJ9 269 aa19.47■□□□□ 0.71
NELFA-204ENST00000411649 STRCQ7RTU9 1775 aa19.45■□□□□ 0.7
NELFA-204ENST00000411649 SOCS7O14512 581 aa19.45■□□□□ 0.7
NELFA-204ENST00000411649 PREX1Q8TCU6 1659 aa19.44■□□□□ 0.7
NELFA-204ENST00000411649 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
NELFA-204ENST00000411649 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
NELFA-204ENST00000411649 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
NELFA-204ENST00000411649 KIF14Q15058 1648 aa19.4■□□□□ 0.7
NELFA-204ENST00000411649 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
NELFA-204ENST00000411649 ARHGAP5Q13017 1502 aa19.37■□□□□ 0.69
NELFA-204ENST00000411649 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
NELFA-204ENST00000411649 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
NELFA-204ENST00000411649 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
NELFA-204ENST00000411649 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
NELFA-204ENST00000411649 DIP2CQ9Y2E4 1556 aa19.32■□□□□ 0.68
NELFA-204ENST00000411649 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
NELFA-204ENST00000411649 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
NELFA-204ENST00000411649 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
NELFA-204ENST00000411649 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
NELFA-204ENST00000411649 KDM5CP41229 1560 aa19.31■□□□□ 0.68
NELFA-204ENST00000411649 C3P01024 1663 aa19.3■□□□□ 0.68
NELFA-204ENST00000411649 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
NELFA-204ENST00000411649 PTPRTO14522 1441 aa19.3■□□□□ 0.68
NELFA-204ENST00000411649 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
NELFA-204ENST00000411649 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
NELFA-204ENST00000411649 LTBP4Q8N2S1 1624 aa19.28■□□□□ 0.68
NELFA-204ENST00000411649 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
NELFA-204ENST00000411649 CLIP1P30622 1438 aa19.25■□□□□ 0.67
NELFA-204ENST00000411649 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
NELFA-204ENST00000411649 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
NELFA-204ENST00000411649 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
NELFA-204ENST00000411649 LRRIQ1Q96JM4 1722 aa19.23■□□□□ 0.67
NELFA-204ENST00000411649 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
NELFA-204ENST00000411649 ZNF335Q9H4Z2 1342 aaPredicted RBP19.23■□□□□ 0.67
NELFA-204ENST00000411649 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
NELFA-204ENST00000411649 REREQ9P2R6 1566 aa19.21■□□□□ 0.67
NELFA-204ENST00000411649 AGLP35573 1532 aa19.2■□□□□ 0.66
NELFA-204ENST00000411649 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
NELFA-204ENST00000411649 ABCC1P33527 1531 aa19.19■□□□□ 0.66
NELFA-204ENST00000411649 KIDINS220Q9ULH0 1771 aa19.17■□□□□ 0.66
NELFA-204ENST00000411649 ZMYM3Q14202 1370 aa19.17■□□□□ 0.66
NELFA-204ENST00000411649 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■□ 23.8
NELFA-204ENST00000411649 ITSN2Q9NZM3 1697 aa19.16■□□□□ 0.66
NELFA-204ENST00000411649 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
NELFA-204ENST00000411649 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
NELFA-204ENST00000411649 CNTLNQ9NXG0 1405 aa19.15■□□□□ 0.66
NELFA-204ENST00000411649 IQSEC2Q5JU85 1478 aa19.12■□□□□ 0.65
NELFA-204ENST00000411649 SPAG9O60271 1321 aaKnown RBP19.12■□□□□ 0.65
NELFA-204ENST00000411649 GGT6Q6P531 493 aa19.11■□□□□ 0.65
NELFA-204ENST00000411649 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
NELFA-204ENST00000411649 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
NELFA-204ENST00000411649 NPATQ14207 1427 aa19.09■□□□□ 0.65
NELFA-204ENST00000411649 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
NELFA-204ENST00000411649 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
NELFA-204ENST00000411649 SYCP2Q9BX26 1530 aa19.08■□□□□ 0.64
NELFA-204ENST00000411649 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
NELFA-204ENST00000411649 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
NELFA-204ENST00000411649 CASKIN1Q8WXD9 1431 aa19.07■□□□□ 0.64
NELFA-204ENST00000411649 HSPA1LP34931 641 aa19.05■□□□□ 0.64
NELFA-204ENST00000411649 PKD2Q13563 968 aa19.05■□□□□ 0.64
NELFA-204ENST00000411649 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
NELFA-204ENST00000411649 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
NELFA-204ENST00000411649 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
NELFA-204ENST00000411649 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
NELFA-204ENST00000411649 GPATCH8Q9UKJ3 1502 aaKnown RBP19.04■□□□□ 0.64
NELFA-204ENST00000411649 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
NELFA-204ENST00000411649 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
NELFA-204ENST00000411649 A2MP01023 1474 aa19.01■□□□□ 0.63
NELFA-204ENST00000411649 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
NELFA-204ENST00000411649 CEP170BQ9Y4F5 1589 aaPredicted RBP19.01■□□□□ 0.63
NELFA-204ENST00000411649 ATP7AQ04656 1500 aa19■□□□□ 0.63
NELFA-204ENST00000411649 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
NELFA-204ENST00000411649 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
NELFA-204ENST00000411649 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
NELFA-204ENST00000411649 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
NELFA-204ENST00000411649 ZNF142P52746 1687 aaPredicted RBP18.97■□□□□ 0.63
NELFA-204ENST00000411649 PLXNC1O60486 1568 aa18.96■□□□□ 0.63
NELFA-204ENST00000411649 CCNB3Q8WWL7 1395 aa18.95■□□□□ 0.62
NELFA-204ENST00000411649 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
NELFA-204ENST00000411649 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
NELFA-204ENST00000411649 KIAA1107Q9UPP5 1409 aa18.93■□□□□ 0.62
NELFA-204ENST00000411649 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
NELFA-204ENST00000411649 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
NELFA-204ENST00000411649 TOM1O60784 492 aa18.92■□□□□ 0.62
NELFA-204ENST00000411649 DNMT1P26358 1616 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms