RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ADGRL2O95490 1459 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 IQGAP2Q13576 1575 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
PTPRD-205ENST00000397611 SPATA31E1Q6ZUB1 1445 aa7.4□□□□□ -1.22
PTPRD-205ENST00000397611 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.22
PTPRD-205ENST00000397611 STAC3Q96MF2 364 aa7.4□□□□□ -1.23
PTPRD-205ENST00000397611 MPHOSPH9Q99550 1183 aa7.4□□□□□ -1.23
PTPRD-205ENST00000397611 CCDC7Q96M83 1385 aa7.4□□□□□ -1.23
PTPRD-205ENST00000397611 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
PTPRD-205ENST00000397611 CARMIL2Q6F5E8 1435 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 ARHGEF12Q9NZN5 1544 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 MRC2Q9UBG0 1479 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 SHANK2Q9UPX8 1470 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 PPP4R2Q9NY27 417 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 CTTNBP2Q8WZ74 1663 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 ZMYM4Q5VZL5 1548 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 ZBTB47Q9UFB7 747 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-205ENST00000397611 ANKRD30AQ9BXX3 1397 aa7.38□□□□□ -1.23
PTPRD-205ENST00000397611 TEX14Q8IWB6 1497 aa7.37□□□□□ -1.23
PTPRD-205ENST00000397611 MAGI1Q96QZ7 1491 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-205ENST00000397611 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
PTPRD-205ENST00000397611 UHRF1BP1Q6BDS2 1440 aa7.37□□□□□ -1.23
PTPRD-205ENST00000397611 WDR62O43379 1518 aa7.37□□□□□ -1.23
PTPRD-205ENST00000397611 DAPK1P53355 1430 aa7.36□□□□□ -1.23
PTPRD-205ENST00000397611 TARBP1Q13395 1621 aaKnown RBP7.36□□□□□ -1.23
PTPRD-205ENST00000397611 HSPA5P11021 654 aaKnown RBP7.36□□□□□ -1.23
PTPRD-205ENST00000397611 NESP48681 1621 aa7.36□□□□□ -1.23
PTPRD-205ENST00000397611 RNF123Q5XPI4 1314 aa7.36□□□□□ -1.23
PTPRD-205ENST00000397611 ADAMTS12P58397 1594 aa7.35□□□□□ -1.23
PTPRD-205ENST00000397611 KIAA1107Q9UPP5 1409 aa7.35□□□□□ -1.23
PTPRD-205ENST00000397611 ABCC5O15440 1437 aa7.35□□□□□ -1.23
PTPRD-205ENST00000397611 GCC2Q8IWJ2 1684 aa7.35□□□□□ -1.23
PTPRD-205ENST00000397611 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
PTPRD-205ENST00000397611 DEKP35659 375 aaKnown RBP7.34□□□□□ -1.23
PTPRD-205ENST00000397611 PDE3BQ13370 1112 aa7.34□□□□□ -1.23
PTPRD-205ENST00000397611 DENND4BO75064 1496 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-205ENST00000397611 NUP153P49790 1475 aaKnown RBP7.33□□□□□ -1.24
PTPRD-205ENST00000397611 SLC4A1APQ9BWU0 796 aaKnown RBP7.33□□□□□ -1.24
PTPRD-205ENST00000397611 CFDP1Q9UEE9 299 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-205ENST00000397611 PTPRGP23470 1445 aa7.33□□□□□ -1.24
PTPRD-205ENST00000397611 NUP160Q12769 1436 aa7.33□□□□□ -1.24
PTPRD-205ENST00000397611 RBM19Q9Y4C8 960 aaKnown RBP7.33□□□□□ -1.24
PTPRD-205ENST00000397611 ARXQ96QS3 562 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 ANKRD50Q9ULJ7 1429 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 GPRASP1Q5JY77 1395 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 GRIN2AQ12879 1464 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 DISP1Q96F81 1524 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
PTPRD-205ENST00000397611 MAGI3Q5TCQ9 1506 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 NGEFQ8N5V2 710 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 SMG6Q86US8 1419 aaKnown RBP7.31□□□□□ -1.24
PTPRD-205ENST00000397611 DNMT1P26358 1616 aaKnown RBP7.31□□□□□ -1.24
PTPRD-205ENST00000397611 MBD5Q9P267 1494 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 RALBP1Q15311 655 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 TSPY4P0CV99 314 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 TSPY10P0CW01 314 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 KIF7Q2M1P5 1343 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 RRP7BPQ9NSQ0 103 aa7.31□□□□□ -1.24
PTPRD-205ENST00000397611 PLEKHD1A6NEE1 506 aa7.3□□□□□ -1.24
PTPRD-205ENST00000397611 BRD4O60885 1362 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-205ENST00000397611 GPATCH8Q9UKJ3 1502 aaKnown RBP7.3□□□□□ -1.24
PTPRD-205ENST00000397611 KDM5DQ9BY66 1539 aa7.3□□□□□ -1.24
PTPRD-205ENST00000397611 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
PTPRD-205ENST00000397611 RALGAPBQ86X10 1494 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 SYNJ2O15056 1496 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 KCNH8Q96L42 1107 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 ATP10AO60312 1499 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 PLEKHH2Q8IVE3 1493 aa7.29□□□□□ -1.24
PTPRD-205ENST00000397611 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
PTPRD-205ENST00000397611 PZPP20742 1482 aa7.28□□□□□ -1.24
PTPRD-205ENST00000397611 KIAA0556O60303 1618 aa7.28□□□□□ -1.24
PTPRD-205ENST00000397611 LRPPRCP42704 1394 aaKnown RBP7.28□□□□□ -1.24
PTPRD-205ENST00000397611 ZNF326Q5BKZ1 582 aaKnown RBP7.28□□□□□ -1.24
PTPRD-205ENST00000397611 ERCC6Q03468 1493 aa7.28□□□□□ -1.24
PTPRD-205ENST00000397611 NUDCQ9Y266 331 aa7.28□□□□□ -1.24
PTPRD-205ENST00000397611 NOP58Q9Y2X3 529 aaKnown RBP7.28□□□□□ -1.24
PTPRD-205ENST00000397611 USP47Q96K76 1375 aa7.28□□□□□ -1.24
PTPRD-205ENST00000397611 NLRP13Q86W25 1043 aa7.27□□□□□ -1.24
PTPRD-205ENST00000397611 DHX29Q7Z478 1369 aaKnown RBP7.27□□□□□ -1.24
PTPRD-205ENST00000397611 NEFMP07197 916 aa7.27□□□□□ -1.25
PTPRD-205ENST00000397611 NBPF8Q3BBV2 869 aa7.27□□□□□ -1.25
PTPRD-205ENST00000397611 LAS1LQ9Y4W2 734 aaKnown RBP7.27□□□□□ -1.25
PTPRD-205ENST00000397611 KIF15Q9NS87 1388 aa7.26□□□□□ -1.25
PTPRD-205ENST00000397611 HIRIP3Q9BW71 556 aaPredicted RBP7.26□□□□□ -1.25
PTPRD-205ENST00000397611 PNISRQ8TF01 805 aaKnown RBP7.26□□□□□ -1.25
PTPRD-205ENST00000397611 CHIC2Q9UKJ5 165 aa7.25□□□□□ -1.25
PTPRD-205ENST00000397611 JPH4Q96JJ6 628 aa7.25□□□□□ -1.25
PTPRD-205ENST00000397611 ABCC10Q5T3U5 1492 aa7.25□□□□□ -1.25
PTPRD-205ENST00000397611 MS4A1P11836 297 aa7.25□□□□□ -1.25
PTPRD-205ENST00000397611 CAMSAP2Q08AD1 1489 aa7.24□□□□□ -1.25
PTPRD-205ENST00000397611 CDK13Q14004 1512 aaKnown RBP7.24□□□□□ -1.25
PTPRD-205ENST00000397611 NPC1L1Q9UHC9 1359 aa7.24□□□□□ -1.25
PTPRD-205ENST00000397611 PKD2Q13563 968 aa7.24□□□□□ -1.25
PTPRD-205ENST00000397611 NUP155O75694 1391 aa7.24□□□□□ -1.25
PTPRD-205ENST00000397611 ARHGEF5Q12774 1597 aa7.24□□□□□ -1.25
PTPRD-205ENST00000397611 RAPGEF6Q8TEU7 1601 aa7.23□□□□□ -1.25
PTPRD-205ENST00000397611 MYBBP1AQ9BQG0 1328 aaKnown RBP7.23□□□□□ -1.25
PTPRD-205ENST00000397611 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms