RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
LSP1-204ENST00000406638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.25
LSP1-204ENST00000406638 DDX10Q13206 875 aaKnown RBP22.88■■□□□ 1.25
LSP1-204ENST00000406638 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
LSP1-204ENST00000406638 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
LSP1-204ENST00000406638 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
LSP1-204ENST00000406638 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
LSP1-204ENST00000406638 TCOF1Q13428 1488 aaKnown RBP22.82■■□□□ 1.24
LSP1-204ENST00000406638 CFDP1Q9UEE9 299 aaPredicted RBP22.81■■□□□ 1.24
LSP1-204ENST00000406638 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
LSP1-204ENST00000406638 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
LSP1-204ENST00000406638 NAIPQ13075 1403 aa22.77■■□□□ 1.24
LSP1-204ENST00000406638 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
LSP1-204ENST00000406638 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
LSP1-204ENST00000406638 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
LSP1-204ENST00000406638 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
LSP1-204ENST00000406638 ERICH6Q7L0X2 663 aa22.74■■□□□ 1.23
LSP1-204ENST00000406638 ABCC5O15440 1437 aa22.73■■□□□ 1.23
LSP1-204ENST00000406638 ABCC10Q5T3U5 1492 aa22.73■■□□□ 1.23
LSP1-204ENST00000406638 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
LSP1-204ENST00000406638 DAPK1P53355 1430 aa22.71■■□□□ 1.23
LSP1-204ENST00000406638 KDM6BO15054 1643 aa22.71■■□□□ 1.23
LSP1-204ENST00000406638 CAMSAP2Q08AD1 1489 aa22.7■■□□□ 1.22
LSP1-204ENST00000406638 ADCY10Q96PN6 1610 aa22.7■■□□□ 1.22
LSP1-204ENST00000406638 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
LSP1-204ENST00000406638 PRKCSHP14314 528 aaPredicted RBP22.69■■□□□ 1.22
LSP1-204ENST00000406638 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
LSP1-204ENST00000406638 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
LSP1-204ENST00000406638 CDC42BPAQ5VT25 1732 aa22.65■■□□□ 1.22
LSP1-204ENST00000406638 PPP1R15AO75807 674 aaPredicted RBP22.64■■□□□ 1.22
LSP1-204ENST00000406638 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
LSP1-204ENST00000406638 DNMT1P26358 1616 aaKnown RBP22.61■■□□□ 1.21
LSP1-204ENST00000406638 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
LSP1-204ENST00000406638 TTC37Q6PGP7 1564 aa22.6■■□□□ 1.21
LSP1-204ENST00000406638 ITSN2Q9NZM3 1697 aa22.59■■□□□ 1.21
LSP1-204ENST00000406638 ANP32CO43423 234 aa22.59■■□□□ 1.21
LSP1-204ENST00000406638 FOXD1Q16676 465 aa22.59■■□□□ 1.21
LSP1-204ENST00000406638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.58■■□□□ 1.2
LSP1-204ENST00000406638 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
LSP1-204ENST00000406638 CCER2I3L3R5 266 aa22.57■■□□□ 1.2
LSP1-204ENST00000406638 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
LSP1-204ENST00000406638 UHRF1BP1LA0JNW5 1464 aa22.55■■□□□ 1.2
LSP1-204ENST00000406638 DEKP35659 375 aaKnown RBP22.54■■□□□ 1.2
LSP1-204ENST00000406638 DENND4BO75064 1496 aaPredicted RBP22.53■■□□□ 1.2
LSP1-204ENST00000406638 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
LSP1-204ENST00000406638 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
LSP1-204ENST00000406638 NCOA1Q15788 1441 aa22.51■■□□□ 1.19
LSP1-204ENST00000406638 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
LSP1-204ENST00000406638 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
LSP1-204ENST00000406638 ARHGAP5Q13017 1502 aa22.49■■□□□ 1.19
LSP1-204ENST00000406638 MBD5Q9P267 1494 aa22.48■■□□□ 1.19
LSP1-204ENST00000406638 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
LSP1-204ENST00000406638 PREX2Q70Z35 1606 aa22.47■■□□□ 1.19
LSP1-204ENST00000406638 C9orf84Q5VXU9 1444 aa22.45■■□□□ 1.18
LSP1-204ENST00000406638 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
LSP1-204ENST00000406638 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
LSP1-204ENST00000406638 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
LSP1-204ENST00000406638 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.183e-9■□□□□ 8.3
LSP1-204ENST00000406638 ARHGEF12Q9NZN5 1544 aa22.42■■□□□ 1.18
LSP1-204ENST00000406638 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
LSP1-204ENST00000406638 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
LSP1-204ENST00000406638 ANKRD30AQ9BXX3 1397 aa22.41■■□□□ 1.18
LSP1-204ENST00000406638 ASXL2Q76L83 1435 aa22.4■■□□□ 1.18
LSP1-204ENST00000406638 WDR7Q9Y4E6 1490 aa22.4■■□□□ 1.18
LSP1-204ENST00000406638 ADGRL2O95490 1459 aa22.39■■□□□ 1.17
LSP1-204ENST00000406638 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
LSP1-204ENST00000406638 PLCH2O75038 1416 aa22.39■■□□□ 1.17
LSP1-204ENST00000406638 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
LSP1-204ENST00000406638 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
LSP1-204ENST00000406638 ANKRD50Q9ULJ7 1429 aa22.37■■□□□ 1.17
LSP1-204ENST00000406638 NBR1Q14596 966 aa22.37■■□□□ 1.17
LSP1-204ENST00000406638 KIF15Q9NS87 1388 aa22.36■■□□□ 1.17
LSP1-204ENST00000406638 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
LSP1-204ENST00000406638 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
LSP1-204ENST00000406638 EFCAB2Q5VUJ9 269 aa22.34■■□□□ 1.17
LSP1-204ENST00000406638 AFAP1Q8N556 730 aa22.34■■□□□ 1.17
LSP1-204ENST00000406638 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.17
LSP1-204ENST00000406638 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.16
LSP1-204ENST00000406638 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.16
LSP1-204ENST00000406638 PZPP20742 1482 aa22.32■■□□□ 1.16
LSP1-204ENST00000406638 ARHGEF5Q12774 1597 aa22.32■■□□□ 1.16
LSP1-204ENST00000406638 SHANK2Q9UPX8 1470 aa22.32■■□□□ 1.16
LSP1-204ENST00000406638 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
LSP1-204ENST00000406638 PPP4R2Q9NY27 417 aa22.29■■□□□ 1.16
LSP1-204ENST00000406638 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
LSP1-204ENST00000406638 NUP155O75694 1391 aa22.27■■□□□ 1.16
LSP1-204ENST00000406638 PKD2Q13563 968 aa22.27■■□□□ 1.16
LSP1-204ENST00000406638 TIMELESSQ9UNS1 1208 aa22.27■■□□□ 1.15
LSP1-204ENST00000406638 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
LSP1-204ENST00000406638 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
LSP1-204ENST00000406638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
LSP1-204ENST00000406638 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
LSP1-204ENST00000406638 KIAA1107Q9UPP5 1409 aa22.25■■□□□ 1.15
LSP1-204ENST00000406638 ABCC1P33527 1531 aa22.23■■□□□ 1.15
LSP1-204ENST00000406638 FANCAO15360 1455 aa22.23■■□□□ 1.15
LSP1-204ENST00000406638 RSPH4AQ5TD94 716 aa22.23■■□□□ 1.15
LSP1-204ENST00000406638 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
LSP1-204ENST00000406638 PLEKHH2Q8IVE3 1493 aa22.2■■□□□ 1.14
LSP1-204ENST00000406638 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.14
LSP1-204ENST00000406638 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms