RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ZNF777Q9ULD5 760 aaPredicted RBP28.69■■■□□ 2.18
LIMS2-207ENST00000409808 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
LIMS2-207ENST00000409808 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
LIMS2-207ENST00000409808 ZCCHC11Q5TAX3 1644 aaKnown RBP28.67■■■□□ 2.18
LIMS2-207ENST00000409808 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
LIMS2-207ENST00000409808 CAMSAP2Q08AD1 1489 aa28.63■■■□□ 2.17
LIMS2-207ENST00000409808 HFM1A2PYH4 1435 aa28.63■■■□□ 2.17
LIMS2-207ENST00000409808 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
LIMS2-207ENST00000409808 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
LIMS2-207ENST00000409808 NAIPQ13075 1403 aa28.61■■■□□ 2.17
LIMS2-207ENST00000409808 KCNH8Q96L42 1107 aa28.61■■■□□ 2.17
LIMS2-207ENST00000409808 DAPK1P53355 1430 aa28.6■■■□□ 2.17
LIMS2-207ENST00000409808 ABCC5O15440 1437 aa28.59■■■□□ 2.17
LIMS2-207ENST00000409808 DNMT1P26358 1616 aaKnown RBP28.59■■■□□ 2.17
LIMS2-207ENST00000409808 TTC37Q6PGP7 1564 aa28.55■■■□□ 2.16
LIMS2-207ENST00000409808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.54■■■□□ 2.16
LIMS2-207ENST00000409808 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
LIMS2-207ENST00000409808 MAPKBP1O60336 1514 aa28.51■■■□□ 2.15
LIMS2-207ENST00000409808 GCC2Q8IWJ2 1684 aa28.49■■■□□ 2.15
LIMS2-207ENST00000409808 KDM6BO15054 1643 aa28.48■■■□□ 2.15
LIMS2-207ENST00000409808 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
LIMS2-207ENST00000409808 AKNAQ7Z591 1439 aa28.44■■■□□ 2.14
LIMS2-207ENST00000409808 HNRNPMP52272 730 aaKnown RBP eCLIP28.44■■■□□ 2.14
LIMS2-207ENST00000409808 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
LIMS2-207ENST00000409808 ROCK1Q13464 1354 aa28.42■■■□□ 2.14
LIMS2-207ENST00000409808 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 MYO5CQ9NQX4 1742 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 ARHGAP5Q13017 1502 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 WDR7Q9Y4E6 1490 aa28.37■■■□□ 2.13
LIMS2-207ENST00000409808 ADGBQ8N7X0 1667 aa28.36■■■□□ 2.13
LIMS2-207ENST00000409808 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 TRIM52Q96A61 297 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
LIMS2-207ENST00000409808 ASXL2Q76L83 1435 aa28.34■■■□□ 2.13
LIMS2-207ENST00000409808 PLCH2O75038 1416 aa28.32■■■□□ 2.12
LIMS2-207ENST00000409808 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.12
LIMS2-207ENST00000409808 SYCP2Q9BX26 1530 aa28.31■■■□□ 2.12
LIMS2-207ENST00000409808 C9orf84Q5VXU9 1444 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 TIMELESSQ9UNS1 1208 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 ARHGEF5Q12774 1597 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 TSPY4P0CV99 314 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 TSPY10P0CW01 314 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 ANKRD30AQ9BXX3 1397 aa28.27■■■□□ 2.12
LIMS2-207ENST00000409808 SHANK2Q9UPX8 1470 aa28.26■■■□□ 2.11
LIMS2-207ENST00000409808 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
LIMS2-207ENST00000409808 CYB5RLQ6IPT4 315 aa28.25■■■□□ 2.11
LIMS2-207ENST00000409808 EFCAB2Q5VUJ9 269 aa28.24■■■□□ 2.11
LIMS2-207ENST00000409808 ARHGEF12Q9NZN5 1544 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3CA6NJZ7 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3BA6NNM3 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3Q9UFD9 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 DENND4BO75064 1496 aaPredicted RBP28.22■■■□□ 2.11
LIMS2-207ENST00000409808 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
LIMS2-207ENST00000409808 MPHOSPH9Q99550 1183 aa28.19■■■□□ 2.1
LIMS2-207ENST00000409808 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
LIMS2-207ENST00000409808 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
LIMS2-207ENST00000409808 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
LIMS2-207ENST00000409808 ANKRD50Q9ULJ7 1429 aa28.16■■■□□ 2.1
LIMS2-207ENST00000409808 FOXD1Q16676 465 aa28.16■■■□□ 2.1
LIMS2-207ENST00000409808 KIF15Q9NS87 1388 aa28.15■■■□□ 2.1
LIMS2-207ENST00000409808 ABCC1P33527 1531 aa28.14■■■□□ 2.1
LIMS2-207ENST00000409808 TRAPPC8Q9Y2L5 1435 aa28.11■■■□□ 2.09
LIMS2-207ENST00000409808 ARAP3Q8WWN8 1544 aa28.11■■■□□ 2.09
LIMS2-207ENST00000409808 FANCAO15360 1455 aa28.1■■■□□ 2.09
LIMS2-207ENST00000409808 SLC4A1APQ9BWU0 796 aaKnown RBP28.09■■■□□ 2.09
LIMS2-207ENST00000409808 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
LIMS2-207ENST00000409808 MYT1Q01538 1121 aa28.07■■■□□ 2.08
LIMS2-207ENST00000409808 PZPP20742 1482 aa28.07■■■□□ 2.08
LIMS2-207ENST00000409808 AFAP1Q8N556 730 aa28.06■■■□□ 2.08
LIMS2-207ENST00000409808 CD109Q6YHK3 1445 aa28■■■□□ 2.07
LIMS2-207ENST00000409808 NUP155O75694 1391 aa27.99■■■□□ 2.07
LIMS2-207ENST00000409808 ADGRL1O94910 1474 aa27.99■■■□□ 2.07
LIMS2-207ENST00000409808 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 PLXNC1O60486 1568 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 SCAPERQ9BY12 1400 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
LIMS2-207ENST00000409808 SPAG9O60271 1321 aaKnown RBP27.96■■■□□ 2.07
LIMS2-207ENST00000409808 ANKRD30BQ9BXX2 1392 aa27.95■■■□□ 2.07
LIMS2-207ENST00000409808 SUPT16HQ9Y5B9 1047 aaKnown RBP27.94■■■□□ 2.06
LIMS2-207ENST00000409808 PKD2Q13563 968 aa27.93■■■□□ 2.06
LIMS2-207ENST00000409808 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
LIMS2-207ENST00000409808 DUOX2Q9NRD8 1548 aa27.9■■■□□ 2.06
LIMS2-207ENST00000409808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.89■■■□□ 2.05
LIMS2-207ENST00000409808 KDM5DQ9BY66 1539 aa27.88■■■□□ 2.05
LIMS2-207ENST00000409808 MYT1LQ9UL68 1186 aa27.87■■■□□ 2.05
LIMS2-207ENST00000409808 RTEL1-TNFRSF6BF6WH68 1400 aa27.86■■■□□ 2.05
LIMS2-207ENST00000409808 DDX10Q13206 875 aaKnown RBP27.85■■■□□ 2.05
LIMS2-207ENST00000409808 ATP7AQ04656 1500 aa27.84■■■□□ 2.05
LIMS2-207ENST00000409808 INO80Q9ULG1 1556 aaPredicted RBP27.83■■■□□ 2.05
LIMS2-207ENST00000409808 UNC13BO14795 1591 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 FAM135AQ9P2D6 1515 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 CFAP74Q9C0B2 1584 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
LIMS2-207ENST00000409808 RPRD2Q5VT52 1461 aaKnown RBP27.81■■■□□ 2.04
LIMS2-207ENST00000409808 MAP3K4Q9Y6R4 1608 aa27.8■■■□□ 2.04
LIMS2-207ENST00000409808 FAM69CQ0P6D2 419 aa27.79■■■□□ 2.04
LIMS2-207ENST00000409808 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms