RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
ATP2A3-205ENST00000397041 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.86
ATP2A3-205ENST00000397041 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
ATP2A3-205ENST00000397041 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
ATP2A3-205ENST00000397041 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
ATP2A3-205ENST00000397041 PDE4AP27815 886 aa20.38■□□□□ 0.85
ATP2A3-205ENST00000397041 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
ATP2A3-205ENST00000397041 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
ATP2A3-205ENST00000397041 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
ATP2A3-205ENST00000397041 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
ATP2A3-205ENST00000397041 TPRNQ4KMQ1 711 aa20.36■□□□□ 0.85
ATP2A3-205ENST00000397041 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
ATP2A3-205ENST00000397041 WASHC2AQ641Q2 1341 aa20.34■□□□□ 0.85
ATP2A3-205ENST00000397041 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
ATP2A3-205ENST00000397041 MAPK8IP3Q9UPT6 1336 aa20.32■□□□□ 0.84
ATP2A3-205ENST00000397041 IGF1RP08069 1367 aa20.32■□□□□ 0.84
ATP2A3-205ENST00000397041 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
ATP2A3-205ENST00000397041 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
ATP2A3-205ENST00000397041 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
ATP2A3-205ENST00000397041 HSP90AB1P08238 724 aaKnown RBP20.3■□□□□ 0.84
ATP2A3-205ENST00000397041 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
ATP2A3-205ENST00000397041 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
ATP2A3-205ENST00000397041 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
ATP2A3-205ENST00000397041 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
ATP2A3-205ENST00000397041 MORC1Q86VD1 984 aa20.27■□□□□ 0.84
ATP2A3-205ENST00000397041 GOLGA2Q08379 1002 aa20.27■□□□□ 0.83
ATP2A3-205ENST00000397041 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
ATP2A3-205ENST00000397041 RRBP1Q9P2E9 1410 aaKnown RBP20.26■□□□□ 0.83
ATP2A3-205ENST00000397041 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
ATP2A3-205ENST00000397041 CLUAP1Q96AJ1 413 aa20.26■□□□□ 0.83
ATP2A3-205ENST00000397041 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
ATP2A3-205ENST00000397041 CCDC7Q96M83 1385 aa20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 HNRNPMP52272 730 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 USP47Q96K76 1375 aa20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 HSCBQ8IWL3 235 aa20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 ANKRD30AQ9BXX3 1397 aa20.25■□□□□ 0.83
ATP2A3-205ENST00000397041 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
ATP2A3-205ENST00000397041 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
ATP2A3-205ENST00000397041 L1TD1Q5T7N2 865 aaKnown RBP20.23■□□□□ 0.83
ATP2A3-205ENST00000397041 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
ATP2A3-205ENST00000397041 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
ATP2A3-205ENST00000397041 PANK3Q9H999 370 aa20.22■□□□□ 0.83
ATP2A3-205ENST00000397041 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
ATP2A3-205ENST00000397041 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
ATP2A3-205ENST00000397041 PLEKHG5O94827 1062 aa20.2■□□□□ 0.82
ATP2A3-205ENST00000397041 UACAQ9BZF9 1416 aa20.19■□□□□ 0.82
ATP2A3-205ENST00000397041 USP35Q9P2H5 1018 aa20.19■□□□□ 0.82
ATP2A3-205ENST00000397041 DNTTIP2Q5QJE6 756 aaKnown RBP20.18■□□□□ 0.82
ATP2A3-205ENST00000397041 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
ATP2A3-205ENST00000397041 GSE1Q14687 1217 aa20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 CNTLNQ9NXG0 1405 aa20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 MSH5O43196 834 aa20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 MS4A1P11836 297 aa20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
ATP2A3-205ENST00000397041 POGKQ9P215 609 aa20.16■□□□□ 0.82
ATP2A3-205ENST00000397041 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
ATP2A3-205ENST00000397041 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
ATP2A3-205ENST00000397041 PLCB2Q00722 1185 aa20.14■□□□□ 0.81
ATP2A3-205ENST00000397041 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
ATP2A3-205ENST00000397041 RWDD1Q9H446 243 aaPredicted RBP20.13■□□□□ 0.81
ATP2A3-205ENST00000397041 RRP7AQ9Y3A4 280 aaKnown RBP20.13■□□□□ 0.81
ATP2A3-205ENST00000397041 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
ATP2A3-205ENST00000397041 CASC1Q6TDU7 716 aa20.12■□□□□ 0.81
ATP2A3-205ENST00000397041 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
ATP2A3-205ENST00000397041 CENPQQ7L2Z9 268 aaPredicted RBP20.12■□□□□ 0.81
ATP2A3-205ENST00000397041 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
ATP2A3-205ENST00000397041 APBB1O00213 710 aa20.11■□□□□ 0.81
ATP2A3-205ENST00000397041 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
ATP2A3-205ENST00000397041 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
ATP2A3-205ENST00000397041 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
ATP2A3-205ENST00000397041 CDCA7LQ96GN5 454 aa20.09■□□□□ 0.81
ATP2A3-205ENST00000397041 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.81
ATP2A3-205ENST00000397041 NBPF8Q3BBV2 869 aa20.08■□□□□ 0.81
ATP2A3-205ENST00000397041 MYOM3Q5VTT5 1437 aa20.08■□□□□ 0.8
ATP2A3-205ENST00000397041 STK26Q9P289 416 aa20.08■□□□□ 0.8
ATP2A3-205ENST00000397041 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
ATP2A3-205ENST00000397041 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
ATP2A3-205ENST00000397041 COG6Q9Y2V7 657 aa20.07■□□□□ 0.8
ATP2A3-205ENST00000397041 APAF1O14727 1248 aa20.06■□□□□ 0.8
ATP2A3-205ENST00000397041 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
ATP2A3-205ENST00000397041 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
ATP2A3-205ENST00000397041 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
ATP2A3-205ENST00000397041 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
ATP2A3-205ENST00000397041 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
ATP2A3-205ENST00000397041 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
ATP2A3-205ENST00000397041 GGT6Q6P531 493 aa20.03■□□□□ 0.8
ATP2A3-205ENST00000397041 MSNP26038 577 aaKnown RBP20.03■□□□□ 0.8
ATP2A3-205ENST00000397041 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
ATP2A3-205ENST00000397041 SOX12O15370 315 aa20.02■□□□□ 0.79
ATP2A3-205ENST00000397041 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
ATP2A3-205ENST00000397041 CHMP4BQ9H444 224 aaKnown RBP20.01■□□□□ 0.79
ATP2A3-205ENST00000397041 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
ATP2A3-205ENST00000397041 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
ATP2A3-205ENST00000397041 ARID3AQ99856 593 aa20■□□□□ 0.79
ATP2A3-205ENST00000397041 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
ATP2A3-205ENST00000397041 CARMIL2Q6F5E8 1435 aa20■□□□□ 0.79
ATP2A3-205ENST00000397041 GBP4Q96PP9 640 aa20■□□□□ 0.79
ATP2A3-205ENST00000397041 KANK1Q14678 1352 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms