RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 PTPRGP23470 1445 aa18.54■□□□□ 0.56
PRAME-203ENST00000402697 ATP10BO94823 1461 aa18.52■□□□□ 0.56
PRAME-203ENST00000402697 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.55
PRAME-203ENST00000402697 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
PRAME-203ENST00000402697 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
PRAME-203ENST00000402697 CCER2I3L3R5 266 aa18.45■□□□□ 0.54
PRAME-203ENST00000402697 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
PRAME-203ENST00000402697 DAPK1P53355 1430 aa18.43■□□□□ 0.54
PRAME-203ENST00000402697 GPATCH8Q9UKJ3 1502 aaKnown RBP18.43■□□□□ 0.54
PRAME-203ENST00000402697 ABCC10Q5T3U5 1492 aa18.43■□□□□ 0.54
PRAME-203ENST00000402697 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
PRAME-203ENST00000402697 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
PRAME-203ENST00000402697 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
PRAME-203ENST00000402697 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
PRAME-203ENST00000402697 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.54
PRAME-203ENST00000402697 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
PRAME-203ENST00000402697 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
PRAME-203ENST00000402697 ABCC5O15440 1437 aa18.38■□□□□ 0.53
PRAME-203ENST00000402697 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
PRAME-203ENST00000402697 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
PRAME-203ENST00000402697 ANP32CO43423 234 aa18.37■□□□□ 0.53
PRAME-203ENST00000402697 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
PRAME-203ENST00000402697 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
PRAME-203ENST00000402697 ZCCHC11Q5TAX3 1644 aaKnown RBP18.35■□□□□ 0.53
PRAME-203ENST00000402697 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
PRAME-203ENST00000402697 KDM6BO15054 1643 aa18.34■□□□□ 0.53
PRAME-203ENST00000402697 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
PRAME-203ENST00000402697 PREX2Q70Z35 1606 aa18.33■□□□□ 0.53
PRAME-203ENST00000402697 ADGRL2O95490 1459 aa18.33■□□□□ 0.52
PRAME-203ENST00000402697 CDC42BPBQ9Y5S2 1711 aa18.33■□□□□ 0.52
PRAME-203ENST00000402697 CFDP1Q9UEE9 299 aaPredicted RBP18.32■□□□□ 0.52
PRAME-203ENST00000402697 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
PRAME-203ENST00000402697 RPRD2Q5VT52 1461 aaKnown RBP18.3■□□□□ 0.52
PRAME-203ENST00000402697 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
PRAME-203ENST00000402697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.527e-13■□□□□ 11.3
PRAME-203ENST00000402697 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
PRAME-203ENST00000402697 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
PRAME-203ENST00000402697 NCOA1Q15788 1441 aa18.26■□□□□ 0.51
PRAME-203ENST00000402697 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRAME-203ENST00000402697 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
PRAME-203ENST00000402697 ZNF777Q9ULD5 760 aaPredicted RBP18.24■□□□□ 0.51
PRAME-203ENST00000402697 ANKRD30AQ9BXX3 1397 aa18.24■□□□□ 0.51
PRAME-203ENST00000402697 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
PRAME-203ENST00000402697 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
PRAME-203ENST00000402697 TEX14Q8IWB6 1497 aa18.21■□□□□ 0.51
PRAME-203ENST00000402697 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
PRAME-203ENST00000402697 L3MBTL2Q969R5 705 aa18.2■□□□□ 0.5
PRAME-203ENST00000402697 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
PRAME-203ENST00000402697 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
PRAME-203ENST00000402697 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
PRAME-203ENST00000402697 PZPP20742 1482 aa18.19■□□□□ 0.5
PRAME-203ENST00000402697 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
PRAME-203ENST00000402697 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
PRAME-203ENST00000402697 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
PRAME-203ENST00000402697 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
PRAME-203ENST00000402697 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
PRAME-203ENST00000402697 C9orf84Q5VXU9 1444 aa18.16■□□□□ 0.5
PRAME-203ENST00000402697 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
PRAME-203ENST00000402697 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.5
PRAME-203ENST00000402697 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.5
PRAME-203ENST00000402697 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.5
PRAME-203ENST00000402697 CNTLNQ9NXG0 1405 aa18.14■□□□□ 0.49
PRAME-203ENST00000402697 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
PRAME-203ENST00000402697 ANKRD50Q9ULJ7 1429 aa18.13■□□□□ 0.49
PRAME-203ENST00000402697 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
PRAME-203ENST00000402697 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
PRAME-203ENST00000402697 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
PRAME-203ENST00000402697 FOXD1Q16676 465 aa18.11■□□□□ 0.49
PRAME-203ENST00000402697 PLCH2O75038 1416 aa18.1■□□□□ 0.49
PRAME-203ENST00000402697 CCDC7Q96M83 1385 aa18.1■□□□□ 0.49
PRAME-203ENST00000402697 ARAP3Q8WWN8 1544 aa18.09■□□□□ 0.49
PRAME-203ENST00000402697 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.493e-11■□□□□ 9.5
PRAME-203ENST00000402697 ARID4BQ4LE39 1312 aaPredicted RBP18.09■□□□□ 0.49
PRAME-203ENST00000402697 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
PRAME-203ENST00000402697 ABCA9Q8IUA7 1624 aa18.08■□□□□ 0.49
PRAME-203ENST00000402697 TSPY4P0CV99 314 aa18.08■□□□□ 0.49
PRAME-203ENST00000402697 TSPY10P0CW01 314 aa18.08■□□□□ 0.49
PRAME-203ENST00000402697 ABCC1P33527 1531 aa18.08■□□□□ 0.48
PRAME-203ENST00000402697 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
PRAME-203ENST00000402697 NEFLP07196 543 aa18.07■□□□□ 0.48
PRAME-203ENST00000402697 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
PRAME-203ENST00000402697 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
PRAME-203ENST00000402697 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
PRAME-203ENST00000402697 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
PRAME-203ENST00000402697 MYT1Q01538 1121 aa18.04■□□□□ 0.48
PRAME-203ENST00000402697 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
PRAME-203ENST00000402697 PKD2Q13563 968 aa18.02■□□□□ 0.47
PRAME-203ENST00000402697 NUP155O75694 1391 aa17.99■□□□□ 0.47
PRAME-203ENST00000402697 RALGAPBQ86X10 1494 aa17.98■□□□□ 0.47
PRAME-203ENST00000402697 EFCAB2Q5VUJ9 269 aa17.98■□□□□ 0.47
PRAME-203ENST00000402697 PRKRIP1Q9H875 184 aaPredicted RBP17.97■□□□□ 0.47
PRAME-203ENST00000402697 ROCK2O75116 1388 aaKnown RBP17.97■□□□□ 0.47
PRAME-203ENST00000402697 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.47
PRAME-203ENST00000402697 UNC13BO14795 1591 aa17.96■□□□□ 0.47
PRAME-203ENST00000402697 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.46
PRAME-203ENST00000402697 FANCAO15360 1455 aa17.95■□□□□ 0.46
PRAME-203ENST00000402697 FKBP8Q14318 412 aa17.95■□□□□ 0.46
PRAME-203ENST00000402697 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
PRAME-203ENST00000402697 KDM5CP41229 1560 aa17.94■□□□□ 0.46
PRAME-203ENST00000402697 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms