RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 L3MBTL2Q969R5 705 aa16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 TCOF1Q13428 1488 aaKnown RBP16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
PDXDC1-202ENST00000396410 DAPK1P53355 1430 aa16.08■□□□□ 0.17
PDXDC1-202ENST00000396410 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.16
PDXDC1-202ENST00000396410 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.16
PDXDC1-202ENST00000396410 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.16
PDXDC1-202ENST00000396410 RAPGEF6Q8TEU7 1601 aa16.07■□□□□ 0.16
PDXDC1-202ENST00000396410 CCER2I3L3R5 266 aa16.05■□□□□ 0.16
PDXDC1-202ENST00000396410 ANKRD30AQ9BXX3 1397 aa16.05■□□□□ 0.16
PDXDC1-202ENST00000396410 BCANQ96GW7 911 aa16.05■□□□□ 0.16
PDXDC1-202ENST00000396410 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
PDXDC1-202ENST00000396410 ABCC5O15440 1437 aa16.03■□□□□ 0.16
PDXDC1-202ENST00000396410 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
PDXDC1-202ENST00000396410 PTPRGP23470 1445 aa16.02■□□□□ 0.16
PDXDC1-202ENST00000396410 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
PDXDC1-202ENST00000396410 PKD2Q13563 968 aa16.02■□□□□ 0.15
PDXDC1-202ENST00000396410 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
PDXDC1-202ENST00000396410 HNRNPUQ00839 825 aaKnown RBP eCLIP16■□□□□ 0.15
PDXDC1-202ENST00000396410 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDXDC1-202ENST00000396410 FKBP8Q14318 412 aa15.99■□□□□ 0.15
PDXDC1-202ENST00000396410 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
PDXDC1-202ENST00000396410 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
PDXDC1-202ENST00000396410 CAMSAP2Q08AD1 1489 aa15.98■□□□□ 0.15
PDXDC1-202ENST00000396410 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
PDXDC1-202ENST00000396410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■□□□ 12.8
PDXDC1-202ENST00000396410 NUP155O75694 1391 aa15.97■□□□□ 0.15
PDXDC1-202ENST00000396410 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
PDXDC1-202ENST00000396410 NUP160Q12769 1436 aa15.94■□□□□ 0.14
PDXDC1-202ENST00000396410 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
PDXDC1-202ENST00000396410 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
PDXDC1-202ENST00000396410 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
PDXDC1-202ENST00000396410 DNMT1P26358 1616 aaKnown RBP15.92■□□□□ 0.14
PDXDC1-202ENST00000396410 ANKRD30BQ9BXX2 1392 aa15.91■□□□□ 0.14
PDXDC1-202ENST00000396410 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
PDXDC1-202ENST00000396410 KDM6BO15054 1643 aa15.91■□□□□ 0.14
PDXDC1-202ENST00000396410 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
PDXDC1-202ENST00000396410 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
PDXDC1-202ENST00000396410 ITSN2Q9NZM3 1697 aa15.9■□□□□ 0.14
PDXDC1-202ENST00000396410 KIF14Q15058 1648 aa15.89■□□□□ 0.13
PDXDC1-202ENST00000396410 NBPF8Q3BBV2 869 aa15.89■□□□□ 0.13
PDXDC1-202ENST00000396410 CARD11Q9BXL7 1154 aa15.88■□□□□ 0.13
PDXDC1-202ENST00000396410 ATP10BO94823 1461 aa15.88■□□□□ 0.13
PDXDC1-202ENST00000396410 C9orf84Q5VXU9 1444 aa15.88■□□□□ 0.13
PDXDC1-202ENST00000396410 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
PDXDC1-202ENST00000396410 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
PDXDC1-202ENST00000396410 DCAF11Q8TEB1 546 aa15.86■□□□□ 0.13
PDXDC1-202ENST00000396410 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
PDXDC1-202ENST00000396410 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
PDXDC1-202ENST00000396410 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
PDXDC1-202ENST00000396410 CCDC7Q96M83 1385 aa15.83■□□□□ 0.13
PDXDC1-202ENST00000396410 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
PDXDC1-202ENST00000396410 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
PDXDC1-202ENST00000396410 USP47Q96K76 1375 aa15.79■□□□□ 0.12
PDXDC1-202ENST00000396410 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
PDXDC1-202ENST00000396410 ARHGAP5Q13017 1502 aa15.79■□□□□ 0.12
PDXDC1-202ENST00000396410 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
PDXDC1-202ENST00000396410 PRKRIP1Q9H875 184 aaPredicted RBP15.78■□□□□ 0.12
PDXDC1-202ENST00000396410 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
PDXDC1-202ENST00000396410 ABCA8O94911 1581 aa15.78■□□□□ 0.12
PDXDC1-202ENST00000396410 PZPP20742 1482 aa15.77■□□□□ 0.11
PDXDC1-202ENST00000396410 IRX6P78412 446 aaPredicted RBP15.75■□□□□ 0.11
PDXDC1-202ENST00000396410 ADGRL2O95490 1459 aa15.75■□□□□ 0.11
PDXDC1-202ENST00000396410 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
PDXDC1-202ENST00000396410 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
PDXDC1-202ENST00000396410 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
PDXDC1-202ENST00000396410 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
PDXDC1-202ENST00000396410 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
PDXDC1-202ENST00000396410 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
PDXDC1-202ENST00000396410 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
PDXDC1-202ENST00000396410 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
PDXDC1-202ENST00000396410 KDM5BQ9UGL1 1544 aa15.72■□□□□ 0.11
PDXDC1-202ENST00000396410 SHANK2Q9UPX8 1470 aa15.71■□□□□ 0.11
PDXDC1-202ENST00000396410 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDXDC1-202ENST00000396410 ST20-MTHFSA0A0A6YYL1 179 aa15.7■□□□□ 0.1
PDXDC1-202ENST00000396410 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
PDXDC1-202ENST00000396410 SPAG9O60271 1321 aaKnown RBP15.67■□□□□ 0.1
PDXDC1-202ENST00000396410 CDC42BPAQ5VT25 1732 aa15.67■□□□□ 0.1
PDXDC1-202ENST00000396410 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
PDXDC1-202ENST00000396410 CHD1O14646 1710 aa15.66■□□□□ 0.1
PDXDC1-202ENST00000396410 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
PDXDC1-202ENST00000396410 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
PDXDC1-202ENST00000396410 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
PDXDC1-202ENST00000396410 CROCC2H7BZ55 1655 aa15.63■□□□□ 0.09
PDXDC1-202ENST00000396410 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
PDXDC1-202ENST00000396410 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
PDXDC1-202ENST00000396410 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
PDXDC1-202ENST00000396410 ARHGEF5Q12774 1597 aa15.6■□□□□ 0.09
PDXDC1-202ENST00000396410 AFAP1Q8N556 730 aa15.6■□□□□ 0.09
PDXDC1-202ENST00000396410 KANK1Q14678 1352 aa15.6■□□□□ 0.09
PDXDC1-202ENST00000396410 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
PDXDC1-202ENST00000396410 SAMD9LQ8IVG5 1584 aa15.59■□□□□ 0.09
PDXDC1-202ENST00000396410 FAM135AQ9P2D6 1515 aa15.59■□□□□ 0.09
PDXDC1-202ENST00000396410 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.09
PDXDC1-202ENST00000396410 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
PDXDC1-202ENST00000396410 TMF1P82094 1093 aa15.58■□□□□ 0.08
PDXDC1-202ENST00000396410 SPATA31E1Q6ZUB1 1445 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms