RNA–Protein interactions for RNA: ENST00000405742.7

TCN2-202, Transcript of transcobalamin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCN2, Length 1,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-202ENST00000405742 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
TCN2-202ENST00000405742 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
TCN2-202ENST00000405742 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.86
TCN2-202ENST00000405742 ADGBQ8N7X0 1667 aa20.37■□□□□ 0.85
TCN2-202ENST00000405742 ATP10BO94823 1461 aa20.36■□□□□ 0.85
TCN2-202ENST00000405742 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
TCN2-202ENST00000405742 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
TCN2-202ENST00000405742 CFDP1Q9UEE9 299 aaPredicted RBP20.35■□□□□ 0.85
TCN2-202ENST00000405742 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
TCN2-202ENST00000405742 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
TCN2-202ENST00000405742 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
TCN2-202ENST00000405742 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
TCN2-202ENST00000405742 SHROOM2Q13796 1616 aa20.34■□□□□ 0.85
TCN2-202ENST00000405742 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
TCN2-202ENST00000405742 PTPRGP23470 1445 aa20.33■□□□□ 0.84
TCN2-202ENST00000405742 ABCC10Q5T3U5 1492 aa20.31■□□□□ 0.84
TCN2-202ENST00000405742 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
TCN2-202ENST00000405742 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
TCN2-202ENST00000405742 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
TCN2-202ENST00000405742 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
TCN2-202ENST00000405742 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
TCN2-202ENST00000405742 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
TCN2-202ENST00000405742 ANKRD30AQ9BXX3 1397 aa20.22■□□□□ 0.83
TCN2-202ENST00000405742 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
TCN2-202ENST00000405742 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
TCN2-202ENST00000405742 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
TCN2-202ENST00000405742 ARHGEF5Q12774 1597 aa20.18■□□□□ 0.82
TCN2-202ENST00000405742 RPRD2Q5VT52 1461 aaKnown RBP20.18■□□□□ 0.82
TCN2-202ENST00000405742 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
TCN2-202ENST00000405742 PZPP20742 1482 aa20.16■□□□□ 0.82
TCN2-202ENST00000405742 ABCC2Q92887 1545 aa20.16■□□□□ 0.82
TCN2-202ENST00000405742 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
TCN2-202ENST00000405742 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
TCN2-202ENST00000405742 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
TCN2-202ENST00000405742 C9orf84Q5VXU9 1444 aa20.15■□□□□ 0.82
TCN2-202ENST00000405742 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.81
TCN2-202ENST00000405742 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
TCN2-202ENST00000405742 FOXD1Q16676 465 aa20.13■□□□□ 0.81
TCN2-202ENST00000405742 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
TCN2-202ENST00000405742 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
TCN2-202ENST00000405742 TEX14Q8IWB6 1497 aa20.1■□□□□ 0.81
TCN2-202ENST00000405742 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
TCN2-202ENST00000405742 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
TCN2-202ENST00000405742 MBD5Q9P267 1494 aa20.09■□□□□ 0.81
TCN2-202ENST00000405742 L3MBTL2Q969R5 705 aa20.09■□□□□ 0.81
TCN2-202ENST00000405742 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
TCN2-202ENST00000405742 KIAA1107Q9UPP5 1409 aa20.08■□□□□ 0.81
TCN2-202ENST00000405742 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
TCN2-202ENST00000405742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.8
TCN2-202ENST00000405742 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
TCN2-202ENST00000405742 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
TCN2-202ENST00000405742 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
TCN2-202ENST00000405742 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
TCN2-202ENST00000405742 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
TCN2-202ENST00000405742 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
TCN2-202ENST00000405742 ZCCHC11Q5TAX3 1644 aaKnown RBP20.03■□□□□ 0.8
TCN2-202ENST00000405742 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.8
TCN2-202ENST00000405742 MAST1Q9Y2H9 1570 aa20.03■□□□□ 0.8
TCN2-202ENST00000405742 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
TCN2-202ENST00000405742 ANP32CO43423 234 aa20.01■□□□□ 0.79
TCN2-202ENST00000405742 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
TCN2-202ENST00000405742 SYCP2Q9BX26 1530 aa20.01■□□□□ 0.79
TCN2-202ENST00000405742 PLEKHH2Q8IVE3 1493 aa20■□□□□ 0.79
TCN2-202ENST00000405742 PKD2Q13563 968 aa20■□□□□ 0.79
TCN2-202ENST00000405742 NUP155O75694 1391 aa19.99■□□□□ 0.79
TCN2-202ENST00000405742 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
TCN2-202ENST00000405742 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
TCN2-202ENST00000405742 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
TCN2-202ENST00000405742 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
TCN2-202ENST00000405742 POLR1AO95602 1720 aaPredicted RBP19.93■□□□□ 0.78
TCN2-202ENST00000405742 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
TCN2-202ENST00000405742 PLCH2O75038 1416 aa19.92■□□□□ 0.78
TCN2-202ENST00000405742 UNC13BO14795 1591 aa19.91■□□□□ 0.78
TCN2-202ENST00000405742 FAM135AQ9P2D6 1515 aa19.9■□□□□ 0.78
TCN2-202ENST00000405742 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
TCN2-202ENST00000405742 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
TCN2-202ENST00000405742 CNTLNQ9NXG0 1405 aa19.86■□□□□ 0.77
TCN2-202ENST00000405742 ABCC1P33527 1531 aa19.86■□□□□ 0.77
TCN2-202ENST00000405742 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
TCN2-202ENST00000405742 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
TCN2-202ENST00000405742 CCDC7Q96M83 1385 aa19.86■□□□□ 0.77
TCN2-202ENST00000405742 EFCAB2Q5VUJ9 269 aa19.85■□□□□ 0.77
TCN2-202ENST00000405742 UHRF1BP1Q6BDS2 1440 aa19.85■□□□□ 0.77
TCN2-202ENST00000405742 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.77
TCN2-202ENST00000405742 ERBINQ96RT1 1412 aa19.82■□□□□ 0.76
TCN2-202ENST00000405742 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
TCN2-202ENST00000405742 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
TCN2-202ENST00000405742 KDM5CP41229 1560 aa19.8■□□□□ 0.76
TCN2-202ENST00000405742 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
TCN2-202ENST00000405742 C11orf95C9JLR9 678 aaPredicted RBP19.78■□□□□ 0.76
TCN2-202ENST00000405742 USP47Q96K76 1375 aa19.77■□□□□ 0.76
TCN2-202ENST00000405742 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
TCN2-202ENST00000405742 CCDC144AA2RUR9 1427 aa19.76■□□□□ 0.75
TCN2-202ENST00000405742 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
TCN2-202ENST00000405742 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
TCN2-202ENST00000405742 KIF7Q2M1P5 1343 aa19.75■□□□□ 0.75
TCN2-202ENST00000405742 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
TCN2-202ENST00000405742 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
TCN2-202ENST00000405742 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
TCN2-202ENST00000405742 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms