RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 ZHX1Q9UKY1 873 aaPredicted RBP9.66□□□□□ -0.86
BDNF-207ENST00000395986 FANCD2Q9BXW9 1451 aa9.66□□□□□ -0.86
BDNF-207ENST00000395986 AAMPQ13685 434 aa9.66□□□□□ -0.86
BDNF-207ENST00000395986 TMC1Q8TDI8 760 aa9.66□□□□□ -0.86
BDNF-207ENST00000395986 RAPGEF2Q9Y4G8 1499 aa9.66□□□□□ -0.86
BDNF-207ENST00000395986 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
BDNF-207ENST00000395986 EIF4G2P78344 907 aaKnown RBP eCLIP9.65□□□□□ -0.86
BDNF-207ENST00000395986 FOXD1Q16676 465 aa9.65□□□□□ -0.87
BDNF-207ENST00000395986 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
BDNF-207ENST00000395986 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
BDNF-207ENST00000395986 MAPK8IP2Q13387 824 aaPredicted RBP9.64□□□□□ -0.87
BDNF-207ENST00000395986 ERCC6Q03468 1493 aa9.63□□□□□ -0.87
BDNF-207ENST00000395986 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
BDNF-207ENST00000395986 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
BDNF-207ENST00000395986 FGD1P98174 961 aa9.63□□□□□ -0.87
BDNF-207ENST00000395986 RRP1P56182 461 aaKnown RBP9.62□□□□□ -0.87
BDNF-207ENST00000395986 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
BDNF-207ENST00000395986 WDR62O43379 1518 aa9.62□□□□□ -0.87
BDNF-207ENST00000395986 RCAN3Q9UKA8 241 aa9.62□□□□□ -0.87
BDNF-207ENST00000395986 CEP164Q9UPV0 1460 aa9.61□□□□□ -0.87
BDNF-207ENST00000395986 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
BDNF-207ENST00000395986 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
BDNF-207ENST00000395986 GOLGA6L3A6NEY3 463 aa9.6□□□□□ -0.87
BDNF-207ENST00000395986 XRCC6P12956 609 aaKnown RBP eCLIP9.6□□□□□ -0.87
BDNF-207ENST00000395986 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
BDNF-207ENST00000395986 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
BDNF-207ENST00000395986 KIF21BO75037 1637 aa9.59□□□□□ -0.87
BDNF-207ENST00000395986 L1TD1Q5T7N2 865 aaKnown RBP9.58□□□□□ -0.88
BDNF-207ENST00000395986 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
BDNF-207ENST00000395986 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
BDNF-207ENST00000395986 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
BDNF-207ENST00000395986 RRP7BPQ9NSQ0 103 aa9.57□□□□□ -0.88
BDNF-207ENST00000395986 CUX1P39880 1505 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 MYH16Q9H6N6 1097 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 CUX2O14529 1486 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 TOPBP1Q92547 1522 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 MS4A1P11836 297 aa9.55□□□□□ -0.88
BDNF-207ENST00000395986 CLCN1P35523 988 aa9.54□□□□□ -0.88
BDNF-207ENST00000395986 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
BDNF-207ENST00000395986 ESPNB1AK53 854 aa9.54□□□□□ -0.88
BDNF-207ENST00000395986 ERBB4Q15303 1308 aa9.53□□□□□ -0.88
BDNF-207ENST00000395986 VGLL3A8MV65 326 aa9.53□□□□□ -0.88
BDNF-207ENST00000395986 DNMBPQ6XZF7 1577 aa9.53□□□□□ -0.88
BDNF-207ENST00000395986 RRBP1Q9P2E9 1410 aaKnown RBP9.53□□□□□ -0.88
BDNF-207ENST00000395986 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
BDNF-207ENST00000395986 SYNJ1O43426 1573 aa9.52□□□□□ -0.89
BDNF-207ENST00000395986 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
BDNF-207ENST00000395986 CNTLNQ9NXG0 1405 aa9.51□□□□□ -0.89
BDNF-207ENST00000395986 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
BDNF-207ENST00000395986 R3HCC1Q9Y3T6 440 aaKnown RBP9.51□□□□□ -0.89
BDNF-207ENST00000395986 TARBP1Q13395 1621 aaKnown RBP9.51□□□□□ -0.89
BDNF-207ENST00000395986 KIF7Q2M1P5 1343 aa9.5□□□□□ -0.89
BDNF-207ENST00000395986 SEC24BO95487 1268 aa9.5□□□□□ -0.89
BDNF-207ENST00000395986 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
BDNF-207ENST00000395986 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
BDNF-207ENST00000395986 PRDM4Q9UKN5 801 aa9.5□□□□□ -0.89
BDNF-207ENST00000395986 ARAP1Q96P48 1450 aa9.49□□□□□ -0.89
BDNF-207ENST00000395986 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
BDNF-207ENST00000395986 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
BDNF-207ENST00000395986 CCDC7Q96M83 1385 aa9.49□□□□□ -0.89
BDNF-207ENST00000395986 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
BDNF-207ENST00000395986 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
BDNF-207ENST00000395986 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
BDNF-207ENST00000395986 IGSF3O75054 1194 aa9.48□□□□□ -0.89
BDNF-207ENST00000395986 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
BDNF-207ENST00000395986 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
BDNF-207ENST00000395986 BECN1Q14457 450 aa9.47□□□□□ -0.89
BDNF-207ENST00000395986 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
BDNF-207ENST00000395986 RNF123Q5XPI4 1314 aa9.46□□□□□ -0.89
BDNF-207ENST00000395986 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.89
BDNF-207ENST00000395986 KIF27Q86VH2 1401 aa9.46□□□□□ -0.9
BDNF-207ENST00000395986 TRAK2O60296 914 aa9.46□□□□□ -0.9
BDNF-207ENST00000395986 NAP1L2Q9ULW6 460 aaPredicted RBP9.46□□□□□ -0.9
BDNF-207ENST00000395986 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
BDNF-207ENST00000395986 NBPF8Q3BBV2 869 aa9.45□□□□□ -0.9
BDNF-207ENST00000395986 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
BDNF-207ENST00000395986 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
BDNF-207ENST00000395986 CALD1Q05682 793 aaKnown RBP9.45□□□□□ -0.9
BDNF-207ENST00000395986 MPNDQ8N594 471 aa9.45□□□□□ -0.9
BDNF-207ENST00000395986 ANP32BQ92688 251 aaKnown RBP9.44□□□□□ -0.9
BDNF-207ENST00000395986 CANXP27824 592 aaKnown RBP9.44□□□□□ -0.9
BDNF-207ENST00000395986 MSNP26038 577 aaKnown RBP9.43□□□□□ -0.9
BDNF-207ENST00000395986 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
BDNF-207ENST00000395986 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
BDNF-207ENST00000395986 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
BDNF-207ENST00000395986 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
BDNF-207ENST00000395986 FAM177BA6PVY3 158 aa9.42□□□□□ -0.9
BDNF-207ENST00000395986 ZBTB22O15209 634 aa9.42□□□□□ -0.9
BDNF-207ENST00000395986 TSC1Q92574 1164 aa9.42□□□□□ -0.9
BDNF-207ENST00000395986 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
BDNF-207ENST00000395986 MCM4P33991 863 aa9.42□□□□□ -0.9
BDNF-207ENST00000395986 TPM2P07951 284 aa9.41□□□□□ -0.9
BDNF-207ENST00000395986 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
BDNF-207ENST00000395986 MRE11P49959 708 aa9.41□□□□□ -0.9
BDNF-207ENST00000395986 CBX1P83916 185 aa9.41□□□□□ -0.9
BDNF-207ENST00000395986 TPRNQ4KMQ1 711 aa9.41□□□□□ -0.9
BDNF-207ENST00000395986 E9PSI1 815 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms