RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 BCL11AQ9H165 835 aa22.62■■□□□ 1.21
CCHCR1-202ENST00000396263 CCER2I3L3R5 266 aa22.6■■□□□ 1.21
CCHCR1-202ENST00000396263 PTPRGP23470 1445 aa22.59■■□□□ 1.21
CCHCR1-202ENST00000396263 HIRIP3Q9BW71 556 aaPredicted RBP22.59■■□□□ 1.21
CCHCR1-202ENST00000396263 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
CCHCR1-202ENST00000396263 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
CCHCR1-202ENST00000396263 KDM6BO15054 1643 aa22.56■■□□□ 1.2
CCHCR1-202ENST00000396263 ANP32CO43423 234 aa22.55■■□□□ 1.2
CCHCR1-202ENST00000396263 ANP32EQ9BTT0 268 aa22.55■■□□□ 1.2
CCHCR1-202ENST00000396263 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
CCHCR1-202ENST00000396263 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
CCHCR1-202ENST00000396263 ATP10BO94823 1461 aa22.5■■□□□ 1.19
CCHCR1-202ENST00000396263 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
CCHCR1-202ENST00000396263 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
CCHCR1-202ENST00000396263 DAPK1P53355 1430 aa22.48■■□□□ 1.19
CCHCR1-202ENST00000396263 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
CCHCR1-202ENST00000396263 TROQ12816 1431 aaPredicted RBP22.47■■□□□ 1.19
CCHCR1-202ENST00000396263 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
CCHCR1-202ENST00000396263 MPHOSPH9Q99550 1183 aa22.46■■□□□ 1.19
CCHCR1-202ENST00000396263 KIF14Q15058 1648 aa22.45■■□□□ 1.18
CCHCR1-202ENST00000396263 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
CCHCR1-202ENST00000396263 ABCC5O15440 1437 aa22.43■■□□□ 1.18
CCHCR1-202ENST00000396263 ABCC2Q92887 1545 aa22.43■■□□□ 1.18
CCHCR1-202ENST00000396263 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
CCHCR1-202ENST00000396263 ANKRD30BQ9BXX2 1392 aa22.37■■□□□ 1.17
CCHCR1-202ENST00000396263 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
CCHCR1-202ENST00000396263 HSPA5P11021 654 aaKnown RBP22.36■■□□□ 1.17
CCHCR1-202ENST00000396263 ITSN2Q9NZM3 1697 aa22.36■■□□□ 1.17
CCHCR1-202ENST00000396263 PLEKHD1A6NEE1 506 aa22.35■■□□□ 1.17
CCHCR1-202ENST00000396263 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
CCHCR1-202ENST00000396263 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCHCR1-202ENST00000396263 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
CCHCR1-202ENST00000396263 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.16
CCHCR1-202ENST00000396263 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
CCHCR1-202ENST00000396263 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
CCHCR1-202ENST00000396263 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
CCHCR1-202ENST00000396263 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
CCHCR1-202ENST00000396263 CAMSAP2Q08AD1 1489 aa22.31■■□□□ 1.16
CCHCR1-202ENST00000396263 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
CCHCR1-202ENST00000396263 GPATCH8Q9UKJ3 1502 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-202ENST00000396263 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
CCHCR1-202ENST00000396263 FOXD1Q16676 465 aa22.29■■□□□ 1.16
CCHCR1-202ENST00000396263 FKBP8Q14318 412 aa22.28■■□□□ 1.16
CCHCR1-202ENST00000396263 CROCC2H7BZ55 1655 aa22.27■■□□□ 1.16
CCHCR1-202ENST00000396263 ADGRL2O95490 1459 aa22.26■■□□□ 1.15
CCHCR1-202ENST00000396263 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
CCHCR1-202ENST00000396263 CNTLNQ9NXG0 1405 aa22.26■■□□□ 1.15
CCHCR1-202ENST00000396263 PZPP20742 1482 aa22.24■■□□□ 1.15
CCHCR1-202ENST00000396263 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
CCHCR1-202ENST00000396263 CFDP1Q9UEE9 299 aaPredicted RBP22.24■■□□□ 1.15
CCHCR1-202ENST00000396263 NEFLP07196 543 aa22.22■■□□□ 1.15
CCHCR1-202ENST00000396263 POLR1AO95602 1720 aaPredicted RBP22.22■■□□□ 1.15
CCHCR1-202ENST00000396263 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
CCHCR1-202ENST00000396263 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
CCHCR1-202ENST00000396263 TTC37Q6PGP7 1564 aa22.2■■□□□ 1.14
CCHCR1-202ENST00000396263 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
CCHCR1-202ENST00000396263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.141e-5■■■■□ 25.8
CCHCR1-202ENST00000396263 CDC42BPBQ9Y5S2 1711 aa22.18■■□□□ 1.14
CCHCR1-202ENST00000396263 BCANQ96GW7 911 aa22.17■■□□□ 1.14
CCHCR1-202ENST00000396263 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
CCHCR1-202ENST00000396263 C11orf95C9JLR9 678 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-202ENST00000396263 ZNF777Q9ULD5 760 aaPredicted RBP22.15■■□□□ 1.14
CCHCR1-202ENST00000396263 KIAA1107Q9UPP5 1409 aa22.15■■□□□ 1.14
CCHCR1-202ENST00000396263 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
CCHCR1-202ENST00000396263 MBD5Q9P267 1494 aa22.14■■□□□ 1.14
CCHCR1-202ENST00000396263 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
CCHCR1-202ENST00000396263 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
CCHCR1-202ENST00000396263 MYO5CQ9NQX4 1742 aa22.11■■□□□ 1.13
CCHCR1-202ENST00000396263 PRKRIP1Q9H875 184 aaPredicted RBP22.09■■□□□ 1.13
CCHCR1-202ENST00000396263 SAMD9LQ8IVG5 1584 aa22.09■■□□□ 1.13
CCHCR1-202ENST00000396263 ANKRD50Q9ULJ7 1429 aa22.09■■□□□ 1.13
CCHCR1-202ENST00000396263 KIF7Q2M1P5 1343 aa22.07■■□□□ 1.12
CCHCR1-202ENST00000396263 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
CCHCR1-202ENST00000396263 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
CCHCR1-202ENST00000396263 KDM5DQ9BY66 1539 aa22.04■■□□□ 1.12
CCHCR1-202ENST00000396263 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
CCHCR1-202ENST00000396263 PKD2Q13563 968 aa22.03■■□□□ 1.12
CCHCR1-202ENST00000396263 CCDC184Q52MB2 194 aa22.02■■□□□ 1.12
CCHCR1-202ENST00000396263 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
CCHCR1-202ENST00000396263 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
CCHCR1-202ENST00000396263 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
CCHCR1-202ENST00000396263 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
CCHCR1-202ENST00000396263 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
CCHCR1-202ENST00000396263 UHRF1BP1Q6BDS2 1440 aa22■■□□□ 1.11
CCHCR1-202ENST00000396263 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
CCHCR1-202ENST00000396263 PLCH2O75038 1416 aa21.99■■□□□ 1.11
CCHCR1-202ENST00000396263 KDM5CP41229 1560 aa21.99■■□□□ 1.11
CCHCR1-202ENST00000396263 HNRNPMP52272 730 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCHCR1-202ENST00000396263 BCORL1Q5H9F3 1711 aa21.98■■□□□ 1.11
CCHCR1-202ENST00000396263 ARHGEF12Q9NZN5 1544 aa21.97■■□□□ 1.11
CCHCR1-202ENST00000396263 USP47Q96K76 1375 aa21.97■■□□□ 1.11
CCHCR1-202ENST00000396263 NUP155O75694 1391 aa21.96■■□□□ 1.11
CCHCR1-202ENST00000396263 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
CCHCR1-202ENST00000396263 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
CCHCR1-202ENST00000396263 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
CCHCR1-202ENST00000396263 RALGAPBQ86X10 1494 aa21.95■■□□□ 1.1
CCHCR1-202ENST00000396263 TSPY4P0CV99 314 aa21.95■■□□□ 1.1
CCHCR1-202ENST00000396263 TSPY10P0CW01 314 aa21.95■■□□□ 1.1
CCHCR1-202ENST00000396263 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
CCHCR1-202ENST00000396263 ZBED9Q6R2W3 1325 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms