RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 TMF1P82094 1093 aa15.23■□□□□ 0.03
SHANK2-203ENST00000409161 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
SHANK2-203ENST00000409161 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
SHANK2-203ENST00000409161 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-203ENST00000409161 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
SHANK2-203ENST00000409161 KANK1Q14678 1352 aa15.22■□□□□ 0.03
SHANK2-203ENST00000409161 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
SHANK2-203ENST00000409161 TPM3P06753 285 aa15.22■□□□□ 0.03
SHANK2-203ENST00000409161 CCDC70Q6NSX1 233 aa15.22■□□□□ 0.03
SHANK2-203ENST00000409161 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
SHANK2-203ENST00000409161 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
SHANK2-203ENST00000409161 PMFBP1Q8TBY8 1022 aa15.21■□□□□ 0.03
SHANK2-203ENST00000409161 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
SHANK2-203ENST00000409161 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
SHANK2-203ENST00000409161 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
SHANK2-203ENST00000409161 POGKQ9P215 609 aa15.19■□□□□ 0.02
SHANK2-203ENST00000409161 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
SHANK2-203ENST00000409161 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
SHANK2-203ENST00000409161 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
SHANK2-203ENST00000409161 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
SHANK2-203ENST00000409161 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
SHANK2-203ENST00000409161 CEP89Q96ST8 783 aa15.16■□□□□ 0.02
SHANK2-203ENST00000409161 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-203ENST00000409161 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
SHANK2-203ENST00000409161 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
SHANK2-203ENST00000409161 TEX35Q5T0J7 233 aa15.16■□□□□ 0.02
SHANK2-203ENST00000409161 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
SHANK2-203ENST00000409161 ATP6V1DQ9Y5K8 247 aa15.15■□□□□ 0.02
SHANK2-203ENST00000409161 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
SHANK2-203ENST00000409161 ST18O60284 1047 aa15.15■□□□□ 0.02
SHANK2-203ENST00000409161 TSR1Q2NL82 804 aaKnown RBP15.15■□□□□ 0.02
SHANK2-203ENST00000409161 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
SHANK2-203ENST00000409161 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-203ENST00000409161 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
SHANK2-203ENST00000409161 RALBP1Q15311 655 aa15.13■□□□□ 0.01
SHANK2-203ENST00000409161 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
SHANK2-203ENST00000409161 HMMRO75330 724 aa15.13■□□□□ 0.01
SHANK2-203ENST00000409161 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
SHANK2-203ENST00000409161 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
SHANK2-203ENST00000409161 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
SHANK2-203ENST00000409161 TPM1P09493 284 aa15.12■□□□□ 0.01
SHANK2-203ENST00000409161 NOM1Q5C9Z4 860 aaKnown RBP15.12■□□□□ 0.01
SHANK2-203ENST00000409161 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
SHANK2-203ENST00000409161 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
SHANK2-203ENST00000409161 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
SHANK2-203ENST00000409161 MTERF4Q7Z6M4 381 aaKnown RBP15.09■□□□□ 0.01
SHANK2-203ENST00000409161 SLKQ9H2G2 1235 aaPredicted RBP15.09■□□□□ 0.01
SHANK2-203ENST00000409161 ARID3AQ99856 593 aa15.08■□□□□ 0
SHANK2-203ENST00000409161 TPM2P07951 284 aa15.08■□□□□ 0
SHANK2-203ENST00000409161 MORC1Q86VD1 984 aa15.08■□□□□ 0
SHANK2-203ENST00000409161 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
SHANK2-203ENST00000409161 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
SHANK2-203ENST00000409161 GOLGA6L19H0YKK7 550 aa15.07■□□□□ 0
SHANK2-203ENST00000409161 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
SHANK2-203ENST00000409161 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
SHANK2-203ENST00000409161 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ 0
SHANK2-203ENST00000409161 ITPRIPQ8IWB1 547 aa15.05■□□□□ 0
SHANK2-203ENST00000409161 PRM3Q9NNZ6 103 aa15.05■□□□□ -0
SHANK2-203ENST00000409161 SETD5Q9C0A6 1442 aa15.04■□□□□ -0
SHANK2-203ENST00000409161 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
SHANK2-203ENST00000409161 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
SHANK2-203ENST00000409161 PDE3BQ13370 1112 aa15.04■□□□□ -0
SHANK2-203ENST00000409161 RASSF8Q8NHQ8 419 aa15.04■□□□□ -0
SHANK2-203ENST00000409161 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
SHANK2-203ENST00000409161 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
SHANK2-203ENST00000409161 CDR1P51861 262 aa15.02□□□□□ -0.01
SHANK2-203ENST00000409161 ACBD3Q9H3P7 528 aa15.02□□□□□ -0.01
SHANK2-203ENST00000409161 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
SHANK2-203ENST00000409161 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
SHANK2-203ENST00000409161 IPO7O95373 1038 aaKnown RBP15.01□□□□□ -0.01
SHANK2-203ENST00000409161 MAP7D2Q96T17 732 aa15.01□□□□□ -0.01
SHANK2-203ENST00000409161 TMX4Q9H1E5 349 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-203ENST00000409161 TPD52L1Q16890 204 aaPredicted RBP15□□□□□ -0.01
SHANK2-203ENST00000409161 HOOK1Q9UJC3 728 aaKnown RBP15□□□□□ -0.01
SHANK2-203ENST00000409161 NACADO15069 1562 aa15□□□□□ -0.01
SHANK2-203ENST00000409161 HDGFL2Q7Z4V5 671 aaPredicted RBP15□□□□□ -0.01
SHANK2-203ENST00000409161 GSE1Q14687 1217 aa15□□□□□ -0.01
SHANK2-203ENST00000409161 STK31Q9BXU1 1019 aa15□□□□□ -0.01
SHANK2-203ENST00000409161 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
SHANK2-203ENST00000409161 LMOD3Q0VAK6 560 aa14.99□□□□□ -0.01
SHANK2-203ENST00000409161 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
SHANK2-203ENST00000409161 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
SHANK2-203ENST00000409161 ANKRD20A12PQ8NF67 263 aa14.99□□□□□ -0.01
SHANK2-203ENST00000409161 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
SHANK2-203ENST00000409161 AK7Q96M32 723 aa14.98□□□□□ -0.01
SHANK2-203ENST00000409161 SF3A1Q15459 793 aaKnown RBP14.98□□□□□ -0.01
SHANK2-203ENST00000409161 ARGLU1Q9NWB6 273 aaPredicted RBP14.98□□□□□ -0.01
SHANK2-203ENST00000409161 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
SHANK2-203ENST00000409161 GORABQ5T7V8 394 aa14.98□□□□□ -0.01
SHANK2-203ENST00000409161 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
SHANK2-203ENST00000409161 BECN2A8MW95 431 aa14.97□□□□□ -0.01
SHANK2-203ENST00000409161 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
SHANK2-203ENST00000409161 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
SHANK2-203ENST00000409161 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
SHANK2-203ENST00000409161 H3BQV1 296 aa14.96□□□□□ -0.01
SHANK2-203ENST00000409161 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
SHANK2-203ENST00000409161 KCNH8Q96L42 1107 aa14.96□□□□□ -0.02
SHANK2-203ENST00000409161 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.02
SHANK2-203ENST00000409161 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
SHANK2-203ENST00000409161 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms