RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CROCC2H7BZ55 1655 aa23.96■■□□□ 1.43
PIKFYVE-204ENST00000407449 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
PIKFYVE-204ENST00000407449 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
PIKFYVE-204ENST00000407449 CDC42BPAQ5VT25 1732 aa23.94■■□□□ 1.42
PIKFYVE-204ENST00000407449 ABCC10Q5T3U5 1492 aa23.93■■□□□ 1.42
PIKFYVE-204ENST00000407449 ZNF644Q9H582 1327 aaPredicted RBP23.92■■□□□ 1.42
PIKFYVE-204ENST00000407449 MIER1Q8N108 512 aa23.92■■□□□ 1.42
PIKFYVE-204ENST00000407449 PLEKHD1A6NEE1 506 aa23.92■■□□□ 1.42
PIKFYVE-204ENST00000407449 CFDP1Q9UEE9 299 aaPredicted RBP23.92■■□□□ 1.42
PIKFYVE-204ENST00000407449 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
PIKFYVE-204ENST00000407449 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.41
PIKFYVE-204ENST00000407449 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
PIKFYVE-204ENST00000407449 ADGRL2O95490 1459 aa23.86■■□□□ 1.41
PIKFYVE-204ENST00000407449 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
PIKFYVE-204ENST00000407449 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
PIKFYVE-204ENST00000407449 TRIM52Q96A61 297 aa23.84■■□□□ 1.41
PIKFYVE-204ENST00000407449 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
PIKFYVE-204ENST00000407449 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
PIKFYVE-204ENST00000407449 ABCC2Q92887 1545 aa23.8■■□□□ 1.4
PIKFYVE-204ENST00000407449 NCOA1Q15788 1441 aa23.8■■□□□ 1.4
PIKFYVE-204ENST00000407449 KDM5BQ9UGL1 1544 aa23.79■■□□□ 1.4
PIKFYVE-204ENST00000407449 MPHOSPH9Q99550 1183 aa23.79■■□□□ 1.4
PIKFYVE-204ENST00000407449 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
PIKFYVE-204ENST00000407449 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
PIKFYVE-204ENST00000407449 ARHGEF5Q12774 1597 aa23.75■■□□□ 1.39
PIKFYVE-204ENST00000407449 ANKRD30AQ9BXX3 1397 aa23.74■■□□□ 1.39
PIKFYVE-204ENST00000407449 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
PIKFYVE-204ENST00000407449 C9orf84Q5VXU9 1444 aa23.7■■□□□ 1.38
PIKFYVE-204ENST00000407449 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
PIKFYVE-204ENST00000407449 SAMD9LQ8IVG5 1584 aa23.69■■□□□ 1.38
PIKFYVE-204ENST00000407449 PZPP20742 1482 aa23.69■■□□□ 1.38
PIKFYVE-204ENST00000407449 UHRF1BP1LA0JNW5 1464 aa23.68■■□□□ 1.38
PIKFYVE-204ENST00000407449 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
PIKFYVE-204ENST00000407449 TTC37Q6PGP7 1564 aa23.68■■□□□ 1.38
PIKFYVE-204ENST00000407449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.66■■□□□ 1.38
PIKFYVE-204ENST00000407449 RPRD2Q5VT52 1461 aaKnown RBP23.65■■□□□ 1.38
PIKFYVE-204ENST00000407449 MYO5CQ9NQX4 1742 aa23.65■■□□□ 1.38
PIKFYVE-204ENST00000407449 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
PIKFYVE-204ENST00000407449 ZCCHC11Q5TAX3 1644 aaKnown RBP23.65■■□□□ 1.38
PIKFYVE-204ENST00000407449 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.37
PIKFYVE-204ENST00000407449 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
PIKFYVE-204ENST00000407449 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
PIKFYVE-204ENST00000407449 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
PIKFYVE-204ENST00000407449 FOXD1Q16676 465 aa23.6■■□□□ 1.37
PIKFYVE-204ENST00000407449 ARHGAP5Q13017 1502 aa23.59■■□□□ 1.37
PIKFYVE-204ENST00000407449 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
PIKFYVE-204ENST00000407449 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
PIKFYVE-204ENST00000407449 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
PIKFYVE-204ENST00000407449 MAST1Q9Y2H9 1570 aa23.58■■□□□ 1.37
PIKFYVE-204ENST00000407449 TEX14Q8IWB6 1497 aa23.58■■□□□ 1.36
PIKFYVE-204ENST00000407449 KIAA1107Q9UPP5 1409 aa23.58■■□□□ 1.36
PIKFYVE-204ENST00000407449 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
PIKFYVE-204ENST00000407449 SYCP2Q9BX26 1530 aa23.56■■□□□ 1.36
PIKFYVE-204ENST00000407449 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.363e-7■■■■□ 24.6
PIKFYVE-204ENST00000407449 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
PIKFYVE-204ENST00000407449 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
PIKFYVE-204ENST00000407449 L3MBTL2Q969R5 705 aa23.53■■□□□ 1.36
PIKFYVE-204ENST00000407449 DDX10Q13206 875 aaKnown RBP23.51■■□□□ 1.35
PIKFYVE-204ENST00000407449 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
PIKFYVE-204ENST00000407449 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
PIKFYVE-204ENST00000407449 PLCH2O75038 1416 aa23.47■■□□□ 1.35
PIKFYVE-204ENST00000407449 NUP155O75694 1391 aa23.46■■□□□ 1.35
PIKFYVE-204ENST00000407449 PKD2Q13563 968 aa23.45■■□□□ 1.35
PIKFYVE-204ENST00000407449 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
PIKFYVE-204ENST00000407449 UNC13BO14795 1591 aa23.43■■□□□ 1.34
PIKFYVE-204ENST00000407449 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
PIKFYVE-204ENST00000407449 GTF3C3Q9Y5Q9 886 aa23.42■■□□□ 1.34
PIKFYVE-204ENST00000407449 ABCC1P33527 1531 aa23.42■■□□□ 1.34
PIKFYVE-204ENST00000407449 HSPA5P11021 654 aaKnown RBP23.41■■□□□ 1.34
PIKFYVE-204ENST00000407449 EIF4G2P78344 907 aaKnown RBP eCLIP23.4■■□□□ 1.34
PIKFYVE-204ENST00000407449 ARHGEF12Q9NZN5 1544 aa23.39■■□□□ 1.34
PIKFYVE-204ENST00000407449 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
PIKFYVE-204ENST00000407449 WDR7Q9Y4E6 1490 aa23.37■■□□□ 1.33
PIKFYVE-204ENST00000407449 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
PIKFYVE-204ENST00000407449 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
PIKFYVE-204ENST00000407449 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
PIKFYVE-204ENST00000407449 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
PIKFYVE-204ENST00000407449 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
PIKFYVE-204ENST00000407449 ANP32CO43423 234 aa23.32■■□□□ 1.32
PIKFYVE-204ENST00000407449 ABCA9Q8IUA7 1624 aa23.32■■□□□ 1.32
PIKFYVE-204ENST00000407449 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
PIKFYVE-204ENST00000407449 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
PIKFYVE-204ENST00000407449 MAGI2Q86UL8 1455 aa23.3■■□□□ 1.32
PIKFYVE-204ENST00000407449 WASHC2AQ641Q2 1341 aa23.29■■□□□ 1.32
PIKFYVE-204ENST00000407449 UHRF1BP1Q6BDS2 1440 aa23.28■■□□□ 1.32
PIKFYVE-204ENST00000407449 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
PIKFYVE-204ENST00000407449 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
PIKFYVE-204ENST00000407449 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
PIKFYVE-204ENST00000407449 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
PIKFYVE-204ENST00000407449 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
PIKFYVE-204ENST00000407449 CCDC7Q96M83 1385 aa23.23■■□□□ 1.31
PIKFYVE-204ENST00000407449 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
PIKFYVE-204ENST00000407449 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
PIKFYVE-204ENST00000407449 ASXL2Q76L83 1435 aa23.21■■□□□ 1.31
PIKFYVE-204ENST00000407449 FANCAO15360 1455 aa23.21■■□□□ 1.31
PIKFYVE-204ENST00000407449 KDM5CP41229 1560 aa23.2■■□□□ 1.3
PIKFYVE-204ENST00000407449 INO80Q9ULG1 1556 aaPredicted RBP23.19■■□□□ 1.3
PIKFYVE-204ENST00000407449 CCDC144AA2RUR9 1427 aa23.17■■□□□ 1.3
PIKFYVE-204ENST00000407449 SPAG9O60271 1321 aaKnown RBP23.17■■□□□ 1.3
PIKFYVE-204ENST00000407449 USP47Q96K76 1375 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms