RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
NDE1-202ENST00000396355 MSH5O43196 834 aa11.52□□□□□ -0.57
NDE1-202ENST00000396355 RAB3GAP2Q9H2M9 1393 aa11.52□□□□□ -0.57
NDE1-202ENST00000396355 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
NDE1-202ENST00000396355 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
NDE1-202ENST00000396355 ERCC6L2Q5T890 1561 aa11.51□□□□□ -0.57
NDE1-202ENST00000396355 MLECQ14165 292 aa11.49□□□□□ -0.57
NDE1-202ENST00000396355 KDM4FA0A1W2PPD8 638 aa11.49□□□□□ -0.57
NDE1-202ENST00000396355 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
NDE1-202ENST00000396355 NUP160Q12769 1436 aa11.48□□□□□ -0.57
NDE1-202ENST00000396355 WDR97A6NE52 1622 aa11.48□□□□□ -0.57
NDE1-202ENST00000396355 CTTNBP2Q8WZ74 1663 aa11.48□□□□□ -0.57
NDE1-202ENST00000396355 ARID3AQ99856 593 aa11.47□□□□□ -0.57
NDE1-202ENST00000396355 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
NDE1-202ENST00000396355 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
NDE1-202ENST00000396355 LRRIQ1Q96JM4 1722 aa11.45□□□□□ -0.58
NDE1-202ENST00000396355 CUL7Q14999 1698 aa11.45□□□□□ -0.58
NDE1-202ENST00000396355 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
NDE1-202ENST00000396355 HNRNPUQ00839 825 aaKnown RBP eCLIP11.43□□□□□ -0.58
NDE1-202ENST00000396355 PDE4CQ08493 712 aa11.43□□□□□ -0.58
NDE1-202ENST00000396355 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
NDE1-202ENST00000396355 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
NDE1-202ENST00000396355 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
NDE1-202ENST00000396355 EFCAB5A4FU69 1503 aa11.42□□□□□ -0.58
NDE1-202ENST00000396355 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
NDE1-202ENST00000396355 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
NDE1-202ENST00000396355 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
NDE1-202ENST00000396355 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
NDE1-202ENST00000396355 KIAA0586Q9BVV6 1533 aa11.41□□□□□ -0.58
NDE1-202ENST00000396355 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
NDE1-202ENST00000396355 CASKIN1Q8WXD9 1431 aa11.41□□□□□ -0.58
NDE1-202ENST00000396355 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
NDE1-202ENST00000396355 ASXL2Q76L83 1435 aa11.4□□□□□ -0.59
NDE1-202ENST00000396355 TSPOAP1O95153 1857 aa11.4□□□□□ -0.59
NDE1-202ENST00000396355 KDM6BO15054 1643 aa11.4□□□□□ -0.59
NDE1-202ENST00000396355 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.59
NDE1-202ENST00000396355 ANP32CO43423 234 aa11.39□□□□□ -0.59
NDE1-202ENST00000396355 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
NDE1-202ENST00000396355 SIN3AQ96ST3 1273 aa11.38□□□□□ -0.59
NDE1-202ENST00000396355 SAMD9Q5K651 1589 aa11.38□□□□□ -0.59
NDE1-202ENST00000396355 HSP90AA1P07900 732 aaKnown RBP11.38□□□□□ -0.59
NDE1-202ENST00000396355 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
NDE1-202ENST00000396355 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
NDE1-202ENST00000396355 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
NDE1-202ENST00000396355 HIRIP3Q9BW71 556 aaPredicted RBP11.36□□□□□ -0.59
NDE1-202ENST00000396355 RAPGEF3O95398 923 aa11.36□□□□□ -0.59
NDE1-202ENST00000396355 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
NDE1-202ENST00000396355 PTPRKQ15262 1439 aa11.35□□□□□ -0.59
NDE1-202ENST00000396355 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
NDE1-202ENST00000396355 FGD6Q6ZV73 1430 aa11.34□□□□□ -0.59
NDE1-202ENST00000396355 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
NDE1-202ENST00000396355 CD109Q6YHK3 1445 aa11.33□□□□□ -0.6
NDE1-202ENST00000396355 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
NDE1-202ENST00000396355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.32□□□□□ -0.6
NDE1-202ENST00000396355 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
NDE1-202ENST00000396355 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
NDE1-202ENST00000396355 HSPA2P54652 639 aa11.3□□□□□ -0.6
NDE1-202ENST00000396355 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
NDE1-202ENST00000396355 PTPN23Q9H3S7 1636 aa11.29□□□□□ -0.6
NDE1-202ENST00000396355 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
NDE1-202ENST00000396355 ABCC2Q92887 1545 aa11.28□□□□□ -0.6
NDE1-202ENST00000396355 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
NDE1-202ENST00000396355 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
NDE1-202ENST00000396355 USP35Q9P2H5 1018 aa11.28□□□□□ -0.6
NDE1-202ENST00000396355 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.6
NDE1-202ENST00000396355 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
NDE1-202ENST00000396355 HFM1A2PYH4 1435 aa11.27□□□□□ -0.61
NDE1-202ENST00000396355 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
NDE1-202ENST00000396355 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
NDE1-202ENST00000396355 FBXO41Q8TF61 875 aa11.25□□□□□ -0.61
NDE1-202ENST00000396355 NAIPQ13075 1403 aa11.25□□□□□ -0.61
NDE1-202ENST00000396355 MYOM3Q5VTT5 1437 aa11.25□□□□□ -0.61
NDE1-202ENST00000396355 UGGT2Q9NYU1 1516 aa11.25□□□□□ -0.61
NDE1-202ENST00000396355 KDM5BQ9UGL1 1544 aa11.25□□□□□ -0.61
NDE1-202ENST00000396355 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
NDE1-202ENST00000396355 CDK11BP21127 795 aaKnown RBP11.24□□□□□ -0.61
NDE1-202ENST00000396355 RBM10P98175 930 aaKnown RBP11.24□□□□□ -0.61
NDE1-202ENST00000396355 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
NDE1-202ENST00000396355 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
NDE1-202ENST00000396355 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
NDE1-202ENST00000396355 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
NDE1-202ENST00000396355 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
NDE1-202ENST00000396355 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
NDE1-202ENST00000396355 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
NDE1-202ENST00000396355 IQGAP2Q13576 1575 aa11.21□□□□□ -0.61
NDE1-202ENST00000396355 DIP2BQ9P265 1576 aa11.21□□□□□ -0.62
NDE1-202ENST00000396355 IPO9Q96P70 1041 aaKnown RBP11.21□□□□□ -0.62
NDE1-202ENST00000396355 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
NDE1-202ENST00000396355 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
NDE1-202ENST00000396355 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
NDE1-202ENST00000396355 GCC2Q8IWJ2 1684 aa11.19□□□□□ -0.62
NDE1-202ENST00000396355 PPP4R2Q9NY27 417 aa11.19□□□□□ -0.62
NDE1-202ENST00000396355 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
NDE1-202ENST00000396355 HECW1Q76N89 1606 aa11.18□□□□□ -0.62
NDE1-202ENST00000396355 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
NDE1-202ENST00000396355 EPRSP07814 1512 aaKnown RBP11.18□□□□□ -0.62
NDE1-202ENST00000396355 TCOF1Q13428 1488 aaKnown RBP11.17□□□□□ -0.62
NDE1-202ENST00000396355 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
NDE1-202ENST00000396355 GSE1Q14687 1217 aa11.17□□□□□ -0.62
NDE1-202ENST00000396355 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms