RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ROCK1Q13464 1354 aa26.8■■□□□ 1.88
SIL1-202ENST00000394817 RRP7BPQ9NSQ0 103 aa26.78■■□□□ 1.88
SIL1-202ENST00000394817 CHIC2Q9UKJ5 165 aa26.77■■□□□ 1.88
SIL1-202ENST00000394817 ABCC2Q92887 1545 aa26.76■■□□□ 1.87
SIL1-202ENST00000394817 ABCC5O15440 1437 aa26.76■■□□□ 1.87
SIL1-202ENST00000394817 PPP1R15AO75807 674 aaPredicted RBP26.75■■□□□ 1.87
SIL1-202ENST00000394817 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
SIL1-202ENST00000394817 TONSLQ96HA7 1378 aa26.74■■□□□ 1.87
SIL1-202ENST00000394817 PLEKHD1A6NEE1 506 aa26.74■■□□□ 1.87
SIL1-202ENST00000394817 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
SIL1-202ENST00000394817 ADGBQ8N7X0 1667 aa26.73■■□□□ 1.87
SIL1-202ENST00000394817 CAMSAP2Q08AD1 1489 aa26.73■■□□□ 1.87
SIL1-202ENST00000394817 GPATCH8Q9UKJ3 1502 aaKnown RBP26.72■■□□□ 1.87
SIL1-202ENST00000394817 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
SIL1-202ENST00000394817 KDM5BQ9UGL1 1544 aa26.69■■□□□ 1.86
SIL1-202ENST00000394817 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
SIL1-202ENST00000394817 ZNF644Q9H582 1327 aaPredicted RBP26.68■■□□□ 1.86
SIL1-202ENST00000394817 YTHDC1Q96MU7 727 aaKnown RBP26.67■■□□□ 1.86
SIL1-202ENST00000394817 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
SIL1-202ENST00000394817 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
SIL1-202ENST00000394817 UHRF1BP1LA0JNW5 1464 aa26.62■■□□□ 1.85
SIL1-202ENST00000394817 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
SIL1-202ENST00000394817 ADGRL2O95490 1459 aa26.61■■□□□ 1.85
SIL1-202ENST00000394817 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
SIL1-202ENST00000394817 MPHOSPH9Q99550 1183 aa26.57■■□□□ 1.84
SIL1-202ENST00000394817 ZNF777Q9ULD5 760 aaPredicted RBP26.55■■□□□ 1.84
SIL1-202ENST00000394817 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
SIL1-202ENST00000394817 GTF3C3Q9Y5Q9 886 aa26.54■■□□□ 1.84
SIL1-202ENST00000394817 TTC37Q6PGP7 1564 aa26.54■■□□□ 1.84
SIL1-202ENST00000394817 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
SIL1-202ENST00000394817 CDC42BPBQ9Y5S2 1711 aa26.51■■□□□ 1.84
SIL1-202ENST00000394817 PREX2Q70Z35 1606 aa26.51■■□□□ 1.83
SIL1-202ENST00000394817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
SIL1-202ENST00000394817 ANKRD30BQ9BXX2 1392 aa26.46■■□□□ 1.83
SIL1-202ENST00000394817 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
SIL1-202ENST00000394817 PZPP20742 1482 aa26.45■■□□□ 1.82
SIL1-202ENST00000394817 ARHGEF5Q12774 1597 aa26.45■■□□□ 1.82
SIL1-202ENST00000394817 ANKRD30AQ9BXX3 1397 aa26.44■■□□□ 1.82
SIL1-202ENST00000394817 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
SIL1-202ENST00000394817 KCNH8Q96L42 1107 aa26.43■■□□□ 1.82
SIL1-202ENST00000394817 MYO5CQ9NQX4 1742 aa26.43■■□□□ 1.82
SIL1-202ENST00000394817 DDX10Q13206 875 aaKnown RBP26.41■■□□□ 1.82
SIL1-202ENST00000394817 TEX14Q8IWB6 1497 aa26.39■■□□□ 1.82
SIL1-202ENST00000394817 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
SIL1-202ENST00000394817 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
SIL1-202ENST00000394817 HIRIP3Q9BW71 556 aaPredicted RBP26.37■■□□□ 1.81
SIL1-202ENST00000394817 FOXD1Q16676 465 aa26.37■■□□□ 1.81
SIL1-202ENST00000394817 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
SIL1-202ENST00000394817 ANKRD50Q9ULJ7 1429 aa26.35■■□□□ 1.81
SIL1-202ENST00000394817 MBD5Q9P267 1494 aa26.34■■□□□ 1.81
SIL1-202ENST00000394817 HNRNPMP52272 730 aaKnown RBP eCLIP26.33■■□□□ 1.811e-6■■■■□ 26.2
SIL1-202ENST00000394817 KDM5DQ9BY66 1539 aa26.32■■□□□ 1.8
SIL1-202ENST00000394817 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
SIL1-202ENST00000394817 L3MBTL2Q969R5 705 aa26.31■■□□□ 1.8
SIL1-202ENST00000394817 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
SIL1-202ENST00000394817 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
SIL1-202ENST00000394817 CCDC141Q6ZP82 1450 aa26.3■■□□□ 1.8
SIL1-202ENST00000394817 PLCH2O75038 1416 aa26.26■■□□□ 1.8
SIL1-202ENST00000394817 MAST1Q9Y2H9 1570 aa26.25■■□□□ 1.79
SIL1-202ENST00000394817 ASXL2Q76L83 1435 aa26.25■■□□□ 1.79
SIL1-202ENST00000394817 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
SIL1-202ENST00000394817 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
SIL1-202ENST00000394817 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
SIL1-202ENST00000394817 HSPA5P11021 654 aaKnown RBP26.22■■□□□ 1.79
SIL1-202ENST00000394817 POLR1AO95602 1720 aaPredicted RBP26.21■■□□□ 1.79
SIL1-202ENST00000394817 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.79
SIL1-202ENST00000394817 EIF4G2P78344 907 aaKnown RBP eCLIP26.2■■□□□ 1.795e-8■■■□□ 18.8
SIL1-202ENST00000394817 ABCA9Q8IUA7 1624 aa26.2■■□□□ 1.78
SIL1-202ENST00000394817 RSPH4AQ5TD94 716 aa26.2■■□□□ 1.78
SIL1-202ENST00000394817 CCER2I3L3R5 266 aa26.19■■□□□ 1.78
SIL1-202ENST00000394817 ANP32CO43423 234 aa26.18■■□□□ 1.78
SIL1-202ENST00000394817 PLEKHH2Q8IVE3 1493 aa26.18■■□□□ 1.78
SIL1-202ENST00000394817 ABCC1P33527 1531 aa26.17■■□□□ 1.78
SIL1-202ENST00000394817 PKD2Q13563 968 aa26.16■■□□□ 1.78
SIL1-202ENST00000394817 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
SIL1-202ENST00000394817 NUP155O75694 1391 aa26.16■■□□□ 1.78
SIL1-202ENST00000394817 NBPF8Q3BBV2 869 aa26.15■■□□□ 1.78
SIL1-202ENST00000394817 EFCAB2Q5VUJ9 269 aa26.15■■□□□ 1.78
SIL1-202ENST00000394817 ARAP3Q8WWN8 1544 aa26.15■■□□□ 1.78
SIL1-202ENST00000394817 NPM1P06748 294 aaKnown RBP eCLIP26.14■■□□□ 1.78
SIL1-202ENST00000394817 WASHC2AQ641Q2 1341 aa26.13■■□□□ 1.77
SIL1-202ENST00000394817 RIMBP3CA6NJZ7 1639 aa26.12■■□□□ 1.77
SIL1-202ENST00000394817 RIMBP3BA6NNM3 1639 aa26.12■■□□□ 1.77
SIL1-202ENST00000394817 RIMBP3Q9UFD9 1639 aa26.12■■□□□ 1.77
SIL1-202ENST00000394817 UNC13BO14795 1591 aa26.12■■□□□ 1.77
SIL1-202ENST00000394817 SPATA31E1Q6ZUB1 1445 aa26.1■■□□□ 1.77
SIL1-202ENST00000394817 FAM135AQ9P2D6 1515 aa26.08■■□□□ 1.77
SIL1-202ENST00000394817 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.76
SIL1-202ENST00000394817 FANCAO15360 1455 aa26.07■■□□□ 1.76
SIL1-202ENST00000394817 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
SIL1-202ENST00000394817 CCDC7Q96M83 1385 aa26.03■■□□□ 1.76
SIL1-202ENST00000394817 UHRF1BP1Q6BDS2 1440 aa26.03■■□□□ 1.76
SIL1-202ENST00000394817 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
SIL1-202ENST00000394817 IQGAP3Q86VI3 1631 aa26.02■■□□□ 1.76
SIL1-202ENST00000394817 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
SIL1-202ENST00000394817 KDM5CP41229 1560 aa25.99■■□□□ 1.75
SIL1-202ENST00000394817 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
SIL1-202ENST00000394817 ADGRL1O94910 1474 aa25.96■■□□□ 1.75
SIL1-202ENST00000394817 MAGI2Q86UL8 1455 aa25.96■■□□□ 1.75
SIL1-202ENST00000394817 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms