RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
CSGALNACT1-202ENST00000397998 NBPF8Q3BBV2 869 aa14.61□□□□□ -0.07
CSGALNACT1-202ENST00000397998 PLEKHD1A6NEE1 506 aa14.61□□□□□ -0.07
CSGALNACT1-202ENST00000397998 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
CSGALNACT1-202ENST00000397998 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
CSGALNACT1-202ENST00000397998 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
CSGALNACT1-202ENST00000397998 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
CSGALNACT1-202ENST00000397998 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.07
CSGALNACT1-202ENST00000397998 PDE4AP27815 886 aa14.58□□□□□ -0.07
CSGALNACT1-202ENST00000397998 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.07
CSGALNACT1-202ENST00000397998 PLIN1O60240 522 aa14.58□□□□□ -0.08
CSGALNACT1-202ENST00000397998 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
CSGALNACT1-202ENST00000397998 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
CSGALNACT1-202ENST00000397998 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 USP47Q96K76 1375 aa14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 NAIPQ13075 1403 aa14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 RALBP1Q15311 655 aa14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
CSGALNACT1-202ENST00000397998 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
CSGALNACT1-202ENST00000397998 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
CSGALNACT1-202ENST00000397998 NUP155O75694 1391 aa14.55□□□□□ -0.08
CSGALNACT1-202ENST00000397998 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
CSGALNACT1-202ENST00000397998 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
CSGALNACT1-202ENST00000397998 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
CSGALNACT1-202ENST00000397998 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
CSGALNACT1-202ENST00000397998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
CSGALNACT1-202ENST00000397998 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
CSGALNACT1-202ENST00000397998 MAP3K1Q13233 1512 aa14.52□□□□□ -0.08
CSGALNACT1-202ENST00000397998 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.09
CSGALNACT1-202ENST00000397998 ROCK2O75116 1388 aaKnown RBP14.51□□□□□ -0.09
CSGALNACT1-202ENST00000397998 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
CSGALNACT1-202ENST00000397998 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
CSGALNACT1-202ENST00000397998 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
CSGALNACT1-202ENST00000397998 CHGAP10645 457 aaKnown RBP14.49□□□□□ -0.09
CSGALNACT1-202ENST00000397998 TMF1P82094 1093 aa14.48□□□□□ -0.09
CSGALNACT1-202ENST00000397998 PDE3BQ13370 1112 aa14.48□□□□□ -0.09
CSGALNACT1-202ENST00000397998 PTPRKQ15262 1439 aa14.48□□□□□ -0.09
CSGALNACT1-202ENST00000397998 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
CSGALNACT1-202ENST00000397998 BECN1Q14457 450 aa14.47□□□□□ -0.09
CSGALNACT1-202ENST00000397998 ANKRD30AQ9BXX3 1397 aa14.46□□□□□ -0.09
CSGALNACT1-202ENST00000397998 PNISRQ8TF01 805 aaKnown RBP14.46□□□□□ -0.09
CSGALNACT1-202ENST00000397998 FRAT1Q92837 279 aaPredicted RBP14.46□□□□□ -0.09
CSGALNACT1-202ENST00000397998 IL27Q8NEV9 243 aa14.45□□□□□ -0.1
CSGALNACT1-202ENST00000397998 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
CSGALNACT1-202ENST00000397998 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
CSGALNACT1-202ENST00000397998 SMG6Q86US8 1419 aaKnown RBP14.44□□□□□ -0.1
CSGALNACT1-202ENST00000397998 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
CSGALNACT1-202ENST00000397998 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.1
CSGALNACT1-202ENST00000397998 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
CSGALNACT1-202ENST00000397998 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
CSGALNACT1-202ENST00000397998 HSP90AA1P07900 732 aaKnown RBP14.42□□□□□ -0.1
CSGALNACT1-202ENST00000397998 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
CSGALNACT1-202ENST00000397998 PANK3Q9H999 370 aa14.41□□□□□ -0.1
CSGALNACT1-202ENST00000397998 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
CSGALNACT1-202ENST00000397998 MS4A1P11836 297 aa14.41□□□□□ -0.1
CSGALNACT1-202ENST00000397998 TNNT2P45379 298 aaPredicted RBP14.41□□□□□ -0.1
CSGALNACT1-202ENST00000397998 SLKQ9H2G2 1235 aaPredicted RBP14.41□□□□□ -0.1
CSGALNACT1-202ENST00000397998 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
CSGALNACT1-202ENST00000397998 GSE1Q14687 1217 aa14.4□□□□□ -0.1
CSGALNACT1-202ENST00000397998 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
CSGALNACT1-202ENST00000397998 CCDC146Q8IYE0 955 aa14.39□□□□□ -0.11
CSGALNACT1-202ENST00000397998 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
CSGALNACT1-202ENST00000397998 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
CSGALNACT1-202ENST00000397998 PTPN23Q9H3S7 1636 aa14.38□□□□□ -0.11
CSGALNACT1-202ENST00000397998 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
CSGALNACT1-202ENST00000397998 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
CSGALNACT1-202ENST00000397998 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
CSGALNACT1-202ENST00000397998 BACH2Q9BYV9 841 aa14.37□□□□□ -0.11
CSGALNACT1-202ENST00000397998 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
CSGALNACT1-202ENST00000397998 ANKRD30BQ9BXX2 1392 aa14.36□□□□□ -0.11
CSGALNACT1-202ENST00000397998 ARID4BQ4LE39 1312 aaPredicted RBP14.36□□□□□ -0.11
CSGALNACT1-202ENST00000397998 BRD4O60885 1362 aaPredicted RBP14.35□□□□□ -0.11
CSGALNACT1-202ENST00000397998 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
CSGALNACT1-202ENST00000397998 NFKBIBQ15653 356 aa14.35□□□□□ -0.11
CSGALNACT1-202ENST00000397998 FAM161AQ3B820 660 aa14.35□□□□□ -0.11
CSGALNACT1-202ENST00000397998 NESP48681 1621 aa14.35□□□□□ -0.11
CSGALNACT1-202ENST00000397998 CENPQQ7L2Z9 268 aaPredicted RBP14.34□□□□□ -0.11
CSGALNACT1-202ENST00000397998 TOPBP1Q92547 1522 aa14.33□□□□□ -0.11
CSGALNACT1-202ENST00000397998 BRPF3Q9ULD4 1205 aa14.33□□□□□ -0.12
CSGALNACT1-202ENST00000397998 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
CSGALNACT1-202ENST00000397998 SUPT6HQ7KZ85 1726 aaKnown RBP14.31□□□□□ -0.12
CSGALNACT1-202ENST00000397998 FTSJ3Q8IY81 847 aaKnown RBP14.31□□□□□ -0.12
CSGALNACT1-202ENST00000397998 GZF1Q9H116 711 aaPredicted RBP14.3□□□□□ -0.12
CSGALNACT1-202ENST00000397998 NBPF1Q3BBV0 1214 aa14.3□□□□□ -0.12
CSGALNACT1-202ENST00000397998 NAP1L5Q96NT1 182 aaPredicted RBP14.3□□□□□ -0.12
CSGALNACT1-202ENST00000397998 ADAMTS8Q9UP79 889 aa14.3□□□□□ -0.12
CSGALNACT1-202ENST00000397998 ANKRD50Q9ULJ7 1429 aa14.3□□□□□ -0.12
CSGALNACT1-202ENST00000397998 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
CSGALNACT1-202ENST00000397998 DAPK1P53355 1430 aa14.29□□□□□ -0.12
CSGALNACT1-202ENST00000397998 ANP32BQ92688 251 aaKnown RBP14.29□□□□□ -0.12
CSGALNACT1-202ENST00000397998 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
CSGALNACT1-202ENST00000397998 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
CSGALNACT1-202ENST00000397998 GLIPR1L2Q4G1C9 344 aa14.28□□□□□ -0.12
CSGALNACT1-202ENST00000397998 APAF1O14727 1248 aa14.27□□□□□ -0.12
CSGALNACT1-202ENST00000397998 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.12
CSGALNACT1-202ENST00000397998 KIAA1107Q9UPP5 1409 aa14.27□□□□□ -0.13
CSGALNACT1-202ENST00000397998 RPRD2Q5VT52 1461 aaKnown RBP14.27□□□□□ -0.13
CSGALNACT1-202ENST00000397998 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
CSGALNACT1-202ENST00000397998 TRIM44Q96DX7 344 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms