RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
UBTF-203ENST00000393606 PRG4Q92954 1404 aaPredicted RBP27.13■■□□□ 1.93
UBTF-203ENST00000393606 CCER2I3L3R5 266 aa27.12■■□□□ 1.93
UBTF-203ENST00000393606 EIF4G3O43432 1585 aaKnown RBP27.12■■□□□ 1.93
UBTF-203ENST00000393606 GCC2Q8IWJ2 1684 aa27.12■■□□□ 1.93
UBTF-203ENST00000393606 SLC4A1APQ9BWU0 796 aaKnown RBP27.12■■□□□ 1.93
UBTF-203ENST00000393606 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
UBTF-203ENST00000393606 DAPK1P53355 1430 aa27.11■■□□□ 1.93
UBTF-203ENST00000393606 WASHC2AQ641Q2 1341 aa27.11■■□□□ 1.93
UBTF-203ENST00000393606 CFDP1Q9UEE9 299 aaPredicted RBP27.09■■□□□ 1.93
UBTF-203ENST00000393606 PLB1Q6P1J6 1458 aa27.08■■□□□ 1.93
UBTF-203ENST00000393606 ABCC5O15440 1437 aa27.08■■□□□ 1.93
UBTF-203ENST00000393606 EIF4G2P78344 907 aaKnown RBP eCLIP27.07■■□□□ 1.92
UBTF-203ENST00000393606 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
UBTF-203ENST00000393606 RAPGEF6Q8TEU7 1601 aa27.05■■□□□ 1.92
UBTF-203ENST00000393606 NEFLP07196 543 aa27.04■■□□□ 1.92
UBTF-203ENST00000393606 C11orf95C9JLR9 678 aaPredicted RBP27.03■■□□□ 1.92
UBTF-203ENST00000393606 NBPF8Q3BBV2 869 aa27.03■■□□□ 1.92
UBTF-203ENST00000393606 ZNF326Q5BKZ1 582 aaKnown RBP27.01■■□□□ 1.91
UBTF-203ENST00000393606 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
UBTF-203ENST00000393606 HNRNPUQ00839 825 aaKnown RBP eCLIP27■■□□□ 1.91
UBTF-203ENST00000393606 AKNAQ7Z591 1439 aa27■■□□□ 1.91
UBTF-203ENST00000393606 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
UBTF-203ENST00000393606 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
UBTF-203ENST00000393606 CCDC184Q52MB2 194 aa26.95■■□□□ 1.9
UBTF-203ENST00000393606 POLR3GLQ9BT43 218 aa26.94■■□□□ 1.9
UBTF-203ENST00000393606 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
UBTF-203ENST00000393606 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
UBTF-203ENST00000393606 ROCK1Q13464 1354 aa26.92■■□□□ 1.9
UBTF-203ENST00000393606 CAMSAP2Q08AD1 1489 aa26.91■■□□□ 1.9
UBTF-203ENST00000393606 KIF14Q15058 1648 aa26.91■■□□□ 1.9
UBTF-203ENST00000393606 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
UBTF-203ENST00000393606 IRX6P78412 446 aaPredicted RBP26.89■■□□□ 1.9
UBTF-203ENST00000393606 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
UBTF-203ENST00000393606 RBM19Q9Y4C8 960 aaKnown RBP26.87■■□□□ 1.89
UBTF-203ENST00000393606 GPATCH8Q9UKJ3 1502 aaKnown RBP26.87■■□□□ 1.89
UBTF-203ENST00000393606 PLEKHD1A6NEE1 506 aa26.86■■□□□ 1.89
UBTF-203ENST00000393606 RPRD2Q5VT52 1461 aaKnown RBP26.86■■□□□ 1.89
UBTF-203ENST00000393606 PKD2Q13563 968 aa26.86■■□□□ 1.89
UBTF-203ENST00000393606 FAM9BQ8IZU0 186 aa26.86■■□□□ 1.89
UBTF-203ENST00000393606 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
UBTF-203ENST00000393606 NCOA1Q15788 1441 aa26.83■■□□□ 1.89
UBTF-203ENST00000393606 CCDC7Q96M83 1385 aa26.81■■□□□ 1.88
UBTF-203ENST00000393606 PZPP20742 1482 aa26.79■■□□□ 1.88
UBTF-203ENST00000393606 TEX14Q8IWB6 1497 aa26.79■■□□□ 1.88
UBTF-203ENST00000393606 HNRNPMP52272 730 aaKnown RBP eCLIP26.79■■□□□ 1.88
UBTF-203ENST00000393606 CNTLNQ9NXG0 1405 aa26.79■■□□□ 1.88
UBTF-203ENST00000393606 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
UBTF-203ENST00000393606 PRKRIP1Q9H875 184 aaPredicted RBP26.76■■□□□ 1.87
UBTF-203ENST00000393606 MRS2Q9HD23 443 aa26.76■■□□□ 1.87
UBTF-203ENST00000393606 SENP3-EIF4A1A0A087X0R7 540 aa26.75■■□□□ 1.87
UBTF-203ENST00000393606 KDM2AQ9Y2K7 1162 aa26.74■■□□□ 1.87
UBTF-203ENST00000393606 PRKCSHP14314 528 aaPredicted RBP26.74■■□□□ 1.87
UBTF-203ENST00000393606 ANKRD30AQ9BXX3 1397 aa26.74■■□□□ 1.87
UBTF-203ENST00000393606 NUP160Q12769 1436 aa26.72■■□□□ 1.87
UBTF-203ENST00000393606 NUP155O75694 1391 aa26.71■■□□□ 1.87
UBTF-203ENST00000393606 ITSN2Q9NZM3 1697 aa26.71■■□□□ 1.87
UBTF-203ENST00000393606 ATP10BO94823 1461 aa26.71■■□□□ 1.87
UBTF-203ENST00000393606 TSPY4P0CV99 314 aa26.7■■□□□ 1.86
UBTF-203ENST00000393606 TSPY10P0CW01 314 aa26.7■■□□□ 1.86
UBTF-203ENST00000393606 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
UBTF-203ENST00000393606 KIAA1107Q9UPP5 1409 aa26.68■■□□□ 1.86
UBTF-203ENST00000393606 ADGBQ8N7X0 1667 aa26.63■■□□□ 1.85
UBTF-203ENST00000393606 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
UBTF-203ENST00000393606 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
UBTF-203ENST00000393606 MSH5O43196 834 aa26.62■■□□□ 1.85
UBTF-203ENST00000393606 USP47Q96K76 1375 aa26.61■■□□□ 1.85
UBTF-203ENST00000393606 CDC42BPAQ5VT25 1732 aa26.61■■□□□ 1.85
UBTF-203ENST00000393606 ADCY10Q96PN6 1610 aa26.6■■□□□ 1.85
UBTF-203ENST00000393606 PTPRGP23470 1445 aa26.6■■□□□ 1.85
UBTF-203ENST00000393606 ABCA8O94911 1581 aa26.58■■□□□ 1.85
UBTF-203ENST00000393606 ADGRL2O95490 1459 aa26.58■■□□□ 1.85
UBTF-203ENST00000393606 CROCC2H7BZ55 1655 aa26.58■■□□□ 1.85
UBTF-203ENST00000393606 DCAF11Q8TEB1 546 aa26.58■■□□□ 1.85
UBTF-203ENST00000393606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.58■■□□□ 1.852e-7■■■■□ 23.5
UBTF-203ENST00000393606 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
UBTF-203ENST00000393606 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
UBTF-203ENST00000393606 KIF15Q9NS87 1388 aa26.55■■□□□ 1.84
UBTF-203ENST00000393606 RGL3Q3MIN7 710 aa26.52■■□□□ 1.84
UBTF-203ENST00000393606 BCORL1Q5H9F3 1711 aa26.49■■□□□ 1.83
UBTF-203ENST00000393606 MBD5Q9P267 1494 aa26.48■■□□□ 1.83
UBTF-203ENST00000393606 ST20-MTHFSA0A0A6YYL1 179 aa26.48■■□□□ 1.83
UBTF-203ENST00000393606 DHX29Q7Z478 1369 aaKnown RBP26.43■■□□□ 1.82
UBTF-203ENST00000393606 ZBED9Q6R2W3 1325 aa26.4■■□□□ 1.82
UBTF-203ENST00000393606 SHANK2Q9UPX8 1470 aa26.38■■□□□ 1.81
UBTF-203ENST00000393606 PPP4R2Q9NY27 417 aa26.38■■□□□ 1.81
UBTF-203ENST00000393606 SAMD9LQ8IVG5 1584 aa26.38■■□□□ 1.81
UBTF-203ENST00000393606 KDM5CP41229 1560 aa26.37■■□□□ 1.81
UBTF-203ENST00000393606 B4GALNT3Q6L9W6 998 aa26.37■■□□□ 1.81
UBTF-203ENST00000393606 POLR1AO95602 1720 aaPredicted RBP26.36■■□□□ 1.81
UBTF-203ENST00000393606 CDC42BPBQ9Y5S2 1711 aa26.36■■□□□ 1.81
UBTF-203ENST00000393606 ROCK2O75116 1388 aaKnown RBP26.35■■□□□ 1.81
UBTF-203ENST00000393606 CCDC141Q6ZP82 1450 aa26.35■■□□□ 1.81
UBTF-203ENST00000393606 FANCIQ9NVI1 1328 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 NBPF1Q3BBV0 1214 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 TMC1Q8TDI8 760 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 CHD1O14646 1710 aa26.34■■□□□ 1.81
UBTF-203ENST00000393606 SYCP2Q9BX26 1530 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms