RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
PTPN6-202ENST00000399448 FBLN2P98095 1184 aa19.4■□□□□ 0.7
PTPN6-202ENST00000399448 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
PTPN6-202ENST00000399448 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
PTPN6-202ENST00000399448 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
PTPN6-202ENST00000399448 ZNF644Q9H582 1327 aaPredicted RBP19.38■□□□□ 0.69
PTPN6-202ENST00000399448 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
PTPN6-202ENST00000399448 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
PTPN6-202ENST00000399448 ANP32CO43423 234 aa19.33■□□□□ 0.69
PTPN6-202ENST00000399448 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.69
PTPN6-202ENST00000399448 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
PTPN6-202ENST00000399448 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.68
PTPN6-202ENST00000399448 GPATCH8Q9UKJ3 1502 aaKnown RBP19.32■□□□□ 0.68
PTPN6-202ENST00000399448 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
PTPN6-202ENST00000399448 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
PTPN6-202ENST00000399448 ABCA8O94911 1581 aa19.28■□□□□ 0.68
PTPN6-202ENST00000399448 L3MBTL2Q969R5 705 aa19.27■□□□□ 0.68
PTPN6-202ENST00000399448 KIF14Q15058 1648 aa19.27■□□□□ 0.68
PTPN6-202ENST00000399448 FOXD1Q16676 465 aa19.27■□□□□ 0.68
PTPN6-202ENST00000399448 PLEKHD1A6NEE1 506 aa19.26■□□□□ 0.67
PTPN6-202ENST00000399448 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
PTPN6-202ENST00000399448 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
PTPN6-202ENST00000399448 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
PTPN6-202ENST00000399448 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
PTPN6-202ENST00000399448 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
PTPN6-202ENST00000399448 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
PTPN6-202ENST00000399448 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPN6-202ENST00000399448 ATP10BO94823 1461 aa19.23■□□□□ 0.67
PTPN6-202ENST00000399448 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
PTPN6-202ENST00000399448 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
PTPN6-202ENST00000399448 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
PTPN6-202ENST00000399448 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
PTPN6-202ENST00000399448 PZPP20742 1482 aa19.19■□□□□ 0.66
PTPN6-202ENST00000399448 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
PTPN6-202ENST00000399448 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
PTPN6-202ENST00000399448 TEX14Q8IWB6 1497 aa19.17■□□□□ 0.66
PTPN6-202ENST00000399448 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
PTPN6-202ENST00000399448 PTPRGP23470 1445 aa19.15■□□□□ 0.66
PTPN6-202ENST00000399448 NBPF8Q3BBV2 869 aa19.14■□□□□ 0.65
PTPN6-202ENST00000399448 KIAA1107Q9UPP5 1409 aa19.13■□□□□ 0.65
PTPN6-202ENST00000399448 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
PTPN6-202ENST00000399448 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
PTPN6-202ENST00000399448 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
PTPN6-202ENST00000399448 TSPY4P0CV99 314 aa19.09■□□□□ 0.65
PTPN6-202ENST00000399448 TSPY10P0CW01 314 aa19.09■□□□□ 0.65
PTPN6-202ENST00000399448 PKD2Q13563 968 aa19.08■□□□□ 0.65
PTPN6-202ENST00000399448 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
PTPN6-202ENST00000399448 CCDC7Q96M83 1385 aa19.07■□□□□ 0.64
PTPN6-202ENST00000399448 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
PTPN6-202ENST00000399448 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
PTPN6-202ENST00000399448 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
PTPN6-202ENST00000399448 CHD1O14646 1710 aa19.04■□□□□ 0.64
PTPN6-202ENST00000399448 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
PTPN6-202ENST00000399448 NUP155O75694 1391 aa19.04■□□□□ 0.64
PTPN6-202ENST00000399448 MYT1Q01538 1121 aa19.03■□□□□ 0.64
PTPN6-202ENST00000399448 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPN6-202ENST00000399448 RSPH4AQ5TD94 716 aa19.03■□□□□ 0.64
PTPN6-202ENST00000399448 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.63
PTPN6-202ENST00000399448 SHROOM2Q13796 1616 aa19.01■□□□□ 0.63
PTPN6-202ENST00000399448 KIF15Q9NS87 1388 aa19■□□□□ 0.63
PTPN6-202ENST00000399448 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
PTPN6-202ENST00000399448 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
PTPN6-202ENST00000399448 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
PTPN6-202ENST00000399448 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
PTPN6-202ENST00000399448 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
PTPN6-202ENST00000399448 FKBP8Q14318 412 aa18.98■□□□□ 0.63
PTPN6-202ENST00000399448 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
PTPN6-202ENST00000399448 NEFLP07196 543 aa18.96■□□□□ 0.63
PTPN6-202ENST00000399448 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
PTPN6-202ENST00000399448 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
PTPN6-202ENST00000399448 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTPN6-202ENST00000399448 ARHGEF12Q9NZN5 1544 aa18.92■□□□□ 0.62
PTPN6-202ENST00000399448 USP47Q96K76 1375 aa18.92■□□□□ 0.62
PTPN6-202ENST00000399448 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
PTPN6-202ENST00000399448 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
PTPN6-202ENST00000399448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPN6-202ENST00000399448 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
PTPN6-202ENST00000399448 MAST1Q9Y2H9 1570 aa18.9■□□□□ 0.62
PTPN6-202ENST00000399448 ARHGAP5Q13017 1502 aa18.89■□□□□ 0.62
PTPN6-202ENST00000399448 RALGAPBQ86X10 1494 aa18.89■□□□□ 0.61
PTPN6-202ENST00000399448 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.61
PTPN6-202ENST00000399448 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
PTPN6-202ENST00000399448 KDM5CP41229 1560 aa18.88■□□□□ 0.61
PTPN6-202ENST00000399448 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
PTPN6-202ENST00000399448 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
PTPN6-202ENST00000399448 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
PTPN6-202ENST00000399448 BCANQ96GW7 911 aa18.87■□□□□ 0.61
PTPN6-202ENST00000399448 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
PTPN6-202ENST00000399448 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
PTPN6-202ENST00000399448 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
PTPN6-202ENST00000399448 MYO5CQ9NQX4 1742 aa18.84■□□□□ 0.61
PTPN6-202ENST00000399448 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
PTPN6-202ENST00000399448 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
PTPN6-202ENST00000399448 UNC13BO14795 1591 aa18.82■□□□□ 0.6
PTPN6-202ENST00000399448 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
PTPN6-202ENST00000399448 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
PTPN6-202ENST00000399448 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
PTPN6-202ENST00000399448 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
PTPN6-202ENST00000399448 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
PTPN6-202ENST00000399448 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms