RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MSH5O43196 834 aa14.34□□□□□ -0.11
HMGCLL1-205ENST00000398661 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
HMGCLL1-205ENST00000398661 ABCC2Q92887 1545 aa14.33□□□□□ -0.12
HMGCLL1-205ENST00000398661 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
HMGCLL1-205ENST00000398661 SUPT6HQ7KZ85 1726 aaKnown RBP14.32□□□□□ -0.12
HMGCLL1-205ENST00000398661 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGCLL1-205ENST00000398661 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
HMGCLL1-205ENST00000398661 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGCLL1-205ENST00000398661 GPATCH8Q9UKJ3 1502 aaKnown RBP14.28□□□□□ -0.12
HMGCLL1-205ENST00000398661 ERICH6Q7L0X2 663 aa14.28□□□□□ -0.12
HMGCLL1-205ENST00000398661 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.12
HMGCLL1-205ENST00000398661 NEFLP07196 543 aa14.27□□□□□ -0.13
HMGCLL1-205ENST00000398661 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
HMGCLL1-205ENST00000398661 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
HMGCLL1-205ENST00000398661 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
HMGCLL1-205ENST00000398661 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
HMGCLL1-205ENST00000398661 PTPN23Q9H3S7 1636 aa14.25□□□□□ -0.13
HMGCLL1-205ENST00000398661 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
HMGCLL1-205ENST00000398661 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
HMGCLL1-205ENST00000398661 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
HMGCLL1-205ENST00000398661 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
HMGCLL1-205ENST00000398661 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
HMGCLL1-205ENST00000398661 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
HMGCLL1-205ENST00000398661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.13
HMGCLL1-205ENST00000398661 FOXD1Q16676 465 aa14.19□□□□□ -0.14
HMGCLL1-205ENST00000398661 AFAP1Q8N556 730 aa14.19□□□□□ -0.14
HMGCLL1-205ENST00000398661 CAMSAP2Q08AD1 1489 aa14.19□□□□□ -0.14
HMGCLL1-205ENST00000398661 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
HMGCLL1-205ENST00000398661 ABCC5O15440 1437 aa14.18□□□□□ -0.14
HMGCLL1-205ENST00000398661 CDC42BPAQ5VT25 1732 aa14.17□□□□□ -0.14
HMGCLL1-205ENST00000398661 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
HMGCLL1-205ENST00000398661 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
HMGCLL1-205ENST00000398661 ARHGAP5Q13017 1502 aa14.17□□□□□ -0.14
HMGCLL1-205ENST00000398661 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
HMGCLL1-205ENST00000398661 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
HMGCLL1-205ENST00000398661 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
HMGCLL1-205ENST00000398661 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
HMGCLL1-205ENST00000398661 DAPK1P53355 1430 aa14.15□□□□□ -0.14
HMGCLL1-205ENST00000398661 MIA2Q96PC5 1412 aa14.15□□□□□ -0.14
HMGCLL1-205ENST00000398661 KDM6BO15054 1643 aa14.14□□□□□ -0.15
HMGCLL1-205ENST00000398661 CDC42BPBQ9Y5S2 1711 aa14.13□□□□□ -0.15
HMGCLL1-205ENST00000398661 NAIPQ13075 1403 aa14.13□□□□□ -0.15
HMGCLL1-205ENST00000398661 ARHGEF12Q9NZN5 1544 aa14.12□□□□□ -0.15
HMGCLL1-205ENST00000398661 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
HMGCLL1-205ENST00000398661 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
HMGCLL1-205ENST00000398661 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
HMGCLL1-205ENST00000398661 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
HMGCLL1-205ENST00000398661 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
HMGCLL1-205ENST00000398661 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
HMGCLL1-205ENST00000398661 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
HMGCLL1-205ENST00000398661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
HMGCLL1-205ENST00000398661 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
HMGCLL1-205ENST00000398661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.15
HMGCLL1-205ENST00000398661 PLCH2O75038 1416 aa14.08□□□□□ -0.16
HMGCLL1-205ENST00000398661 ANO8Q9HCE9 1232 aaPredicted RBP14.07□□□□□ -0.16
HMGCLL1-205ENST00000398661 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
HMGCLL1-205ENST00000398661 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
HMGCLL1-205ENST00000398661 CD109Q6YHK3 1445 aa14.07□□□□□ -0.16
HMGCLL1-205ENST00000398661 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
HMGCLL1-205ENST00000398661 FANCAO15360 1455 aa14.06□□□□□ -0.16
HMGCLL1-205ENST00000398661 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
HMGCLL1-205ENST00000398661 C9orf84Q5VXU9 1444 aa14.05□□□□□ -0.16
HMGCLL1-205ENST00000398661 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
HMGCLL1-205ENST00000398661 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
HMGCLL1-205ENST00000398661 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
HMGCLL1-205ENST00000398661 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
HMGCLL1-205ENST00000398661 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
HMGCLL1-205ENST00000398661 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
HMGCLL1-205ENST00000398661 AKNAQ7Z591 1439 aa14.03□□□□□ -0.16
HMGCLL1-205ENST00000398661 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
HMGCLL1-205ENST00000398661 TSPOAP1O95153 1857 aa14.02□□□□□ -0.16
HMGCLL1-205ENST00000398661 KIF15Q9NS87 1388 aa14.01□□□□□ -0.17
HMGCLL1-205ENST00000398661 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
HMGCLL1-205ENST00000398661 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
HMGCLL1-205ENST00000398661 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
HMGCLL1-205ENST00000398661 MPHOSPH9Q99550 1183 aa14□□□□□ -0.17
HMGCLL1-205ENST00000398661 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
HMGCLL1-205ENST00000398661 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
HMGCLL1-205ENST00000398661 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
HMGCLL1-205ENST00000398661 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
HMGCLL1-205ENST00000398661 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
HMGCLL1-205ENST00000398661 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
HMGCLL1-205ENST00000398661 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
HMGCLL1-205ENST00000398661 ABCA9Q8IUA7 1624 aa13.97□□□□□ -0.17
HMGCLL1-205ENST00000398661 ANP32CO43423 234 aa13.96□□□□□ -0.17
HMGCLL1-205ENST00000398661 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
HMGCLL1-205ENST00000398661 NUP155O75694 1391 aa13.95□□□□□ -0.18
HMGCLL1-205ENST00000398661 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
HMGCLL1-205ENST00000398661 PKD2Q13563 968 aa13.94□□□□□ -0.18
HMGCLL1-205ENST00000398661 ABCC1P33527 1531 aa13.94□□□□□ -0.18
HMGCLL1-205ENST00000398661 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
HMGCLL1-205ENST00000398661 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
HMGCLL1-205ENST00000398661 KIF3BO15066 747 aa13.93□□□□□ -0.18
HMGCLL1-205ENST00000398661 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
HMGCLL1-205ENST00000398661 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
HMGCLL1-205ENST00000398661 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
HMGCLL1-205ENST00000398661 GGT6Q6P531 493 aa13.91□□□□□ -0.18
HMGCLL1-205ENST00000398661 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
HMGCLL1-205ENST00000398661 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
HMGCLL1-205ENST00000398661 NBR1Q14596 966 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms