RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
SFXN3-202ENST00000393459 EIF5BO60841 1220 aaKnown RBP19.76■□□□□ 0.75
SFXN3-202ENST00000393459 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
SFXN3-202ENST00000393459 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
SFXN3-202ENST00000393459 NEFMP07197 916 aa19.72■□□□□ 0.75
SFXN3-202ENST00000393459 SLC4A3P48751 1232 aa19.72■□□□□ 0.75
SFXN3-202ENST00000393459 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
SFXN3-202ENST00000393459 IPO9Q96P70 1041 aaKnown RBP19.69■□□□□ 0.74
SFXN3-202ENST00000393459 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
SFXN3-202ENST00000393459 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
SFXN3-202ENST00000393459 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
SFXN3-202ENST00000393459 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
SFXN3-202ENST00000393459 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
SFXN3-202ENST00000393459 PTPRKQ15262 1439 aa19.63■□□□□ 0.73
SFXN3-202ENST00000393459 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SFXN3-202ENST00000393459 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
SFXN3-202ENST00000393459 BRPF3Q9ULD4 1205 aa19.61■□□□□ 0.73
SFXN3-202ENST00000393459 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
SFXN3-202ENST00000393459 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
SFXN3-202ENST00000393459 UGGT2Q9NYU1 1516 aa19.6■□□□□ 0.73
SFXN3-202ENST00000393459 PLIN1O60240 522 aa19.6■□□□□ 0.73
SFXN3-202ENST00000393459 EXOC6Q8TAG9 804 aa19.6■□□□□ 0.73
SFXN3-202ENST00000393459 ARXQ96QS3 562 aa19.59■□□□□ 0.73
SFXN3-202ENST00000393459 ZBED9Q6R2W3 1325 aa19.59■□□□□ 0.73
SFXN3-202ENST00000393459 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
SFXN3-202ENST00000393459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
SFXN3-202ENST00000393459 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
SFXN3-202ENST00000393459 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
SFXN3-202ENST00000393459 KIF7Q2M1P5 1343 aa19.55■□□□□ 0.72
SFXN3-202ENST00000393459 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
SFXN3-202ENST00000393459 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
SFXN3-202ENST00000393459 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
SFXN3-202ENST00000393459 HECW1Q76N89 1606 aa19.52■□□□□ 0.72
SFXN3-202ENST00000393459 NUDCQ9Y266 331 aa19.51■□□□□ 0.71
SFXN3-202ENST00000393459 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
SFXN3-202ENST00000393459 LRRIQ1Q96JM4 1722 aa19.5■□□□□ 0.71
SFXN3-202ENST00000393459 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
SFXN3-202ENST00000393459 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
SFXN3-202ENST00000393459 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
SFXN3-202ENST00000393459 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
SFXN3-202ENST00000393459 FGD6Q6ZV73 1430 aa19.48■□□□□ 0.71
SFXN3-202ENST00000393459 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
SFXN3-202ENST00000393459 PDE4AP27815 886 aa19.46■□□□□ 0.71
SFXN3-202ENST00000393459 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
SFXN3-202ENST00000393459 UACAQ9BZF9 1416 aa19.45■□□□□ 0.7
SFXN3-202ENST00000393459 FBLN2P98095 1184 aa19.45■□□□□ 0.7
SFXN3-202ENST00000393459 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
SFXN3-202ENST00000393459 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
SFXN3-202ENST00000393459 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
SFXN3-202ENST00000393459 NCOA2Q15596 1464 aa19.44■□□□□ 0.7
SFXN3-202ENST00000393459 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
SFXN3-202ENST00000393459 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
SFXN3-202ENST00000393459 NUP160Q12769 1436 aa19.43■□□□□ 0.7
SFXN3-202ENST00000393459 NAIPQ13075 1403 aa19.43■□□□□ 0.7
SFXN3-202ENST00000393459 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
SFXN3-202ENST00000393459 DAXXQ9UER7 740 aaPredicted RBP19.41■□□□□ 0.7
SFXN3-202ENST00000393459 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.7
SFXN3-202ENST00000393459 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
SFXN3-202ENST00000393459 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
SFXN3-202ENST00000393459 MAGI3Q5TCQ9 1506 aa19.37■□□□□ 0.69
SFXN3-202ENST00000393459 RGS3P49796 1198 aa19.36■□□□□ 0.69
SFXN3-202ENST00000393459 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
SFXN3-202ENST00000393459 CDK13Q14004 1512 aaKnown RBP19.35■□□□□ 0.69
SFXN3-202ENST00000393459 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
SFXN3-202ENST00000393459 RCAN3Q9UKA8 241 aa19.34■□□□□ 0.69
SFXN3-202ENST00000393459 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
SFXN3-202ENST00000393459 CC2D1BQ5T0F9 858 aaKnown RBP19.33■□□□□ 0.69
SFXN3-202ENST00000393459 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
SFXN3-202ENST00000393459 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
SFXN3-202ENST00000393459 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
SFXN3-202ENST00000393459 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
SFXN3-202ENST00000393459 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
SFXN3-202ENST00000393459 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
SFXN3-202ENST00000393459 NFKBIBQ15653 356 aa19.28■□□□□ 0.68
SFXN3-202ENST00000393459 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
SFXN3-202ENST00000393459 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
SFXN3-202ENST00000393459 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
SFXN3-202ENST00000393459 BACH2Q9BYV9 841 aa19.27■□□□□ 0.68
SFXN3-202ENST00000393459 TCOF1Q13428 1488 aaKnown RBP19.27■□□□□ 0.68
SFXN3-202ENST00000393459 NCOA1Q15788 1441 aa19.27■□□□□ 0.67
SFXN3-202ENST00000393459 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
SFXN3-202ENST00000393459 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
SFXN3-202ENST00000393459 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
SFXN3-202ENST00000393459 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
SFXN3-202ENST00000393459 FRAT2O75474 233 aaPredicted RBP19.24■□□□□ 0.67
SFXN3-202ENST00000393459 GSE1Q14687 1217 aa19.24■□□□□ 0.67
SFXN3-202ENST00000393459 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
SFXN3-202ENST00000393459 KDM6BO15054 1643 aa19.22■□□□□ 0.67
SFXN3-202ENST00000393459 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
SFXN3-202ENST00000393459 TCERG1O14776 1098 aaKnown RBP19.21■□□□□ 0.67
SFXN3-202ENST00000393459 USP47Q96K76 1375 aa19.21■□□□□ 0.67
SFXN3-202ENST00000393459 SPRYD3Q8NCJ5 442 aa19.21■□□□□ 0.67
SFXN3-202ENST00000393459 PKD2Q13563 968 aa19.2■□□□□ 0.66
SFXN3-202ENST00000393459 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
SFXN3-202ENST00000393459 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
SFXN3-202ENST00000393459 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
SFXN3-202ENST00000393459 SLKQ9H2G2 1235 aaPredicted RBP19.18■□□□□ 0.66
SFXN3-202ENST00000393459 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
SFXN3-202ENST00000393459 ARID4BQ4LE39 1312 aaPredicted RBP19.17■□□□□ 0.66
SFXN3-202ENST00000393459 CHD1O14646 1710 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms