RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 CEP162Q5TB80 1403 aa25.98■■□□□ 1.75
TGFA-202ENST00000394241 ILDR2Q71H61 639 aa25.98■■□□□ 1.75
TGFA-202ENST00000394241 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
TGFA-202ENST00000394241 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
TGFA-202ENST00000394241 SOCS7O14512 581 aa25.96■■□□□ 1.75
TGFA-202ENST00000394241 MAGI2Q86UL8 1455 aa25.94■■□□□ 1.74
TGFA-202ENST00000394241 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
TGFA-202ENST00000394241 MLECQ14165 292 aa25.94■■□□□ 1.74
TGFA-202ENST00000394241 FMN1Q68DA7 1419 aa25.94■■□□□ 1.74
TGFA-202ENST00000394241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.93■■□□□ 1.74
TGFA-202ENST00000394241 PREX1Q8TCU6 1659 aa25.91■■□□□ 1.74
TGFA-202ENST00000394241 HECW1Q76N89 1606 aa25.9■■□□□ 1.74
TGFA-202ENST00000394241 ARHGEF12Q9NZN5 1544 aa25.85■■□□□ 1.73
TGFA-202ENST00000394241 STRCQ7RTU9 1775 aa25.83■■□□□ 1.73
TGFA-202ENST00000394241 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
TGFA-202ENST00000394241 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
TGFA-202ENST00000394241 SPATA31D1Q6ZQQ2 1576 aa25.8■■□□□ 1.72
TGFA-202ENST00000394241 ATP10AO60312 1499 aa25.79■■□□□ 1.72
TGFA-202ENST00000394241 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
TGFA-202ENST00000394241 CEBPAP49715 358 aaPredicted RBP25.77■■□□□ 1.72
TGFA-202ENST00000394241 PLCH2O75038 1416 aa25.75■■□□□ 1.71
TGFA-202ENST00000394241 CASKIN1Q8WXD9 1431 aa25.75■■□□□ 1.71
TGFA-202ENST00000394241 SETD1BQ9UPS6 1966 aaKnown RBP25.75■■□□□ 1.71
TGFA-202ENST00000394241 FYCO1Q9BQS8 1478 aa25.74■■□□□ 1.71
TGFA-202ENST00000394241 UHRF1BP1Q6BDS2 1440 aa25.74■■□□□ 1.71
TGFA-202ENST00000394241 CDK13Q14004 1512 aaKnown RBP25.7■■□□□ 1.7
TGFA-202ENST00000394241 ATP1B4Q9UN42 357 aaPredicted RBP25.69■■□□□ 1.7
TGFA-202ENST00000394241 PTPRTO14522 1441 aa25.67■■□□□ 1.7
TGFA-202ENST00000394241 LRRIQ1Q96JM4 1722 aa25.67■■□□□ 1.7
TGFA-202ENST00000394241 MYO5CQ9NQX4 1742 aa25.67■■□□□ 1.7
TGFA-202ENST00000394241 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
TGFA-202ENST00000394241 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
TGFA-202ENST00000394241 EFCAB2Q5VUJ9 269 aa25.64■■□□□ 1.7
TGFA-202ENST00000394241 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
TGFA-202ENST00000394241 LTBP4Q8N2S1 1624 aa25.61■■□□□ 1.69
TGFA-202ENST00000394241 C3P01024 1663 aa25.6■■□□□ 1.69
TGFA-202ENST00000394241 KDM5CP41229 1560 aa25.6■■□□□ 1.69
TGFA-202ENST00000394241 IQSEC2Q5JU85 1478 aa25.59■■□□□ 1.69
TGFA-202ENST00000394241 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
TGFA-202ENST00000394241 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
TGFA-202ENST00000394241 AFAP1Q8N556 730 aa25.55■■□□□ 1.68
TGFA-202ENST00000394241 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
TGFA-202ENST00000394241 KIF14Q15058 1648 aa25.53■■□□□ 1.68
TGFA-202ENST00000394241 CDK11AQ9UQ88 783 aaPredicted RBP25.53■■□□□ 1.68
TGFA-202ENST00000394241 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
TGFA-202ENST00000394241 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
TGFA-202ENST00000394241 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
TGFA-202ENST00000394241 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
TGFA-202ENST00000394241 ESF1Q9H501 851 aaKnown RBP25.5■■□□□ 1.67
TGFA-202ENST00000394241 TROQ12816 1431 aaPredicted RBP25.47■■□□□ 1.67
TGFA-202ENST00000394241 AGLP35573 1532 aa25.47■■□□□ 1.67
TGFA-202ENST00000394241 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
TGFA-202ENST00000394241 TIAM1Q13009 1591 aa25.45■■□□□ 1.66
TGFA-202ENST00000394241 CNTLNQ9NXG0 1405 aa25.42■■□□□ 1.66
TGFA-202ENST00000394241 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
TGFA-202ENST00000394241 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
TGFA-202ENST00000394241 MAP3K1Q13233 1512 aa25.4■■□□□ 1.66
TGFA-202ENST00000394241 EHBP1L1Q8N3D4 1523 aa25.4■■□□□ 1.66
TGFA-202ENST00000394241 MTUS2Q5JR59 1369 aa25.38■■□□□ 1.65
TGFA-202ENST00000394241 UBAP1LF5GYI3 381 aa25.36■■□□□ 1.65
TGFA-202ENST00000394241 ABCC1P33527 1531 aa25.36■■□□□ 1.65
TGFA-202ENST00000394241 NPATQ14207 1427 aa25.36■■□□□ 1.65
TGFA-202ENST00000394241 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
TGFA-202ENST00000394241 KIDINS220Q9ULH0 1771 aa25.35■■□□□ 1.65
TGFA-202ENST00000394241 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
TGFA-202ENST00000394241 ZNF335Q9H4Z2 1342 aaPredicted RBP25.35■■□□□ 1.65
TGFA-202ENST00000394241 PREX2Q70Z35 1606 aa25.34■■□□□ 1.65
TGFA-202ENST00000394241 APLP2Q06481 763 aa25.32■■□□□ 1.64
TGFA-202ENST00000394241 NCKAP5LQ9HCH0 1330 aa25.32■■□□□ 1.64
TGFA-202ENST00000394241 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
TGFA-202ENST00000394241 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
TGFA-202ENST00000394241 ZMYM3Q14202 1370 aa25.27■■□□□ 1.64
TGFA-202ENST00000394241 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
TGFA-202ENST00000394241 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
TGFA-202ENST00000394241 PKD2Q13563 968 aa25.25■■□□□ 1.63
TGFA-202ENST00000394241 MYO3AQ8NEV4 1616 aa25.24■■□□□ 1.63
TGFA-202ENST00000394241 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
TGFA-202ENST00000394241 SAMD9LQ8IVG5 1584 aa25.22■■□□□ 1.63
TGFA-202ENST00000394241 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
TGFA-202ENST00000394241 CLTCQ00610 1675 aaKnown RBP25.21■■□□□ 1.63
TGFA-202ENST00000394241 CEP170BQ9Y4F5 1589 aaPredicted RBP25.21■■□□□ 1.63
TGFA-202ENST00000394241 NCOA2Q15596 1464 aa25.2■■□□□ 1.62
TGFA-202ENST00000394241 MED1Q15648 1581 aaPredicted RBP25.19■■□□□ 1.62
TGFA-202ENST00000394241 KANK4Q5T7N3 995 aaPredicted RBP25.19■■□□□ 1.62
TGFA-202ENST00000394241 CCNB3Q8WWL7 1395 aa25.18■■□□□ 1.62
TGFA-202ENST00000394241 PPP6R1Q9UPN7 881 aa25.16■■□□□ 1.62
TGFA-202ENST00000394241 GPATCH8Q9UKJ3 1502 aaKnown RBP25.15■■□□□ 1.62
TGFA-202ENST00000394241 PTPRKQ15262 1439 aa25.14■■□□□ 1.62
TGFA-202ENST00000394241 HSPA1LP34931 641 aa25.14■■□□□ 1.62
TGFA-202ENST00000394241 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
TGFA-202ENST00000394241 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
TGFA-202ENST00000394241 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
TGFA-202ENST00000394241 PLXNC1O60486 1568 aa25.11■■□□□ 1.61
TGFA-202ENST00000394241 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
TGFA-202ENST00000394241 ATP7AQ04656 1500 aa25.11■■□□□ 1.61
TGFA-202ENST00000394241 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
TGFA-202ENST00000394241 A2MP01023 1474 aa25.08■■□□□ 1.6
TGFA-202ENST00000394241 INO80Q9ULG1 1556 aaPredicted RBP25.07■■□□□ 1.6
TGFA-202ENST00000394241 TOM1O60784 492 aa25.07■■□□□ 1.6
TGFA-202ENST00000394241 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms