RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
PHACTR3-205ENST00000395636 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
PHACTR3-205ENST00000395636 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
PHACTR3-205ENST00000395636 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
PHACTR3-205ENST00000395636 TCOF1Q13428 1488 aaKnown RBP17.16■□□□□ 0.34
PHACTR3-205ENST00000395636 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
PHACTR3-205ENST00000395636 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
PHACTR3-205ENST00000395636 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
PHACTR3-205ENST00000395636 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
PHACTR3-205ENST00000395636 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
PHACTR3-205ENST00000395636 MIER1Q8N108 512 aa17.13■□□□□ 0.33
PHACTR3-205ENST00000395636 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
PHACTR3-205ENST00000395636 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
PHACTR3-205ENST00000395636 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
PHACTR3-205ENST00000395636 TTC37Q6PGP7 1564 aa17.1■□□□□ 0.33
PHACTR3-205ENST00000395636 CAMSAP2Q08AD1 1489 aa17.1■□□□□ 0.33
PHACTR3-205ENST00000395636 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
PHACTR3-205ENST00000395636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHACTR3-205ENST00000395636 ABCC5O15440 1437 aa17.07■□□□□ 0.32
PHACTR3-205ENST00000395636 CDC42BPBQ9Y5S2 1711 aa17.07■□□□□ 0.32
PHACTR3-205ENST00000395636 DAPK1P53355 1430 aa17.06■□□□□ 0.32
PHACTR3-205ENST00000395636 NAIPQ13075 1403 aa17.06■□□□□ 0.32
PHACTR3-205ENST00000395636 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
PHACTR3-205ENST00000395636 KDM6BO15054 1643 aa17.05■□□□□ 0.32
PHACTR3-205ENST00000395636 DNMT1P26358 1616 aaKnown RBP17.04■□□□□ 0.32
PHACTR3-205ENST00000395636 HNRNPMP52272 730 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHACTR3-205ENST00000395636 PREX2Q70Z35 1606 aa17.01■□□□□ 0.31
PHACTR3-205ENST00000395636 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
PHACTR3-205ENST00000395636 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
PHACTR3-205ENST00000395636 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
PHACTR3-205ENST00000395636 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
PHACTR3-205ENST00000395636 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
PHACTR3-205ENST00000395636 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
PHACTR3-205ENST00000395636 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
PHACTR3-205ENST00000395636 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
PHACTR3-205ENST00000395636 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
PHACTR3-205ENST00000395636 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
PHACTR3-205ENST00000395636 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
PHACTR3-205ENST00000395636 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.31
PHACTR3-205ENST00000395636 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
PHACTR3-205ENST00000395636 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
PHACTR3-205ENST00000395636 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
PHACTR3-205ENST00000395636 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
PHACTR3-205ENST00000395636 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHACTR3-205ENST00000395636 PLCH2O75038 1416 aa16.92■□□□□ 0.3
PHACTR3-205ENST00000395636 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
PHACTR3-205ENST00000395636 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
PHACTR3-205ENST00000395636 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
PHACTR3-205ENST00000395636 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
PHACTR3-205ENST00000395636 C9orf84Q5VXU9 1444 aa16.89■□□□□ 0.29
PHACTR3-205ENST00000395636 ADGBQ8N7X0 1667 aa16.89■□□□□ 0.29
PHACTR3-205ENST00000395636 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
PHACTR3-205ENST00000395636 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
PHACTR3-205ENST00000395636 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
PHACTR3-205ENST00000395636 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 FOXD1Q16676 465 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 ABCA9Q8IUA7 1624 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 EFCAB2Q5VUJ9 269 aa16.86■□□□□ 0.29
PHACTR3-205ENST00000395636 CCDC141Q6ZP82 1450 aa16.85■□□□□ 0.29
PHACTR3-205ENST00000395636 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
PHACTR3-205ENST00000395636 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
PHACTR3-205ENST00000395636 SHANK2Q9UPX8 1470 aa16.83■□□□□ 0.28
PHACTR3-205ENST00000395636 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
PHACTR3-205ENST00000395636 ABCC1P33527 1531 aa16.82■□□□□ 0.28
PHACTR3-205ENST00000395636 FANCAO15360 1455 aa16.81■□□□□ 0.28
PHACTR3-205ENST00000395636 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
PHACTR3-205ENST00000395636 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
PHACTR3-205ENST00000395636 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
PHACTR3-205ENST00000395636 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
PHACTR3-205ENST00000395636 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
PHACTR3-205ENST00000395636 PLEKHH2Q8IVE3 1493 aa16.77■□□□□ 0.27
PHACTR3-205ENST00000395636 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
PHACTR3-205ENST00000395636 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
PHACTR3-205ENST00000395636 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
PHACTR3-205ENST00000395636 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
PHACTR3-205ENST00000395636 PZPP20742 1482 aa16.75■□□□□ 0.27
PHACTR3-205ENST00000395636 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
PHACTR3-205ENST00000395636 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
PHACTR3-205ENST00000395636 MAST1Q9Y2H9 1570 aa16.73■□□□□ 0.27
PHACTR3-205ENST00000395636 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
PHACTR3-205ENST00000395636 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
PHACTR3-205ENST00000395636 NUP155O75694 1391 aa16.71■□□□□ 0.26
PHACTR3-205ENST00000395636 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
PHACTR3-205ENST00000395636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
PHACTR3-205ENST00000395636 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
PHACTR3-205ENST00000395636 ZFYVE16Q7Z3T8 1539 aa16.68■□□□□ 0.26
PHACTR3-205ENST00000395636 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
PHACTR3-205ENST00000395636 PKD2Q13563 968 aa16.67■□□□□ 0.26
PHACTR3-205ENST00000395636 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
PHACTR3-205ENST00000395636 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
PHACTR3-205ENST00000395636 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
PHACTR3-205ENST00000395636 MAP3K4Q9Y6R4 1608 aa16.65■□□□□ 0.26
PHACTR3-205ENST00000395636 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
PHACTR3-205ENST00000395636 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
PHACTR3-205ENST00000395636 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
PHACTR3-205ENST00000395636 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
PHACTR3-205ENST00000395636 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms