RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
TRIM40-207ENST00000396581 BCANQ96GW7 911 aa18.71■□□□□ 0.59
TRIM40-207ENST00000396581 NEFLP07196 543 aa18.7■□□□□ 0.58
TRIM40-207ENST00000396581 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
TRIM40-207ENST00000396581 NAIPQ13075 1403 aa18.7■□□□□ 0.58
TRIM40-207ENST00000396581 ATP10BO94823 1461 aa18.69■□□□□ 0.58
TRIM40-207ENST00000396581 ERCC6L2Q5T890 1561 aa18.69■□□□□ 0.58
TRIM40-207ENST00000396581 MIA2Q96PC5 1412 aa18.68■□□□□ 0.58
TRIM40-207ENST00000396581 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
TRIM40-207ENST00000396581 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
TRIM40-207ENST00000396581 TCOF1Q13428 1488 aaKnown RBP18.64■□□□□ 0.58
TRIM40-207ENST00000396581 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
TRIM40-207ENST00000396581 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
TRIM40-207ENST00000396581 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
TRIM40-207ENST00000396581 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
TRIM40-207ENST00000396581 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
TRIM40-207ENST00000396581 AKNAQ7Z591 1439 aa18.59■□□□□ 0.57
TRIM40-207ENST00000396581 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.56
TRIM40-207ENST00000396581 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
TRIM40-207ENST00000396581 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
TRIM40-207ENST00000396581 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
TRIM40-207ENST00000396581 KIF14Q15058 1648 aa18.55■□□□□ 0.56
TRIM40-207ENST00000396581 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
TRIM40-207ENST00000396581 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.56
TRIM40-207ENST00000396581 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
TRIM40-207ENST00000396581 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
TRIM40-207ENST00000396581 ZNF644Q9H582 1327 aaPredicted RBP18.49■□□□□ 0.55
TRIM40-207ENST00000396581 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
TRIM40-207ENST00000396581 HSPA5P11021 654 aaKnown RBP18.47■□□□□ 0.55
TRIM40-207ENST00000396581 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
TRIM40-207ENST00000396581 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
TRIM40-207ENST00000396581 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRIM40-207ENST00000396581 ABCC5O15440 1437 aa18.45■□□□□ 0.54
TRIM40-207ENST00000396581 DAPK1P53355 1430 aa18.45■□□□□ 0.54
TRIM40-207ENST00000396581 CAMSAP2Q08AD1 1489 aa18.44■□□□□ 0.54
TRIM40-207ENST00000396581 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
TRIM40-207ENST00000396581 ROCK1Q13464 1354 aa18.43■□□□□ 0.54
TRIM40-207ENST00000396581 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
TRIM40-207ENST00000396581 NCOA1Q15788 1441 aa18.43■□□□□ 0.54
TRIM40-207ENST00000396581 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
TRIM40-207ENST00000396581 KDM6BO15054 1643 aa18.43■□□□□ 0.54
TRIM40-207ENST00000396581 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM40-207ENST00000396581 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
TRIM40-207ENST00000396581 MSH5O43196 834 aa18.4■□□□□ 0.54
TRIM40-207ENST00000396581 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
TRIM40-207ENST00000396581 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
TRIM40-207ENST00000396581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRIM40-207ENST00000396581 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
TRIM40-207ENST00000396581 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
TRIM40-207ENST00000396581 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
TRIM40-207ENST00000396581 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
TRIM40-207ENST00000396581 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
TRIM40-207ENST00000396581 TEX14Q8IWB6 1497 aa18.35■□□□□ 0.53
TRIM40-207ENST00000396581 PREX2Q70Z35 1606 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 L3MBTL2Q969R5 705 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
TRIM40-207ENST00000396581 CDC42BPBQ9Y5S2 1711 aa18.33■□□□□ 0.52
TRIM40-207ENST00000396581 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
TRIM40-207ENST00000396581 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
TRIM40-207ENST00000396581 CCDC184Q52MB2 194 aa18.32■□□□□ 0.52
TRIM40-207ENST00000396581 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
TRIM40-207ENST00000396581 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
TRIM40-207ENST00000396581 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
TRIM40-207ENST00000396581 RSPH4AQ5TD94 716 aa18.32■□□□□ 0.52
TRIM40-207ENST00000396581 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
TRIM40-207ENST00000396581 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
TRIM40-207ENST00000396581 PLCH2O75038 1416 aa18.3■□□□□ 0.52
TRIM40-207ENST00000396581 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
TRIM40-207ENST00000396581 SAMD9LQ8IVG5 1584 aa18.29■□□□□ 0.52
TRIM40-207ENST00000396581 CROCC2H7BZ55 1655 aa18.28■□□□□ 0.52
TRIM40-207ENST00000396581 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM40-207ENST00000396581 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
TRIM40-207ENST00000396581 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
TRIM40-207ENST00000396581 TSPY4P0CV99 314 aa18.27■□□□□ 0.52
TRIM40-207ENST00000396581 TSPY10P0CW01 314 aa18.27■□□□□ 0.52
TRIM40-207ENST00000396581 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
TRIM40-207ENST00000396581 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
TRIM40-207ENST00000396581 MYO5CQ9NQX4 1742 aa18.27■□□□□ 0.51
TRIM40-207ENST00000396581 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
TRIM40-207ENST00000396581 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
TRIM40-207ENST00000396581 PLEKHH2Q8IVE3 1493 aa18.25■□□□□ 0.51
TRIM40-207ENST00000396581 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
TRIM40-207ENST00000396581 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIM40-207ENST00000396581 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
TRIM40-207ENST00000396581 ADGBQ8N7X0 1667 aa18.24■□□□□ 0.51
TRIM40-207ENST00000396581 CCDC141Q6ZP82 1450 aa18.24■□□□□ 0.51
TRIM40-207ENST00000396581 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
TRIM40-207ENST00000396581 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
TRIM40-207ENST00000396581 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
TRIM40-207ENST00000396581 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
TRIM40-207ENST00000396581 FOXD1Q16676 465 aa18.2■□□□□ 0.5
TRIM40-207ENST00000396581 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
TRIM40-207ENST00000396581 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
TRIM40-207ENST00000396581 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
TRIM40-207ENST00000396581 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
TRIM40-207ENST00000396581 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
TRIM40-207ENST00000396581 ARHGEF12Q9NZN5 1544 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms