RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 LTBP4Q8N2S1 1624 aa6.73□□□□□ -1.33
RNU6ATAC-201ENST00000408749 ARID3CA6NKF2 412 aa6.73□□□□□ -1.33
RNU6ATAC-201ENST00000408749 MED1Q15648 1581 aaPredicted RBP6.73□□□□□ -1.33
RNU6ATAC-201ENST00000408749 SIGLEC1Q9BZZ2 1709 aa6.73□□□□□ -1.33
RNU6ATAC-201ENST00000408749 HECW1Q76N89 1606 aa6.72□□□□□ -1.33
RNU6ATAC-201ENST00000408749 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.33
RNU6ATAC-201ENST00000408749 UBAP1LF5GYI3 381 aa6.71□□□□□ -1.34
RNU6ATAC-201ENST00000408749 PHF23Q9BUL5 403 aaPredicted RBP6.71□□□□□ -1.34
RNU6ATAC-201ENST00000408749 ESF1Q9H501 851 aaKnown RBP6.71□□□□□ -1.34
RNU6ATAC-201ENST00000408749 ATP10AO60312 1499 aa6.71□□□□□ -1.34
RNU6ATAC-201ENST00000408749 C3P01024 1663 aa6.7□□□□□ -1.34
RNU6ATAC-201ENST00000408749 NCOA1Q15788 1441 aa6.68□□□□□ -1.34
RNU6ATAC-201ENST00000408749 SUPT6HQ7KZ85 1726 aaKnown RBP6.68□□□□□ -1.34
RNU6ATAC-201ENST00000408749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.68□□□□□ -1.34
RNU6ATAC-201ENST00000408749 PLEKHD1A6NEE1 506 aa6.68□□□□□ -1.34
RNU6ATAC-201ENST00000408749 SAMD9Q5K651 1589 aa6.68□□□□□ -1.34
RNU6ATAC-201ENST00000408749 MYO5CQ9NQX4 1742 aa6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 REREQ9P2R6 1566 aa6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 CEBPAP49715 358 aaPredicted RBP6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 SCAF1Q9H7N4 1312 aaKnown RBP6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 SCAPERQ9BY12 1400 aa6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 TRAPPC8Q9Y2L5 1435 aa6.67□□□□□ -1.34
RNU6ATAC-201ENST00000408749 NUP153P49790 1475 aaKnown RBP6.66□□□□□ -1.34
RNU6ATAC-201ENST00000408749 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
RNU6ATAC-201ENST00000408749 CAMSAP1Q5T5Y3 1602 aa6.66□□□□□ -1.34
RNU6ATAC-201ENST00000408749 CNTLNQ9NXG0 1405 aa6.66□□□□□ -1.34
RNU6ATAC-201ENST00000408749 P3H3Q8IVL6 736 aa6.65□□□□□ -1.34
RNU6ATAC-201ENST00000408749 MYT1LQ9UL68 1186 aa6.65□□□□□ -1.34
RNU6ATAC-201ENST00000408749 AGLP35573 1532 aa6.65□□□□□ -1.35
RNU6ATAC-201ENST00000408749 MROH2AA6NES4 1674 aa6.65□□□□□ -1.35
RNU6ATAC-201ENST00000408749 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.35
RNU6ATAC-201ENST00000408749 TOM1O60784 492 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PLCH2O75038 1416 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 CPS1P31327 1500 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 KDM5CP41229 1560 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PLA2R1Q13018 1463 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 NPATQ14207 1427 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 DIP2CQ9Y2E4 1556 aa6.63□□□□□ -1.35
RNU6ATAC-201ENST00000408749 MYO3AQ8NEV4 1616 aa6.62□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PRXQ9BXM0 1461 aa6.62□□□□□ -1.35
RNU6ATAC-201ENST00000408749 ZNF335Q9H4Z2 1342 aaPredicted RBP6.62□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PKD2Q13563 968 aa6.62□□□□□ -1.35
RNU6ATAC-201ENST00000408749 KIF14Q15058 1648 aa6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 ABCA6Q8N139 1617 aa6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 ARHGAP5Q13017 1502 aa6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 HSPA1LP34931 641 aa6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 EFCAB2Q5VUJ9 269 aa6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PTPRKQ15262 1439 aa6.6□□□□□ -1.35
RNU6ATAC-201ENST00000408749 POLR1AO95602 1720 aaPredicted RBP6.6□□□□□ -1.35
RNU6ATAC-201ENST00000408749 PPP6R1Q9UPN7 881 aa6.6□□□□□ -1.35
RNU6ATAC-201ENST00000408749 TCOF1Q13428 1488 aaKnown RBP6.59□□□□□ -1.36
RNU6ATAC-201ENST00000408749 MLH3Q9UHC1 1453 aa6.59□□□□□ -1.36
RNU6ATAC-201ENST00000408749 NCKAP5LQ9HCH0 1330 aa6.58□□□□□ -1.36
RNU6ATAC-201ENST00000408749 CLIP1P30622 1438 aa6.58□□□□□ -1.36
RNU6ATAC-201ENST00000408749 CDK13Q14004 1512 aaKnown RBP6.57□□□□□ -1.36
RNU6ATAC-201ENST00000408749 CDK11AQ9UQ88 783 aaPredicted RBP6.57□□□□□ -1.36
RNU6ATAC-201ENST00000408749 CLTCQ00610 1675 aaKnown RBP6.57□□□□□ -1.36
RNU6ATAC-201ENST00000408749 ITSN2Q9NZM3 1697 aa6.57□□□□□ -1.36
RNU6ATAC-201ENST00000408749 RNF17Q9BXT8 1623 aaKnown RBP6.56□□□□□ -1.36
RNU6ATAC-201ENST00000408749 ABCC1P33527 1531 aa6.55□□□□□ -1.36
RNU6ATAC-201ENST00000408749 SHANK2Q9UPX8 1470 aa6.55□□□□□ -1.36
RNU6ATAC-201ENST00000408749 SYNMO15061 1565 aa6.55□□□□□ -1.36
RNU6ATAC-201ENST00000408749 PREX2Q70Z35 1606 aa6.54□□□□□ -1.36
RNU6ATAC-201ENST00000408749 AFAP1Q8N556 730 aa6.54□□□□□ -1.36
RNU6ATAC-201ENST00000408749 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
RNU6ATAC-201ENST00000408749 KIDINS220Q9ULH0 1771 aa6.54□□□□□ -1.36
RNU6ATAC-201ENST00000408749 A2ML1A8K2U0 1454 aa6.53□□□□□ -1.36
RNU6ATAC-201ENST00000408749 CDC42BPBQ9Y5S2 1711 aa6.53□□□□□ -1.36
RNU6ATAC-201ENST00000408749 RANGAP1P46060 587 aaPredicted RBP6.53□□□□□ -1.36
RNU6ATAC-201ENST00000408749 DNMT1P26358 1616 aaKnown RBP6.53□□□□□ -1.36
RNU6ATAC-201ENST00000408749 TROQ12816 1431 aaPredicted RBP6.52□□□□□ -1.37
RNU6ATAC-201ENST00000408749 FMN1Q68DA7 1419 aa6.51□□□□□ -1.37
RNU6ATAC-201ENST00000408749 ATP1B4Q9UN42 357 aaPredicted RBP6.51□□□□□ -1.37
RNU6ATAC-201ENST00000408749 NEURL4Q96JN8 1562 aa6.51□□□□□ -1.37
RNU6ATAC-201ENST00000408749 DEPDC5O75140 1603 aa6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 IQGAP1P46940 1657 aa6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 SAMD9LQ8IVG5 1584 aa6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 VWDEQ8N2E2 1590 aa6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 SENP3Q9H4L4 574 aaPredicted RBP6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 SETD1AO15047 1707 aaKnown RBP6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 ATP7AQ04656 1500 aa6.5□□□□□ -1.37
RNU6ATAC-201ENST00000408749 ADGBQ8N7X0 1667 aa6.49□□□□□ -1.37
RNU6ATAC-201ENST00000408749 PLXNC1O60486 1568 aa6.49□□□□□ -1.37
RNU6ATAC-201ENST00000408749 FAM135AQ9P2D6 1515 aa6.49□□□□□ -1.37
RNU6ATAC-201ENST00000408749 EEA1Q15075 1411 aa6.49□□□□□ -1.37
RNU6ATAC-201ENST00000408749 A2MP01023 1474 aa6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 ALKQ9UM73 1620 aa6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 CSRNP3Q8WYN3 585 aa6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 NPHP4O75161 1426 aaPredicted RBP6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 INO80Q9ULG1 1556 aaPredicted RBP6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 SPAG9O60271 1321 aaKnown RBP6.48□□□□□ -1.37
RNU6ATAC-201ENST00000408749 CDC42BPAQ5VT25 1732 aa6.47□□□□□ -1.37
RNU6ATAC-201ENST00000408749 SYCP2Q9BX26 1530 aa6.47□□□□□ -1.37
RNU6ATAC-201ENST00000408749 MED14O60244 1454 aa6.47□□□□□ -1.37
RNU6ATAC-201ENST00000408749 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
RNU6ATAC-201ENST00000408749 PLEKHH2Q8IVE3 1493 aa6.47□□□□□ -1.37
RNU6ATAC-201ENST00000408749 NLRP1Q9C000 1473 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms