RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
CACNA1C-211ENST00000399617 TMF1P82094 1093 aa17.89■□□□□ 0.45
CACNA1C-211ENST00000399617 PKD2Q13563 968 aa17.89■□□□□ 0.45
CACNA1C-211ENST00000399617 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
CACNA1C-211ENST00000399617 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
CACNA1C-211ENST00000399617 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
CACNA1C-211ENST00000399617 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
CACNA1C-211ENST00000399617 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
CACNA1C-211ENST00000399617 EVA1CP58658 441 aa17.85■□□□□ 0.45
CACNA1C-211ENST00000399617 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
CACNA1C-211ENST00000399617 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
CACNA1C-211ENST00000399617 SOGA1O94964 1423 aa17.8■□□□□ 0.44
CACNA1C-211ENST00000399617 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
CACNA1C-211ENST00000399617 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
CACNA1C-211ENST00000399617 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
CACNA1C-211ENST00000399617 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
CACNA1C-211ENST00000399617 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
CACNA1C-211ENST00000399617 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
CACNA1C-211ENST00000399617 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
CACNA1C-211ENST00000399617 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
CACNA1C-211ENST00000399617 NACADO15069 1562 aa17.78■□□□□ 0.44
CACNA1C-211ENST00000399617 CARMIL2Q6F5E8 1435 aa17.77■□□□□ 0.43
CACNA1C-211ENST00000399617 AMPHP49418 695 aa17.77■□□□□ 0.43
CACNA1C-211ENST00000399617 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
CACNA1C-211ENST00000399617 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
CACNA1C-211ENST00000399617 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
CACNA1C-211ENST00000399617 EEA1Q15075 1411 aa17.75■□□□□ 0.43
CACNA1C-211ENST00000399617 BECN1Q14457 450 aa17.74■□□□□ 0.43
CACNA1C-211ENST00000399617 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
CACNA1C-211ENST00000399617 PDE4CQ08493 712 aa17.74■□□□□ 0.43
CACNA1C-211ENST00000399617 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
CACNA1C-211ENST00000399617 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
CACNA1C-211ENST00000399617 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
CACNA1C-211ENST00000399617 SLC4A10Q6U841 1118 aa17.73■□□□□ 0.43
CACNA1C-211ENST00000399617 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
CACNA1C-211ENST00000399617 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
CACNA1C-211ENST00000399617 KANK4Q5T7N3 995 aaPredicted RBP17.72■□□□□ 0.43
CACNA1C-211ENST00000399617 FBXW7Q969H0 707 aa17.71■□□□□ 0.43
CACNA1C-211ENST00000399617 NUP155O75694 1391 aa17.71■□□□□ 0.43
CACNA1C-211ENST00000399617 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
CACNA1C-211ENST00000399617 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.42
CACNA1C-211ENST00000399617 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
CACNA1C-211ENST00000399617 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
CACNA1C-211ENST00000399617 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
CACNA1C-211ENST00000399617 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 RAD21O60216 631 aa17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
CACNA1C-211ENST00000399617 NUTM2GQ5VZR2 741 aa17.66■□□□□ 0.42
CACNA1C-211ENST00000399617 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
CACNA1C-211ENST00000399617 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
CACNA1C-211ENST00000399617 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.42
CACNA1C-211ENST00000399617 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
CACNA1C-211ENST00000399617 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-211ENST00000399617 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
CACNA1C-211ENST00000399617 PRM3Q9NNZ6 103 aa17.63■□□□□ 0.41
CACNA1C-211ENST00000399617 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
CACNA1C-211ENST00000399617 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
CACNA1C-211ENST00000399617 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 TRIM44Q96DX7 344 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-211ENST00000399617 MPHOSPH9Q99550 1183 aa17.59■□□□□ 0.41
CACNA1C-211ENST00000399617 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.41
CACNA1C-211ENST00000399617 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.4
CACNA1C-211ENST00000399617 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
CACNA1C-211ENST00000399617 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
CACNA1C-211ENST00000399617 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
CACNA1C-211ENST00000399617 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
CACNA1C-211ENST00000399617 PSME1Q06323 249 aa17.56■□□□□ 0.4
CACNA1C-211ENST00000399617 STK31Q9BXU1 1019 aa17.56■□□□□ 0.4
CACNA1C-211ENST00000399617 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
CACNA1C-211ENST00000399617 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
CACNA1C-211ENST00000399617 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
CACNA1C-211ENST00000399617 TRIM6-TRIM34B2RNG4 842 aa17.55■□□□□ 0.4
CACNA1C-211ENST00000399617 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
CACNA1C-211ENST00000399617 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-211ENST00000399617 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
CACNA1C-211ENST00000399617 CREBRFQ8IUR6 639 aa17.53■□□□□ 0.4
CACNA1C-211ENST00000399617 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
CACNA1C-211ENST00000399617 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.39
CACNA1C-211ENST00000399617 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.39
CACNA1C-211ENST00000399617 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.39
CACNA1C-211ENST00000399617 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
CACNA1C-211ENST00000399617 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
CACNA1C-211ENST00000399617 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
CACNA1C-211ENST00000399617 ATF3P18847 181 aa17.49■□□□□ 0.39
CACNA1C-211ENST00000399617 KTN1Q86UP2 1357 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-211ENST00000399617 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-211ENST00000399617 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
CACNA1C-211ENST00000399617 MS4A1P11836 297 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms