RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ZNF644Q9H582 1327 aaPredicted RBP23.72■■□□□ 1.39
TRIM39-205ENST00000396551 ADCY10Q96PN6 1610 aa23.72■■□□□ 1.39
TRIM39-205ENST00000396551 KIF14Q15058 1648 aa23.71■■□□□ 1.39
TRIM39-205ENST00000396551 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
TRIM39-205ENST00000396551 ITSN2Q9NZM3 1697 aa23.68■■□□□ 1.38
TRIM39-205ENST00000396551 ABCA8O94911 1581 aa23.67■■□□□ 1.38
TRIM39-205ENST00000396551 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
TRIM39-205ENST00000396551 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
TRIM39-205ENST00000396551 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.38
TRIM39-205ENST00000396551 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.38
TRIM39-205ENST00000396551 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.38
TRIM39-205ENST00000396551 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
TRIM39-205ENST00000396551 CROCC2H7BZ55 1655 aa23.58■■□□□ 1.37
TRIM39-205ENST00000396551 ADGBQ8N7X0 1667 aa23.58■■□□□ 1.37
TRIM39-205ENST00000396551 CFDP1Q9UEE9 299 aaPredicted RBP23.57■■□□□ 1.36
TRIM39-205ENST00000396551 ATP10BO94823 1461 aa23.57■■□□□ 1.36
TRIM39-205ENST00000396551 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
TRIM39-205ENST00000396551 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
TRIM39-205ENST00000396551 CHD1O14646 1710 aa23.56■■□□□ 1.36
TRIM39-205ENST00000396551 FOXD1Q16676 465 aa23.54■■□□□ 1.36
TRIM39-205ENST00000396551 ABCC10Q5T3U5 1492 aa23.53■■□□□ 1.36
TRIM39-205ENST00000396551 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
TRIM39-205ENST00000396551 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
TRIM39-205ENST00000396551 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
TRIM39-205ENST00000396551 ZNF777Q9ULD5 760 aaPredicted RBP23.5■■□□□ 1.35
TRIM39-205ENST00000396551 PLEKHD1A6NEE1 506 aa23.49■■□□□ 1.35
TRIM39-205ENST00000396551 PZPP20742 1482 aa23.47■■□□□ 1.35
TRIM39-205ENST00000396551 MYT1Q01538 1121 aa23.46■■□□□ 1.35
TRIM39-205ENST00000396551 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
TRIM39-205ENST00000396551 PTPRGP23470 1445 aa23.45■■□□□ 1.34
TRIM39-205ENST00000396551 L3MBTL2Q969R5 705 aa23.44■■□□□ 1.34
TRIM39-205ENST00000396551 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
TRIM39-205ENST00000396551 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
TRIM39-205ENST00000396551 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
TRIM39-205ENST00000396551 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.33
TRIM39-205ENST00000396551 HSPA5P11021 654 aaKnown RBP23.38■■□□□ 1.33
TRIM39-205ENST00000396551 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
TRIM39-205ENST00000396551 CDC42BPBQ9Y5S2 1711 aa23.35■■□□□ 1.33
TRIM39-205ENST00000396551 ANP32CO43423 234 aa23.35■■□□□ 1.33
TRIM39-205ENST00000396551 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
TRIM39-205ENST00000396551 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
TRIM39-205ENST00000396551 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
TRIM39-205ENST00000396551 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
TRIM39-205ENST00000396551 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
TRIM39-205ENST00000396551 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
TRIM39-205ENST00000396551 ARHGEF5Q12774 1597 aa23.32■■□□□ 1.32
TRIM39-205ENST00000396551 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
TRIM39-205ENST00000396551 KIAA1107Q9UPP5 1409 aa23.31■■□□□ 1.32
TRIM39-205ENST00000396551 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
TRIM39-205ENST00000396551 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
TRIM39-205ENST00000396551 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
TRIM39-205ENST00000396551 HNRNPMP52272 730 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRIM39-205ENST00000396551 PKD2Q13563 968 aa23.25■■□□□ 1.31
TRIM39-205ENST00000396551 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
TRIM39-205ENST00000396551 KDM5DQ9BY66 1539 aa23.24■■□□□ 1.31
TRIM39-205ENST00000396551 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
TRIM39-205ENST00000396551 TSPY4P0CV99 314 aa23.23■■□□□ 1.31
TRIM39-205ENST00000396551 TSPY10P0CW01 314 aa23.23■■□□□ 1.31
TRIM39-205ENST00000396551 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
TRIM39-205ENST00000396551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.22■■□□□ 1.31
TRIM39-205ENST00000396551 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
TRIM39-205ENST00000396551 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
TRIM39-205ENST00000396551 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
TRIM39-205ENST00000396551 NUP155O75694 1391 aa23.21■■□□□ 1.31
TRIM39-205ENST00000396551 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
TRIM39-205ENST00000396551 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
TRIM39-205ENST00000396551 POLR1AO95602 1720 aaPredicted RBP23.19■■□□□ 1.3
TRIM39-205ENST00000396551 CCDC7Q96M83 1385 aa23.18■■□□□ 1.3
TRIM39-205ENST00000396551 SYCP2Q9BX26 1530 aa23.17■■□□□ 1.3
TRIM39-205ENST00000396551 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
TRIM39-205ENST00000396551 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
TRIM39-205ENST00000396551 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
TRIM39-205ENST00000396551 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
TRIM39-205ENST00000396551 ZCCHC11Q5TAX3 1644 aaKnown RBP23.12■■□□□ 1.29
TRIM39-205ENST00000396551 RSPH4AQ5TD94 716 aa23.11■■□□□ 1.29
TRIM39-205ENST00000396551 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.28
TRIM39-205ENST00000396551 KIF7Q2M1P5 1343 aa23.07■■□□□ 1.28
TRIM39-205ENST00000396551 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
TRIM39-205ENST00000396551 UHRF1BP1Q6BDS2 1440 aa23.07■■□□□ 1.28
TRIM39-205ENST00000396551 BCORL1Q5H9F3 1711 aa23.06■■□□□ 1.28
TRIM39-205ENST00000396551 UNC13BO14795 1591 aa23.06■■□□□ 1.28
TRIM39-205ENST00000396551 KDM5CP41229 1560 aa23.06■■□□□ 1.28
TRIM39-205ENST00000396551 ARHGEF12Q9NZN5 1544 aa23.06■■□□□ 1.28
TRIM39-205ENST00000396551 PLXNC1O60486 1568 aa23.05■■□□□ 1.28
TRIM39-205ENST00000396551 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
TRIM39-205ENST00000396551 PLEKHH2Q8IVE3 1493 aa23.03■■□□□ 1.28
TRIM39-205ENST00000396551 USP47Q96K76 1375 aa23.03■■□□□ 1.28
TRIM39-205ENST00000396551 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
TRIM39-205ENST00000396551 PLCH2O75038 1416 aa23■■□□□ 1.27
TRIM39-205ENST00000396551 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
TRIM39-205ENST00000396551 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
TRIM39-205ENST00000396551 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
TRIM39-205ENST00000396551 ABCC1P33527 1531 aa22.96■■□□□ 1.27
TRIM39-205ENST00000396551 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
TRIM39-205ENST00000396551 PLA2R1Q13018 1463 aa22.93■■□□□ 1.26
TRIM39-205ENST00000396551 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
TRIM39-205ENST00000396551 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
TRIM39-205ENST00000396551 MAGI2Q86UL8 1455 aa22.91■■□□□ 1.26
TRIM39-205ENST00000396551 EFCAB2Q5VUJ9 269 aa22.91■■□□□ 1.26
TRIM39-205ENST00000396551 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms