RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
NKIRAS2-203ENST00000393879 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
NKIRAS2-203ENST00000393879 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
NKIRAS2-203ENST00000393879 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
NKIRAS2-203ENST00000393879 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
NKIRAS2-203ENST00000393879 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
NKIRAS2-203ENST00000393879 NUP155O75694 1391 aa13.47□□□□□ -0.25
NKIRAS2-203ENST00000393879 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.25
NKIRAS2-203ENST00000393879 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
NKIRAS2-203ENST00000393879 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
NKIRAS2-203ENST00000393879 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
NKIRAS2-203ENST00000393879 NAIPQ13075 1403 aa13.45□□□□□ -0.26
NKIRAS2-203ENST00000393879 PTPRGP23470 1445 aa13.44□□□□□ -0.26
NKIRAS2-203ENST00000393879 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
NKIRAS2-203ENST00000393879 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
NKIRAS2-203ENST00000393879 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
NKIRAS2-203ENST00000393879 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
NKIRAS2-203ENST00000393879 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
NKIRAS2-203ENST00000393879 PTPN23Q9H3S7 1636 aa13.4□□□□□ -0.26
NKIRAS2-203ENST00000393879 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
NKIRAS2-203ENST00000393879 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
NKIRAS2-203ENST00000393879 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
NKIRAS2-203ENST00000393879 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
NKIRAS2-203ENST00000393879 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
NKIRAS2-203ENST00000393879 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
NKIRAS2-203ENST00000393879 TROQ12816 1431 aaPredicted RBP13.38□□□□□ -0.27
NKIRAS2-203ENST00000393879 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
NKIRAS2-203ENST00000393879 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
NKIRAS2-203ENST00000393879 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
NKIRAS2-203ENST00000393879 DAPK1P53355 1430 aa13.35□□□□□ -0.27
NKIRAS2-203ENST00000393879 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
NKIRAS2-203ENST00000393879 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
NKIRAS2-203ENST00000393879 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
NKIRAS2-203ENST00000393879 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
NKIRAS2-203ENST00000393879 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
NKIRAS2-203ENST00000393879 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
NKIRAS2-203ENST00000393879 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
NKIRAS2-203ENST00000393879 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
NKIRAS2-203ENST00000393879 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
NKIRAS2-203ENST00000393879 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
NKIRAS2-203ENST00000393879 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
NKIRAS2-203ENST00000393879 ABCC5O15440 1437 aa13.28□□□□□ -0.28
NKIRAS2-203ENST00000393879 PRKRIP1Q9H875 184 aaPredicted RBP13.28□□□□□ -0.28
NKIRAS2-203ENST00000393879 USP47Q96K76 1375 aa13.27□□□□□ -0.29
NKIRAS2-203ENST00000393879 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
NKIRAS2-203ENST00000393879 CCDC136Q96JN2 1154 aa13.27□□□□□ -0.29
NKIRAS2-203ENST00000393879 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
NKIRAS2-203ENST00000393879 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 TMF1P82094 1093 aa13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 KANK1Q14678 1352 aa13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 AKNAQ7Z591 1439 aa13.25□□□□□ -0.29
NKIRAS2-203ENST00000393879 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
NKIRAS2-203ENST00000393879 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
NKIRAS2-203ENST00000393879 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
NKIRAS2-203ENST00000393879 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
NKIRAS2-203ENST00000393879 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
NKIRAS2-203ENST00000393879 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
NKIRAS2-203ENST00000393879 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
NKIRAS2-203ENST00000393879 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
NKIRAS2-203ENST00000393879 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
NKIRAS2-203ENST00000393879 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
NKIRAS2-203ENST00000393879 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.3
NKIRAS2-203ENST00000393879 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
NKIRAS2-203ENST00000393879 ARHGAP5Q13017 1502 aa13.19□□□□□ -0.3
NKIRAS2-203ENST00000393879 KIF3BO15066 747 aa13.19□□□□□ -0.3
NKIRAS2-203ENST00000393879 RALBP1Q15311 655 aa13.19□□□□□ -0.3
NKIRAS2-203ENST00000393879 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
NKIRAS2-203ENST00000393879 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
NKIRAS2-203ENST00000393879 NUP160Q12769 1436 aa13.18□□□□□ -0.3
NKIRAS2-203ENST00000393879 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
NKIRAS2-203ENST00000393879 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
NKIRAS2-203ENST00000393879 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
NKIRAS2-203ENST00000393879 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
NKIRAS2-203ENST00000393879 KIF14Q15058 1648 aa13.16□□□□□ -0.3
NKIRAS2-203ENST00000393879 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
NKIRAS2-203ENST00000393879 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
NKIRAS2-203ENST00000393879 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
NKIRAS2-203ENST00000393879 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
NKIRAS2-203ENST00000393879 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.31
NKIRAS2-203ENST00000393879 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.31
NKIRAS2-203ENST00000393879 ANP32AP39687 249 aaKnown RBP13.14□□□□□ -0.31
NKIRAS2-203ENST00000393879 CHD1O14646 1710 aa13.14□□□□□ -0.31
NKIRAS2-203ENST00000393879 GGT6Q6P531 493 aa13.14□□□□□ -0.31
NKIRAS2-203ENST00000393879 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
NKIRAS2-203ENST00000393879 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
NKIRAS2-203ENST00000393879 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
NKIRAS2-203ENST00000393879 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
NKIRAS2-203ENST00000393879 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
NKIRAS2-203ENST00000393879 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
NKIRAS2-203ENST00000393879 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
NKIRAS2-203ENST00000393879 ATP10BO94823 1461 aa13.12□□□□□ -0.31
NKIRAS2-203ENST00000393879 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms