RNA–Protein interactions for RNA: ENST00000393605.7

ARAP1-203, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARAP1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-203ENST00000393605 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
ARAP1-203ENST00000393605 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
ARAP1-203ENST00000393605 HDGFP51858 240 aaKnown RBP19.47■□□□□ 0.71
ARAP1-203ENST00000393605 L3MBTL2Q969R5 705 aa19.47■□□□□ 0.71
ARAP1-203ENST00000393605 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
ARAP1-203ENST00000393605 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
ARAP1-203ENST00000393605 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
ARAP1-203ENST00000393605 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
ARAP1-203ENST00000393605 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
ARAP1-203ENST00000393605 NBR1Q14596 966 aa19.41■□□□□ 0.7
ARAP1-203ENST00000393605 ANP32BQ92688 251 aaKnown RBP19.41■□□□□ 0.7
ARAP1-203ENST00000393605 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
ARAP1-203ENST00000393605 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
ARAP1-203ENST00000393605 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
ARAP1-203ENST00000393605 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
ARAP1-203ENST00000393605 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
ARAP1-203ENST00000393605 ARXQ96QS3 562 aa19.39■□□□□ 0.69
ARAP1-203ENST00000393605 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
ARAP1-203ENST00000393605 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
ARAP1-203ENST00000393605 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
ARAP1-203ENST00000393605 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
ARAP1-203ENST00000393605 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
ARAP1-203ENST00000393605 NUDCQ9Y266 331 aa19.35■□□□□ 0.69
ARAP1-203ENST00000393605 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
ARAP1-203ENST00000393605 CUX1P39880 1505 aa19.34■□□□□ 0.69
ARAP1-203ENST00000393605 MORC1Q86VD1 984 aa19.32■□□□□ 0.68
ARAP1-203ENST00000393605 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
ARAP1-203ENST00000393605 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
ARAP1-203ENST00000393605 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
ARAP1-203ENST00000393605 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
ARAP1-203ENST00000393605 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
ARAP1-203ENST00000393605 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
ARAP1-203ENST00000393605 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
ARAP1-203ENST00000393605 KIF21BO75037 1637 aa19.26■□□□□ 0.67
ARAP1-203ENST00000393605 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
ARAP1-203ENST00000393605 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
ARAP1-203ENST00000393605 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
ARAP1-203ENST00000393605 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
ARAP1-203ENST00000393605 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
ARAP1-203ENST00000393605 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
ARAP1-203ENST00000393605 HDGFL2Q7Z4V5 671 aaPredicted RBP19.22■□□□□ 0.67
ARAP1-203ENST00000393605 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
ARAP1-203ENST00000393605 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
ARAP1-203ENST00000393605 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
ARAP1-203ENST00000393605 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
ARAP1-203ENST00000393605 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
ARAP1-203ENST00000393605 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
ARAP1-203ENST00000393605 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
ARAP1-203ENST00000393605 KIF15Q9NS87 1388 aa19.17■□□□□ 0.66
ARAP1-203ENST00000393605 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
ARAP1-203ENST00000393605 LRRC9Q6ZRR7 1453 aa19.15■□□□□ 0.66
ARAP1-203ENST00000393605 CASKIN1Q8WXD9 1431 aa19.14■□□□□ 0.66
ARAP1-203ENST00000393605 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
ARAP1-203ENST00000393605 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
ARAP1-203ENST00000393605 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.65
ARAP1-203ENST00000393605 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
ARAP1-203ENST00000393605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.65
ARAP1-203ENST00000393605 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
ARAP1-203ENST00000393605 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
ARAP1-203ENST00000393605 KTN1Q86UP2 1357 aaKnown RBP19.12■□□□□ 0.65
ARAP1-203ENST00000393605 VGFO15240 615 aaPredicted RBP19.09■□□□□ 0.65
ARAP1-203ENST00000393605 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
ARAP1-203ENST00000393605 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
ARAP1-203ENST00000393605 RAPGEF3O95398 923 aa19.08■□□□□ 0.65
ARAP1-203ENST00000393605 MINK1Q8N4C8 1332 aaPredicted RBP19.08■□□□□ 0.65
ARAP1-203ENST00000393605 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
ARAP1-203ENST00000393605 TERF2IPQ9NYB0 399 aa19.06■□□□□ 0.64
ARAP1-203ENST00000393605 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
ARAP1-203ENST00000393605 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
ARAP1-203ENST00000393605 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
ARAP1-203ENST00000393605 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
ARAP1-203ENST00000393605 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
ARAP1-203ENST00000393605 PNNQ9H307 717 aaKnown RBP19.02■□□□□ 0.64
ARAP1-203ENST00000393605 PANK3Q9H999 370 aa19.02■□□□□ 0.64
ARAP1-203ENST00000393605 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
ARAP1-203ENST00000393605 RGS3P49796 1198 aa19.02■□□□□ 0.63
ARAP1-203ENST00000393605 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
ARAP1-203ENST00000393605 RTF1Q92541 710 aaKnown RBP19.01■□□□□ 0.63
ARAP1-203ENST00000393605 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
ARAP1-203ENST00000393605 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
ARAP1-203ENST00000393605 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
ARAP1-203ENST00000393605 NPHP1O15259 732 aa19■□□□□ 0.63
ARAP1-203ENST00000393605 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
ARAP1-203ENST00000393605 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
ARAP1-203ENST00000393605 FYCO1Q9BQS8 1478 aa18.99■□□□□ 0.63
ARAP1-203ENST00000393605 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
ARAP1-203ENST00000393605 B4GALNT3Q6L9W6 998 aa18.99■□□□□ 0.63
ARAP1-203ENST00000393605 RALBP1Q15311 655 aa18.98■□□□□ 0.63
ARAP1-203ENST00000393605 CCDC9Q9Y3X0 531 aaKnown RBP18.98■□□□□ 0.63
ARAP1-203ENST00000393605 KIAA0586Q9BVV6 1533 aa18.96■□□□□ 0.63
ARAP1-203ENST00000393605 USP47Q96K76 1375 aa18.96■□□□□ 0.63
ARAP1-203ENST00000393605 ZNF330Q9Y3S2 320 aaPredicted RBP18.96■□□□□ 0.63
ARAP1-203ENST00000393605 AMPHP49418 695 aa18.96■□□□□ 0.63
ARAP1-203ENST00000393605 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
ARAP1-203ENST00000393605 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
ARAP1-203ENST00000393605 CDK13Q14004 1512 aaKnown RBP18.92■□□□□ 0.62
ARAP1-203ENST00000393605 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
ARAP1-203ENST00000393605 ANP32EQ9BTT0 268 aa18.92■□□□□ 0.62
ARAP1-203ENST00000393605 BECN1Q14457 450 aa18.92■□□□□ 0.62
ARAP1-203ENST00000393605 RRP7AQ9Y3A4 280 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms