RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ZNF777Q9ULD5 760 aaPredicted RBP28.69■■■□□ 2.18
LIMS2-207ENST00000409808 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
LIMS2-207ENST00000409808 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
LIMS2-207ENST00000409808 ZCCHC11Q5TAX3 1644 aaKnown RBP28.67■■■□□ 2.18
LIMS2-207ENST00000409808 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
LIMS2-207ENST00000409808 CAMSAP2Q08AD1 1489 aa28.63■■■□□ 2.17
LIMS2-207ENST00000409808 HFM1A2PYH4 1435 aa28.63■■■□□ 2.17
LIMS2-207ENST00000409808 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
LIMS2-207ENST00000409808 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
LIMS2-207ENST00000409808 NAIPQ13075 1403 aa28.61■■■□□ 2.17
LIMS2-207ENST00000409808 KCNH8Q96L42 1107 aa28.61■■■□□ 2.17
LIMS2-207ENST00000409808 DAPK1P53355 1430 aa28.6■■■□□ 2.17
LIMS2-207ENST00000409808 ABCC5O15440 1437 aa28.59■■■□□ 2.17
LIMS2-207ENST00000409808 DNMT1P26358 1616 aaKnown RBP28.59■■■□□ 2.17
LIMS2-207ENST00000409808 TTC37Q6PGP7 1564 aa28.55■■■□□ 2.16
LIMS2-207ENST00000409808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.54■■■□□ 2.16
LIMS2-207ENST00000409808 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
LIMS2-207ENST00000409808 MAPKBP1O60336 1514 aa28.51■■■□□ 2.15
LIMS2-207ENST00000409808 GCC2Q8IWJ2 1684 aa28.49■■■□□ 2.15
LIMS2-207ENST00000409808 KDM6BO15054 1643 aa28.48■■■□□ 2.15
LIMS2-207ENST00000409808 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
LIMS2-207ENST00000409808 AKNAQ7Z591 1439 aa28.44■■■□□ 2.14
LIMS2-207ENST00000409808 HNRNPMP52272 730 aaKnown RBP eCLIP28.44■■■□□ 2.14
LIMS2-207ENST00000409808 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
LIMS2-207ENST00000409808 ROCK1Q13464 1354 aa28.42■■■□□ 2.14
LIMS2-207ENST00000409808 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 MYO5CQ9NQX4 1742 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 ARHGAP5Q13017 1502 aa28.41■■■□□ 2.14
LIMS2-207ENST00000409808 WDR7Q9Y4E6 1490 aa28.37■■■□□ 2.13
LIMS2-207ENST00000409808 ADGBQ8N7X0 1667 aa28.36■■■□□ 2.13
LIMS2-207ENST00000409808 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 TRIM52Q96A61 297 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
LIMS2-207ENST00000409808 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
LIMS2-207ENST00000409808 ASXL2Q76L83 1435 aa28.34■■■□□ 2.13
LIMS2-207ENST00000409808 PLCH2O75038 1416 aa28.32■■■□□ 2.12
LIMS2-207ENST00000409808 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.12
LIMS2-207ENST00000409808 SYCP2Q9BX26 1530 aa28.31■■■□□ 2.12
LIMS2-207ENST00000409808 C9orf84Q5VXU9 1444 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 TIMELESSQ9UNS1 1208 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 ARHGEF5Q12774 1597 aa28.3■■■□□ 2.12
LIMS2-207ENST00000409808 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 TSPY4P0CV99 314 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 TSPY10P0CW01 314 aa28.29■■■□□ 2.12
LIMS2-207ENST00000409808 ANKRD30AQ9BXX3 1397 aa28.27■■■□□ 2.12
LIMS2-207ENST00000409808 SHANK2Q9UPX8 1470 aa28.26■■■□□ 2.11
LIMS2-207ENST00000409808 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
LIMS2-207ENST00000409808 CYB5RLQ6IPT4 315 aa28.25■■■□□ 2.11
LIMS2-207ENST00000409808 EFCAB2Q5VUJ9 269 aa28.24■■■□□ 2.11
LIMS2-207ENST00000409808 ARHGEF12Q9NZN5 1544 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3CA6NJZ7 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3BA6NNM3 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 RIMBP3Q9UFD9 1639 aa28.23■■■□□ 2.11
LIMS2-207ENST00000409808 DENND4BO75064 1496 aaPredicted RBP28.22■■■□□ 2.11
LIMS2-207ENST00000409808 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
LIMS2-207ENST00000409808 MPHOSPH9Q99550 1183 aa28.19■■■□□ 2.1
LIMS2-207ENST00000409808 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
LIMS2-207ENST00000409808 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
LIMS2-207ENST00000409808 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
LIMS2-207ENST00000409808 ANKRD50Q9ULJ7 1429 aa28.16■■■□□ 2.1
LIMS2-207ENST00000409808 FOXD1Q16676 465 aa28.16■■■□□ 2.1
LIMS2-207ENST00000409808 KIF15Q9NS87 1388 aa28.15■■■□□ 2.1
LIMS2-207ENST00000409808 ABCC1P33527 1531 aa28.14■■■□□ 2.1
LIMS2-207ENST00000409808 TRAPPC8Q9Y2L5 1435 aa28.11■■■□□ 2.09
LIMS2-207ENST00000409808 ARAP3Q8WWN8 1544 aa28.11■■■□□ 2.09
LIMS2-207ENST00000409808 FANCAO15360 1455 aa28.1■■■□□ 2.09
LIMS2-207ENST00000409808 SLC4A1APQ9BWU0 796 aaKnown RBP28.09■■■□□ 2.09
LIMS2-207ENST00000409808 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
LIMS2-207ENST00000409808 MYT1Q01538 1121 aa28.07■■■□□ 2.08
LIMS2-207ENST00000409808 PZPP20742 1482 aa28.07■■■□□ 2.08
LIMS2-207ENST00000409808 AFAP1Q8N556 730 aa28.06■■■□□ 2.08
LIMS2-207ENST00000409808 CD109Q6YHK3 1445 aa28■■■□□ 2.07
LIMS2-207ENST00000409808 NUP155O75694 1391 aa27.99■■■□□ 2.07
LIMS2-207ENST00000409808 ADGRL1O94910 1474 aa27.99■■■□□ 2.07
LIMS2-207ENST00000409808 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 PLXNC1O60486 1568 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 SCAPERQ9BY12 1400 aa27.98■■■□□ 2.07
LIMS2-207ENST00000409808 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
LIMS2-207ENST00000409808 SPAG9O60271 1321 aaKnown RBP27.96■■■□□ 2.07
LIMS2-207ENST00000409808 ANKRD30BQ9BXX2 1392 aa27.95■■■□□ 2.07
LIMS2-207ENST00000409808 SUPT16HQ9Y5B9 1047 aaKnown RBP27.94■■■□□ 2.06
LIMS2-207ENST00000409808 PKD2Q13563 968 aa27.93■■■□□ 2.06
LIMS2-207ENST00000409808 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
LIMS2-207ENST00000409808 DUOX2Q9NRD8 1548 aa27.9■■■□□ 2.06
LIMS2-207ENST00000409808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.89■■■□□ 2.05
LIMS2-207ENST00000409808 KDM5DQ9BY66 1539 aa27.88■■■□□ 2.05
LIMS2-207ENST00000409808 MYT1LQ9UL68 1186 aa27.87■■■□□ 2.05
LIMS2-207ENST00000409808 RTEL1-TNFRSF6BF6WH68 1400 aa27.86■■■□□ 2.05
LIMS2-207ENST00000409808 DDX10Q13206 875 aaKnown RBP27.85■■■□□ 2.05
LIMS2-207ENST00000409808 ATP7AQ04656 1500 aa27.84■■■□□ 2.05
LIMS2-207ENST00000409808 INO80Q9ULG1 1556 aaPredicted RBP27.83■■■□□ 2.05
LIMS2-207ENST00000409808 UNC13BO14795 1591 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 FAM135AQ9P2D6 1515 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 CFAP74Q9C0B2 1584 aa27.82■■■□□ 2.04
LIMS2-207ENST00000409808 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
LIMS2-207ENST00000409808 RPRD2Q5VT52 1461 aaKnown RBP27.81■■■□□ 2.04
LIMS2-207ENST00000409808 MAP3K4Q9Y6R4 1608 aa27.8■■■□□ 2.04
LIMS2-207ENST00000409808 FAM69CQ0P6D2 419 aa27.79■■■□□ 2.04
LIMS2-207ENST00000409808 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms