RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 FBLN2P98095 1184 aa22.93■■□□□ 1.26
CDK11B-204ENST00000407249 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
CDK11B-204ENST00000407249 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
CDK11B-204ENST00000407249 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
CDK11B-204ENST00000407249 AKNAQ7Z591 1439 aa22.9■■□□□ 1.26
CDK11B-204ENST00000407249 CCER2I3L3R5 266 aa22.89■■□□□ 1.26
CDK11B-204ENST00000407249 PTPRKQ15262 1439 aa22.87■■□□□ 1.25
CDK11B-204ENST00000407249 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
CDK11B-204ENST00000407249 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
CDK11B-204ENST00000407249 ABCA8O94911 1581 aa22.85■■□□□ 1.25
CDK11B-204ENST00000407249 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
CDK11B-204ENST00000407249 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
CDK11B-204ENST00000407249 NAIPQ13075 1403 aa22.83■■□□□ 1.25
CDK11B-204ENST00000407249 CHD1O14646 1710 aa22.83■■□□□ 1.25
CDK11B-204ENST00000407249 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
CDK11B-204ENST00000407249 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.24
CDK11B-204ENST00000407249 ANP32CO43423 234 aa22.82■■□□□ 1.24
CDK11B-204ENST00000407249 ITSN2Q9NZM3 1697 aa22.82■■□□□ 1.24
CDK11B-204ENST00000407249 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
CDK11B-204ENST00000407249 NEFLP07196 543 aa22.81■■□□□ 1.24
CDK11B-204ENST00000407249 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
CDK11B-204ENST00000407249 SHROOM2Q13796 1616 aa22.78■■□□□ 1.24
CDK11B-204ENST00000407249 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
CDK11B-204ENST00000407249 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
CDK11B-204ENST00000407249 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
CDK11B-204ENST00000407249 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
CDK11B-204ENST00000407249 ROCK1Q13464 1354 aa22.73■■□□□ 1.23
CDK11B-204ENST00000407249 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
CDK11B-204ENST00000407249 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
CDK11B-204ENST00000407249 DAPK1P53355 1430 aa22.7■■□□□ 1.23
CDK11B-204ENST00000407249 KIF14Q15058 1648 aa22.7■■□□□ 1.22
CDK11B-204ENST00000407249 PTPRGP23470 1445 aa22.69■■□□□ 1.22
CDK11B-204ENST00000407249 ATP10BO94823 1461 aa22.68■■□□□ 1.22
CDK11B-204ENST00000407249 GPATCH8Q9UKJ3 1502 aaKnown RBP22.66■■□□□ 1.22
CDK11B-204ENST00000407249 ABCC5O15440 1437 aa22.65■■□□□ 1.22
CDK11B-204ENST00000407249 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.22
CDK11B-204ENST00000407249 PLEKHD1A6NEE1 506 aa22.64■■□□□ 1.21
CDK11B-204ENST00000407249 ABCC10Q5T3U5 1492 aa22.62■■□□□ 1.21
CDK11B-204ENST00000407249 ADGBQ8N7X0 1667 aa22.61■■□□□ 1.21
CDK11B-204ENST00000407249 CROCC2H7BZ55 1655 aa22.6■■□□□ 1.21
CDK11B-204ENST00000407249 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
CDK11B-204ENST00000407249 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
CDK11B-204ENST00000407249 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
CDK11B-204ENST00000407249 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.21
CDK11B-204ENST00000407249 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
CDK11B-204ENST00000407249 ADGRL2O95490 1459 aa22.57■■□□□ 1.2
CDK11B-204ENST00000407249 KDM6BO15054 1643 aa22.55■■□□□ 1.2
CDK11B-204ENST00000407249 KDM5BQ9UGL1 1544 aa22.54■■□□□ 1.2
CDK11B-204ENST00000407249 DEKP35659 375 aaKnown RBP22.54■■□□□ 1.2
CDK11B-204ENST00000407249 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
CDK11B-204ENST00000407249 SHANK2Q9UPX8 1470 aa22.53■■□□□ 1.2
CDK11B-204ENST00000407249 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.19
CDK11B-204ENST00000407249 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
CDK11B-204ENST00000407249 ARHGEF5Q12774 1597 aa22.48■■□□□ 1.19
CDK11B-204ENST00000407249 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
CDK11B-204ENST00000407249 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
CDK11B-204ENST00000407249 NCOA1Q15788 1441 aa22.47■■□□□ 1.19
CDK11B-204ENST00000407249 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
CDK11B-204ENST00000407249 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
CDK11B-204ENST00000407249 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
CDK11B-204ENST00000407249 WASHC2AQ641Q2 1341 aa22.45■■□□□ 1.18
CDK11B-204ENST00000407249 MSH5O43196 834 aa22.44■■□□□ 1.18
CDK11B-204ENST00000407249 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.44■■□□□ 1.18
CDK11B-204ENST00000407249 MPHOSPH9Q99550 1183 aa22.43■■□□□ 1.18
CDK11B-204ENST00000407249 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
CDK11B-204ENST00000407249 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
CDK11B-204ENST00000407249 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
CDK11B-204ENST00000407249 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
CDK11B-204ENST00000407249 CDC42BPBQ9Y5S2 1711 aa22.38■■□□□ 1.17
CDK11B-204ENST00000407249 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
CDK11B-204ENST00000407249 RSPH4AQ5TD94 716 aa22.37■■□□□ 1.17
CDK11B-204ENST00000407249 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
CDK11B-204ENST00000407249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDK11B-204ENST00000407249 CCDC141Q6ZP82 1450 aa22.35■■□□□ 1.17
CDK11B-204ENST00000407249 MYO5CQ9NQX4 1742 aa22.35■■□□□ 1.17
CDK11B-204ENST00000407249 ZCCHC11Q5TAX3 1644 aaKnown RBP22.35■■□□□ 1.17
CDK11B-204ENST00000407249 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDK11B-204ENST00000407249 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
CDK11B-204ENST00000407249 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
CDK11B-204ENST00000407249 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
CDK11B-204ENST00000407249 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
CDK11B-204ENST00000407249 ANKRD30BQ9BXX2 1392 aa22.33■■□□□ 1.17
CDK11B-204ENST00000407249 PZPP20742 1482 aa22.33■■□□□ 1.17
CDK11B-204ENST00000407249 ANKRD50Q9ULJ7 1429 aa22.33■■□□□ 1.16
CDK11B-204ENST00000407249 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.16
CDK11B-204ENST00000407249 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
CDK11B-204ENST00000407249 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
CDK11B-204ENST00000407249 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
CDK11B-204ENST00000407249 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
CDK11B-204ENST00000407249 KDM5DQ9BY66 1539 aa22.31■■□□□ 1.16
CDK11B-204ENST00000407249 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
CDK11B-204ENST00000407249 PPP4R2Q9NY27 417 aa22.29■■□□□ 1.16
CDK11B-204ENST00000407249 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
CDK11B-204ENST00000407249 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
CDK11B-204ENST00000407249 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
CDK11B-204ENST00000407249 PDE4CQ08493 712 aa22.28■■□□□ 1.16
CDK11B-204ENST00000407249 PRKRIP1Q9H875 184 aaPredicted RBP22.26■■□□□ 1.15
CDK11B-204ENST00000407249 PDIA4P13667 645 aaKnown RBP22.26■■□□□ 1.15
CDK11B-204ENST00000407249 L3MBTL2Q969R5 705 aa22.24■■□□□ 1.15
CDK11B-204ENST00000407249 C11orf95C9JLR9 678 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms