RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 BBXQ8WY36 941 aaPredicted RBP14.42□□□□□ -0.1
ITSN1-207ENST00000399338 NAP1L2Q9ULW6 460 aaPredicted RBP14.41□□□□□ -0.1
ITSN1-207ENST00000399338 SMAP1Q8IYB5 467 aaPredicted RBP14.4□□□□□ -0.1
ITSN1-207ENST00000399338 PANK2Q9BZ23 570 aa14.4□□□□□ -0.1
ITSN1-207ENST00000399338 ESPNB1AK53 854 aa14.39□□□□□ -0.11
ITSN1-207ENST00000399338 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
ITSN1-207ENST00000399338 NCOA1Q15788 1441 aa14.39□□□□□ -0.11
ITSN1-207ENST00000399338 GOLGA6L3A6NEY3 463 aa14.39□□□□□ -0.11
ITSN1-207ENST00000399338 ERBB4Q15303 1308 aa14.39□□□□□ -0.11
ITSN1-207ENST00000399338 STAC3Q96MF2 364 aa14.38□□□□□ -0.11
ITSN1-207ENST00000399338 CCDC7Q96M83 1385 aa14.38□□□□□ -0.11
ITSN1-207ENST00000399338 SKAP1Q86WV1 359 aa14.37□□□□□ -0.11
ITSN1-207ENST00000399338 MAP3K1Q13233 1512 aa14.37□□□□□ -0.11
ITSN1-207ENST00000399338 ABCA5Q8WWZ7 1642 aa14.36□□□□□ -0.11
ITSN1-207ENST00000399338 AEBP2Q6ZN18 517 aaPredicted RBP14.35□□□□□ -0.11
ITSN1-207ENST00000399338 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
ITSN1-207ENST00000399338 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
ITSN1-207ENST00000399338 FAM161AQ3B820 660 aa14.33□□□□□ -0.11
ITSN1-207ENST00000399338 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
ITSN1-207ENST00000399338 CHMP4BQ9H444 224 aaKnown RBP14.32□□□□□ -0.12
ITSN1-207ENST00000399338 RIPK4P57078 832 aa14.32□□□□□ -0.12
ITSN1-207ENST00000399338 IPO4Q8TEX9 1081 aaKnown RBP14.32□□□□□ -0.12
ITSN1-207ENST00000399338 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
ITSN1-207ENST00000399338 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
ITSN1-207ENST00000399338 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
ITSN1-207ENST00000399338 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
ITSN1-207ENST00000399338 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
ITSN1-207ENST00000399338 PHLDB1Q86UU1 1377 aa14.3□□□□□ -0.12
ITSN1-207ENST00000399338 TIAM1Q13009 1591 aa14.3□□□□□ -0.12
ITSN1-207ENST00000399338 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
ITSN1-207ENST00000399338 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
ITSN1-207ENST00000399338 POLR1AO95602 1720 aaPredicted RBP14.3□□□□□ -0.12
ITSN1-207ENST00000399338 MRE11P49959 708 aa14.3□□□□□ -0.12
ITSN1-207ENST00000399338 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
ITSN1-207ENST00000399338 TERF1P54274 439 aa14.29□□□□□ -0.12
ITSN1-207ENST00000399338 ARXQ96QS3 562 aa14.29□□□□□ -0.12
ITSN1-207ENST00000399338 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
ITSN1-207ENST00000399338 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
ITSN1-207ENST00000399338 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
ITSN1-207ENST00000399338 MYOM3Q5VTT5 1437 aa14.27□□□□□ -0.13
ITSN1-207ENST00000399338 DMTNQ08495 405 aa14.27□□□□□ -0.13
ITSN1-207ENST00000399338 MYH16Q9H6N6 1097 aa14.27□□□□□ -0.13
ITSN1-207ENST00000399338 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
ITSN1-207ENST00000399338 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
ITSN1-207ENST00000399338 UACAQ9BZF9 1416 aa14.26□□□□□ -0.13
ITSN1-207ENST00000399338 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
ITSN1-207ENST00000399338 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
ITSN1-207ENST00000399338 FAM50AQ14320 339 aaKnown RBP14.25□□□□□ -0.13
ITSN1-207ENST00000399338 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
ITSN1-207ENST00000399338 DHX29Q7Z478 1369 aaKnown RBP14.24□□□□□ -0.13
ITSN1-207ENST00000399338 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
ITSN1-207ENST00000399338 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
ITSN1-207ENST00000399338 OFD1O75665 1012 aa14.24□□□□□ -0.13
ITSN1-207ENST00000399338 USP19O94966 1318 aa14.23□□□□□ -0.13
ITSN1-207ENST00000399338 GRPEL1Q9HAV7 217 aa14.23□□□□□ -0.13
ITSN1-207ENST00000399338 VIRMAQ69YN4 1812 aaKnown RBP14.23□□□□□ -0.13
ITSN1-207ENST00000399338 SENP3-EIF4A1A0A087X0R7 540 aa14.22□□□□□ -0.13
ITSN1-207ENST00000399338 TMEM51Q9NW97 253 aa14.22□□□□□ -0.13
ITSN1-207ENST00000399338 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
ITSN1-207ENST00000399338 CCDC18Q5T9S5 1454 aa14.22□□□□□ -0.13
ITSN1-207ENST00000399338 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
ITSN1-207ENST00000399338 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
ITSN1-207ENST00000399338 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
ITSN1-207ENST00000399338 CRBNQ96SW2 442 aa14.21□□□□□ -0.14
ITSN1-207ENST00000399338 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.14
ITSN1-207ENST00000399338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.14
ITSN1-207ENST00000399338 ZNF326Q5BKZ1 582 aaKnown RBP14.2□□□□□ -0.14
ITSN1-207ENST00000399338 MTERF4Q7Z6M4 381 aaKnown RBP14.2□□□□□ -0.14
ITSN1-207ENST00000399338 TRIM44Q96DX7 344 aaPredicted RBP14.2□□□□□ -0.14
ITSN1-207ENST00000399338 ZSCAN20P17040 1043 aaPredicted RBP14.19□□□□□ -0.14
ITSN1-207ENST00000399338 PPP4R3BQ5MIZ7 849 aa14.19□□□□□ -0.14
ITSN1-207ENST00000399338 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
ITSN1-207ENST00000399338 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
ITSN1-207ENST00000399338 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
ITSN1-207ENST00000399338 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
ITSN1-207ENST00000399338 MCM4P33991 863 aa14.19□□□□□ -0.14
ITSN1-207ENST00000399338 BECN1Q14457 450 aa14.18□□□□□ -0.14
ITSN1-207ENST00000399338 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
ITSN1-207ENST00000399338 SPATA31E1Q6ZUB1 1445 aa14.17□□□□□ -0.14
ITSN1-207ENST00000399338 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
ITSN1-207ENST00000399338 PLIN1O60240 522 aa14.15□□□□□ -0.14
ITSN1-207ENST00000399338 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
ITSN1-207ENST00000399338 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
ITSN1-207ENST00000399338 TRAK2O60296 914 aa14.15□□□□□ -0.14
ITSN1-207ENST00000399338 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
ITSN1-207ENST00000399338 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
ITSN1-207ENST00000399338 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
ITSN1-207ENST00000399338 FOXD1Q16676 465 aa14.14□□□□□ -0.15
ITSN1-207ENST00000399338 KIF20AO95235 890 aa14.14□□□□□ -0.15
ITSN1-207ENST00000399338 ZSCAN30Q86W11 494 aa14.13□□□□□ -0.15
ITSN1-207ENST00000399338 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
ITSN1-207ENST00000399338 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
ITSN1-207ENST00000399338 CCDC94Q9BW85 323 aaPredicted RBP14.11□□□□□ -0.15
ITSN1-207ENST00000399338 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
ITSN1-207ENST00000399338 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
ITSN1-207ENST00000399338 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
ITSN1-207ENST00000399338 DYNC1I1O14576 645 aa14.1□□□□□ -0.15
ITSN1-207ENST00000399338 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
ITSN1-207ENST00000399338 PPP1R9BQ96SB3 815 aa14.09□□□□□ -0.15
ITSN1-207ENST00000399338 R3HCC1Q9Y3T6 440 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms