RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
PCDHGB7-201ENST00000398594 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
PCDHGB7-201ENST00000398594 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
PCDHGB7-201ENST00000398594 CCDC18Q5T9S5 1454 aa18.76■□□□□ 0.59
PCDHGB7-201ENST00000398594 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
PCDHGB7-201ENST00000398594 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
PCDHGB7-201ENST00000398594 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
PCDHGB7-201ENST00000398594 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
PCDHGB7-201ENST00000398594 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
PCDHGB7-201ENST00000398594 NPHP1O15259 732 aa18.72■□□□□ 0.59
PCDHGB7-201ENST00000398594 EID1Q9Y6B2 187 aa18.72■□□□□ 0.59
PCDHGB7-201ENST00000398594 IGF1RP08069 1367 aa18.71■□□□□ 0.59
PCDHGB7-201ENST00000398594 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
PCDHGB7-201ENST00000398594 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
PCDHGB7-201ENST00000398594 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
PCDHGB7-201ENST00000398594 NUTM2FA1L443 756 aa18.69■□□□□ 0.58
PCDHGB7-201ENST00000398594 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHGB7-201ENST00000398594 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
PCDHGB7-201ENST00000398594 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
PCDHGB7-201ENST00000398594 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
PCDHGB7-201ENST00000398594 ANP32BQ92688 251 aaKnown RBP18.64■□□□□ 0.57
PCDHGB7-201ENST00000398594 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
PCDHGB7-201ENST00000398594 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
PCDHGB7-201ENST00000398594 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCDHGB7-201ENST00000398594 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
PCDHGB7-201ENST00000398594 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
PCDHGB7-201ENST00000398594 RGS3P49796 1198 aa18.58■□□□□ 0.56
PCDHGB7-201ENST00000398594 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
PCDHGB7-201ENST00000398594 OS9Q13438 667 aaPredicted RBP18.57■□□□□ 0.56
PCDHGB7-201ENST00000398594 TERF2IPQ9NYB0 399 aa18.56■□□□□ 0.56
PCDHGB7-201ENST00000398594 NBR1Q14596 966 aa18.54■□□□□ 0.56
PCDHGB7-201ENST00000398594 NESP48681 1621 aa18.54■□□□□ 0.56
PCDHGB7-201ENST00000398594 CCDC9Q9Y3X0 531 aaKnown RBP18.54■□□□□ 0.56
PCDHGB7-201ENST00000398594 ZNF644Q9H582 1327 aaPredicted RBP18.54■□□□□ 0.56
PCDHGB7-201ENST00000398594 MS4A1P11836 297 aa18.52■□□□□ 0.56
PCDHGB7-201ENST00000398594 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
PCDHGB7-201ENST00000398594 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
PCDHGB7-201ENST00000398594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHGB7-201ENST00000398594 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
PCDHGB7-201ENST00000398594 CHMP4BQ9H444 224 aaKnown RBP18.5■□□□□ 0.55
PCDHGB7-201ENST00000398594 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
PCDHGB7-201ENST00000398594 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
PCDHGB7-201ENST00000398594 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
PCDHGB7-201ENST00000398594 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
PCDHGB7-201ENST00000398594 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
PCDHGB7-201ENST00000398594 BECN1Q14457 450 aa18.47■□□□□ 0.55
PCDHGB7-201ENST00000398594 RALBP1Q15311 655 aa18.46■□□□□ 0.55
PCDHGB7-201ENST00000398594 AMPHP49418 695 aa18.45■□□□□ 0.54
PCDHGB7-201ENST00000398594 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
PCDHGB7-201ENST00000398594 B4GALNT3Q6L9W6 998 aa18.45■□□□□ 0.54
PCDHGB7-201ENST00000398594 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
PCDHGB7-201ENST00000398594 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
PCDHGB7-201ENST00000398594 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
PCDHGB7-201ENST00000398594 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
PCDHGB7-201ENST00000398594 CFTRP13569 1480 aa18.42■□□□□ 0.54
PCDHGB7-201ENST00000398594 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
PCDHGB7-201ENST00000398594 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
PCDHGB7-201ENST00000398594 APBB1O00213 710 aa18.4■□□□□ 0.54
PCDHGB7-201ENST00000398594 KCNJ4P48050 445 aa18.4■□□□□ 0.54
PCDHGB7-201ENST00000398594 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
PCDHGB7-201ENST00000398594 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
PCDHGB7-201ENST00000398594 FGD1P98174 961 aa18.38■□□□□ 0.53
PCDHGB7-201ENST00000398594 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
PCDHGB7-201ENST00000398594 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
PCDHGB7-201ENST00000398594 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
PCDHGB7-201ENST00000398594 PANK3Q9H999 370 aa18.36■□□□□ 0.53
PCDHGB7-201ENST00000398594 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
PCDHGB7-201ENST00000398594 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
PCDHGB7-201ENST00000398594 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
PCDHGB7-201ENST00000398594 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
PCDHGB7-201ENST00000398594 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
PCDHGB7-201ENST00000398594 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
PCDHGB7-201ENST00000398594 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
PCDHGB7-201ENST00000398594 NAP1L2Q9ULW6 460 aaPredicted RBP18.32■□□□□ 0.52
PCDHGB7-201ENST00000398594 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
PCDHGB7-201ENST00000398594 FGD6Q6ZV73 1430 aa18.31■□□□□ 0.52
PCDHGB7-201ENST00000398594 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
PCDHGB7-201ENST00000398594 PHLDB1Q86UU1 1377 aa18.3■□□□□ 0.52
PCDHGB7-201ENST00000398594 COG3Q96JB2 828 aa18.3■□□□□ 0.52
PCDHGB7-201ENST00000398594 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
PCDHGB7-201ENST00000398594 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
PCDHGB7-201ENST00000398594 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
PCDHGB7-201ENST00000398594 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
PCDHGB7-201ENST00000398594 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
PCDHGB7-201ENST00000398594 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
PCDHGB7-201ENST00000398594 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
PCDHGB7-201ENST00000398594 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
PCDHGB7-201ENST00000398594 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
PCDHGB7-201ENST00000398594 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
PCDHGB7-201ENST00000398594 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
PCDHGB7-201ENST00000398594 USP47Q96K76 1375 aa18.25■□□□□ 0.51
PCDHGB7-201ENST00000398594 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
PCDHGB7-201ENST00000398594 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
PCDHGB7-201ENST00000398594 TULP1O00294 542 aaPredicted RBP18.24■□□□□ 0.51
PCDHGB7-201ENST00000398594 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms