RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 CDK11AQ9UQ88 783 aaPredicted RBP23.11■■□□□ 1.29
PDK1-203ENST00000410055 CCER2I3L3R5 266 aa23.1■■□□□ 1.29
PDK1-203ENST00000410055 NEFLP07196 543 aa23.09■■□□□ 1.29
PDK1-203ENST00000410055 RTN4Q9NQC3 1192 aaKnown RBP23.09■■□□□ 1.29
PDK1-203ENST00000410055 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
PDK1-203ENST00000410055 ARHGEF11O15085 1522 aa23.08■■□□□ 1.29
PDK1-203ENST00000410055 ZNF326Q5BKZ1 582 aaKnown RBP23.07■■□□□ 1.28
PDK1-203ENST00000410055 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
PDK1-203ENST00000410055 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDK1-203ENST00000410055 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
PDK1-203ENST00000410055 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
PDK1-203ENST00000410055 WDR62O43379 1518 aa23.06■■□□□ 1.28
PDK1-203ENST00000410055 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
PDK1-203ENST00000410055 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
PDK1-203ENST00000410055 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
PDK1-203ENST00000410055 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
PDK1-203ENST00000410055 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
PDK1-203ENST00000410055 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
PDK1-203ENST00000410055 KIAA0586Q9BVV6 1533 aa23.01■■□□□ 1.27
PDK1-203ENST00000410055 DISP1Q96F81 1524 aa23■■□□□ 1.27
PDK1-203ENST00000410055 C11orf95C9JLR9 678 aaPredicted RBP22.99■■□□□ 1.27
PDK1-203ENST00000410055 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
PDK1-203ENST00000410055 DAPK1P53355 1430 aa22.99■■□□□ 1.27
PDK1-203ENST00000410055 NUP153P49790 1475 aaKnown RBP22.99■■□□□ 1.27
PDK1-203ENST00000410055 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
PDK1-203ENST00000410055 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
PDK1-203ENST00000410055 ABCC5O15440 1437 aa22.97■■□□□ 1.27
PDK1-203ENST00000410055 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
PDK1-203ENST00000410055 PLB1Q6P1J6 1458 aa22.96■■□□□ 1.27
PDK1-203ENST00000410055 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
PDK1-203ENST00000410055 NBR1Q14596 966 aa22.96■■□□□ 1.27
PDK1-203ENST00000410055 KIAA0556O60303 1618 aa22.95■■□□□ 1.26
PDK1-203ENST00000410055 CCDC184Q52MB2 194 aa22.95■■□□□ 1.26
PDK1-203ENST00000410055 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
PDK1-203ENST00000410055 IL27Q8NEV9 243 aa22.94■■□□□ 1.26
PDK1-203ENST00000410055 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
PDK1-203ENST00000410055 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
PDK1-203ENST00000410055 EIF5BO60841 1220 aaKnown RBP22.91■■□□□ 1.26
PDK1-203ENST00000410055 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
PDK1-203ENST00000410055 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
PDK1-203ENST00000410055 RAPGEF6Q8TEU7 1601 aa22.89■■□□□ 1.25
PDK1-203ENST00000410055 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
PDK1-203ENST00000410055 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
PDK1-203ENST00000410055 PKD2Q13563 968 aa22.87■■□□□ 1.25
PDK1-203ENST00000410055 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
PDK1-203ENST00000410055 ERICH6BQ5W0A0 696 aa22.86■■□□□ 1.25
PDK1-203ENST00000410055 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
PDK1-203ENST00000410055 FANCIQ9NVI1 1328 aa22.85■■□□□ 1.25
PDK1-203ENST00000410055 TROQ12816 1431 aaPredicted RBP22.84■■□□□ 1.25
PDK1-203ENST00000410055 ROCK1Q13464 1354 aa22.83■■□□□ 1.25
PDK1-203ENST00000410055 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
PDK1-203ENST00000410055 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
PDK1-203ENST00000410055 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
PDK1-203ENST00000410055 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
PDK1-203ENST00000410055 DNMT1P26358 1616 aaKnown RBP22.8■■□□□ 1.24
PDK1-203ENST00000410055 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
PDK1-203ENST00000410055 RPRD2Q5VT52 1461 aaKnown RBP22.79■■□□□ 1.24
PDK1-203ENST00000410055 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.243e-8■■■■■ 32.4
PDK1-203ENST00000410055 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
PDK1-203ENST00000410055 KIF7Q2M1P5 1343 aa22.79■■□□□ 1.24
PDK1-203ENST00000410055 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
PDK1-203ENST00000410055 NCOA1Q15788 1441 aa22.77■■□□□ 1.24
PDK1-203ENST00000410055 CNTLNQ9NXG0 1405 aa22.77■■□□□ 1.24
PDK1-203ENST00000410055 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
PDK1-203ENST00000410055 KIF14Q15058 1648 aa22.77■■□□□ 1.24
PDK1-203ENST00000410055 TSPY4P0CV99 314 aa22.77■■□□□ 1.23
PDK1-203ENST00000410055 TSPY10P0CW01 314 aa22.77■■□□□ 1.23
PDK1-203ENST00000410055 PKNOX2Q96KN3 472 aa22.75■■□□□ 1.23
PDK1-203ENST00000410055 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
PDK1-203ENST00000410055 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
PDK1-203ENST00000410055 ANKRD30AQ9BXX3 1397 aa22.74■■□□□ 1.23
PDK1-203ENST00000410055 NUP155O75694 1391 aa22.74■■□□□ 1.23
PDK1-203ENST00000410055 TEX14Q8IWB6 1497 aa22.71■■□□□ 1.23
PDK1-203ENST00000410055 PZPP20742 1482 aa22.71■■□□□ 1.23
PDK1-203ENST00000410055 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
PDK1-203ENST00000410055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.222e-8■□□□□ 10.2
PDK1-203ENST00000410055 KIAA1107Q9UPP5 1409 aa22.65■■□□□ 1.22
PDK1-203ENST00000410055 DCAF11Q8TEB1 546 aa22.65■■□□□ 1.22
PDK1-203ENST00000410055 CARD11Q9BXL7 1154 aa22.65■■□□□ 1.22
PDK1-203ENST00000410055 USP47Q96K76 1375 aa22.65■■□□□ 1.22
PDK1-203ENST00000410055 RGL3Q3MIN7 710 aa22.64■■□□□ 1.21
PDK1-203ENST00000410055 ATP10BO94823 1461 aa22.64■■□□□ 1.21
PDK1-203ENST00000410055 C9orf84Q5VXU9 1444 aa22.61■■□□□ 1.21
PDK1-203ENST00000410055 NUP160Q12769 1436 aa22.6■■□□□ 1.21
PDK1-203ENST00000410055 ITSN2Q9NZM3 1697 aa22.6■■□□□ 1.21
PDK1-203ENST00000410055 PTPRGP23470 1445 aa22.6■■□□□ 1.21
PDK1-203ENST00000410055 SPATA31E1Q6ZUB1 1445 aa22.6■■□□□ 1.21
PDK1-203ENST00000410055 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
PDK1-203ENST00000410055 KIF15Q9NS87 1388 aa22.57■■□□□ 1.2
PDK1-203ENST00000410055 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
PDK1-203ENST00000410055 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
PDK1-203ENST00000410055 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
PDK1-203ENST00000410055 NOP58Q9Y2X3 529 aaKnown RBP22.52■■□□□ 1.2
PDK1-203ENST00000410055 ADGBQ8N7X0 1667 aa22.51■■□□□ 1.19
PDK1-203ENST00000410055 ADGRL2O95490 1459 aa22.51■■□□□ 1.19
PDK1-203ENST00000410055 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
PDK1-203ENST00000410055 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
PDK1-203ENST00000410055 CDC42BPAQ5VT25 1732 aa22.5■■□□□ 1.19
PDK1-203ENST00000410055 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
PDK1-203ENST00000410055 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms