RNA–Protein interactions for RNA: ENST00000398229.7

PDE9A-210, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-210ENST00000398229 TAF3Q5VWG9 929 aa14.52□□□□□ -0.08
PDE9A-210ENST00000398229 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
PDE9A-210ENST00000398229 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
PDE9A-210ENST00000398229 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
PDE9A-210ENST00000398229 KIF20AO95235 890 aa14.5□□□□□ -0.09
PDE9A-210ENST00000398229 FRAT2O75474 233 aaPredicted RBP14.49□□□□□ -0.09
PDE9A-210ENST00000398229 CCNB3Q8WWL7 1395 aa14.49□□□□□ -0.09
PDE9A-210ENST00000398229 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
PDE9A-210ENST00000398229 TNNT2P45379 298 aaPredicted RBP14.49□□□□□ -0.09
PDE9A-210ENST00000398229 DMTNQ08495 405 aa14.49□□□□□ -0.09
PDE9A-210ENST00000398229 TEX2Q8IWB9 1127 aa14.49□□□□□ -0.09
PDE9A-210ENST00000398229 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
PDE9A-210ENST00000398229 CHMP4BQ9H444 224 aaKnown RBP14.49□□□□□ -0.09
PDE9A-210ENST00000398229 ESPNB1AK53 854 aa14.48□□□□□ -0.09
PDE9A-210ENST00000398229 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
PDE9A-210ENST00000398229 CNTLNQ9NXG0 1405 aa14.47□□□□□ -0.09
PDE9A-210ENST00000398229 RUSC2Q8N2Y8 1516 aa14.47□□□□□ -0.09
PDE9A-210ENST00000398229 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.09
PDE9A-210ENST00000398229 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
PDE9A-210ENST00000398229 PAXIP1Q6ZW49 1069 aaPredicted RBP14.46□□□□□ -0.1
PDE9A-210ENST00000398229 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
PDE9A-210ENST00000398229 MRE11P49959 708 aa14.44□□□□□ -0.1
PDE9A-210ENST00000398229 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
PDE9A-210ENST00000398229 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
PDE9A-210ENST00000398229 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
PDE9A-210ENST00000398229 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
PDE9A-210ENST00000398229 XRCC6P12956 609 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDE9A-210ENST00000398229 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
PDE9A-210ENST00000398229 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
PDE9A-210ENST00000398229 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.41□□□□□ -0.1
PDE9A-210ENST00000398229 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
PDE9A-210ENST00000398229 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
PDE9A-210ENST00000398229 TMEM51Q9NW97 253 aa14.39□□□□□ -0.11
PDE9A-210ENST00000398229 POGKQ9P215 609 aa14.39□□□□□ -0.11
PDE9A-210ENST00000398229 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDE9A-210ENST00000398229 PPP4R3BQ5MIZ7 849 aa14.38□□□□□ -0.11
PDE9A-210ENST00000398229 CFTRP13569 1480 aa14.38□□□□□ -0.11
PDE9A-210ENST00000398229 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
PDE9A-210ENST00000398229 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
PDE9A-210ENST00000398229 OFD1O75665 1012 aa14.36□□□□□ -0.11
PDE9A-210ENST00000398229 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
PDE9A-210ENST00000398229 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
PDE9A-210ENST00000398229 MYH16Q9H6N6 1097 aa14.36□□□□□ -0.11
PDE9A-210ENST00000398229 PRKRIP1Q9H875 184 aaPredicted RBP14.35□□□□□ -0.11
PDE9A-210ENST00000398229 SLC20A2Q08357 652 aa14.34□□□□□ -0.11
PDE9A-210ENST00000398229 HOMEZQ8IX15 550 aa14.34□□□□□ -0.11
PDE9A-210ENST00000398229 MAP3K1Q13233 1512 aa14.34□□□□□ -0.11
PDE9A-210ENST00000398229 DYNC1I1O14576 645 aa14.33□□□□□ -0.12
PDE9A-210ENST00000398229 RIPK4P57078 832 aa14.33□□□□□ -0.12
PDE9A-210ENST00000398229 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
PDE9A-210ENST00000398229 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
PDE9A-210ENST00000398229 FAM161AQ3B820 660 aa14.31□□□□□ -0.12
PDE9A-210ENST00000398229 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
PDE9A-210ENST00000398229 ZSCAN20P17040 1043 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-210ENST00000398229 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-210ENST00000398229 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-210ENST00000398229 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
PDE9A-210ENST00000398229 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
PDE9A-210ENST00000398229 BECN1Q14457 450 aa14.3□□□□□ -0.12
PDE9A-210ENST00000398229 CUX1P39880 1505 aa14.29□□□□□ -0.12
PDE9A-210ENST00000398229 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
PDE9A-210ENST00000398229 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
PDE9A-210ENST00000398229 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.12
PDE9A-210ENST00000398229 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
PDE9A-210ENST00000398229 ERBB4Q15303 1308 aa14.27□□□□□ -0.13
PDE9A-210ENST00000398229 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.13
PDE9A-210ENST00000398229 ARAP1Q96P48 1450 aa14.27□□□□□ -0.13
PDE9A-210ENST00000398229 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
PDE9A-210ENST00000398229 HS1BP3Q53T59 392 aa14.26□□□□□ -0.13
PDE9A-210ENST00000398229 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
PDE9A-210ENST00000398229 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
PDE9A-210ENST00000398229 NCOA1Q15788 1441 aa14.25□□□□□ -0.13
PDE9A-210ENST00000398229 ZSCAN30Q86W11 494 aa14.25□□□□□ -0.13
PDE9A-210ENST00000398229 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
PDE9A-210ENST00000398229 CDK11BP21127 795 aaKnown RBP14.24□□□□□ -0.13
PDE9A-210ENST00000398229 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
PDE9A-210ENST00000398229 KDM5BQ9UGL1 1544 aa14.23□□□□□ -0.13
PDE9A-210ENST00000398229 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
PDE9A-210ENST00000398229 CCDC173Q0VFZ6 552 aa14.23□□□□□ -0.13
PDE9A-210ENST00000398229 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
PDE9A-210ENST00000398229 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
PDE9A-210ENST00000398229 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
PDE9A-210ENST00000398229 CCDC184Q52MB2 194 aa14.22□□□□□ -0.13
PDE9A-210ENST00000398229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDE9A-210ENST00000398229 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
PDE9A-210ENST00000398229 PPP1R9BQ96SB3 815 aa14.21□□□□□ -0.13
PDE9A-210ENST00000398229 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
PDE9A-210ENST00000398229 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 C8orf34Q49A92 452 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 RGS22Q8NE09 1264 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
PDE9A-210ENST00000398229 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
PDE9A-210ENST00000398229 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
PDE9A-210ENST00000398229 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
PDE9A-210ENST00000398229 PTMSP20962 102 aa14.19□□□□□ -0.14
PDE9A-210ENST00000398229 MMP14P50281 582 aa14.19□□□□□ -0.14
PDE9A-210ENST00000398229 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
PDE9A-210ENST00000398229 ZNF500O60304 480 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms