RNA–Protein interactions for RNA: ENST00000393308.5

RAB43-205, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-205ENST00000393308 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
RAB43-205ENST00000393308 CHD1O14646 1710 aa17.26■□□□□ 0.35
RAB43-205ENST00000393308 ANP32CO43423 234 aa17.26■□□□□ 0.35
RAB43-205ENST00000393308 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
RAB43-205ENST00000393308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.25■□□□□ 0.35
RAB43-205ENST00000393308 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
RAB43-205ENST00000393308 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
RAB43-205ENST00000393308 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
RAB43-205ENST00000393308 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
RAB43-205ENST00000393308 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
RAB43-205ENST00000393308 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
RAB43-205ENST00000393308 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
RAB43-205ENST00000393308 NEFLP07196 543 aa17.19■□□□□ 0.34
RAB43-205ENST00000393308 PTPN23Q9H3S7 1636 aa17.19■□□□□ 0.34
RAB43-205ENST00000393308 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.342e-8■■■■□ 20.3
RAB43-205ENST00000393308 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
RAB43-205ENST00000393308 NAIPQ13075 1403 aa17.15■□□□□ 0.34
RAB43-205ENST00000393308 LRRIQ1Q96JM4 1722 aa17.15■□□□□ 0.34
RAB43-205ENST00000393308 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
RAB43-205ENST00000393308 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.34
RAB43-205ENST00000393308 GGT6Q6P531 493 aa17.12■□□□□ 0.33
RAB43-205ENST00000393308 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
RAB43-205ENST00000393308 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
RAB43-205ENST00000393308 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
RAB43-205ENST00000393308 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
RAB43-205ENST00000393308 CD109Q6YHK3 1445 aa17.09■□□□□ 0.33
RAB43-205ENST00000393308 ASXL2Q76L83 1435 aa17.09■□□□□ 0.33
RAB43-205ENST00000393308 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
RAB43-205ENST00000393308 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
RAB43-205ENST00000393308 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
RAB43-205ENST00000393308 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
RAB43-205ENST00000393308 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
RAB43-205ENST00000393308 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
RAB43-205ENST00000393308 EHBP1L1Q8N3D4 1523 aa17.04■□□□□ 0.32
RAB43-205ENST00000393308 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
RAB43-205ENST00000393308 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
RAB43-205ENST00000393308 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
RAB43-205ENST00000393308 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
RAB43-205ENST00000393308 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.32
RAB43-205ENST00000393308 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.32
RAB43-205ENST00000393308 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.32
RAB43-205ENST00000393308 MAGI3Q5TCQ9 1506 aa17.02■□□□□ 0.32
RAB43-205ENST00000393308 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
RAB43-205ENST00000393308 HSPA5P11021 654 aaKnown RBP17.02■□□□□ 0.31
RAB43-205ENST00000393308 ABCC2Q92887 1545 aa17■□□□□ 0.31
RAB43-205ENST00000393308 KIF3BO15066 747 aa16.99■□□□□ 0.31
RAB43-205ENST00000393308 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
RAB43-205ENST00000393308 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
RAB43-205ENST00000393308 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
RAB43-205ENST00000393308 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
RAB43-205ENST00000393308 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
RAB43-205ENST00000393308 ATP10BO94823 1461 aa16.97■□□□□ 0.31
RAB43-205ENST00000393308 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
RAB43-205ENST00000393308 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
RAB43-205ENST00000393308 HECW1Q76N89 1606 aa16.97■□□□□ 0.31
RAB43-205ENST00000393308 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
RAB43-205ENST00000393308 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
RAB43-205ENST00000393308 KDM6BO15054 1643 aa16.97■□□□□ 0.31
RAB43-205ENST00000393308 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
RAB43-205ENST00000393308 MSH5O43196 834 aa16.96■□□□□ 0.31
RAB43-205ENST00000393308 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
RAB43-205ENST00000393308 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
RAB43-205ENST00000393308 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
RAB43-205ENST00000393308 ARHGAP5Q13017 1502 aa16.94■□□□□ 0.3
RAB43-205ENST00000393308 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAB43-205ENST00000393308 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
RAB43-205ENST00000393308 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
RAB43-205ENST00000393308 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
RAB43-205ENST00000393308 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
RAB43-205ENST00000393308 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
RAB43-205ENST00000393308 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
RAB43-205ENST00000393308 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
RAB43-205ENST00000393308 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
RAB43-205ENST00000393308 FOXD1Q16676 465 aa16.88■□□□□ 0.29
RAB43-205ENST00000393308 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
RAB43-205ENST00000393308 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
RAB43-205ENST00000393308 TEX14Q8IWB6 1497 aa16.88■□□□□ 0.29
RAB43-205ENST00000393308 ANO8Q9HCE9 1232 aaPredicted RBP16.88■□□□□ 0.29
RAB43-205ENST00000393308 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
RAB43-205ENST00000393308 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
RAB43-205ENST00000393308 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
RAB43-205ENST00000393308 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
RAB43-205ENST00000393308 RAPGEF6Q8TEU7 1601 aa16.86■□□□□ 0.29
RAB43-205ENST00000393308 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
RAB43-205ENST00000393308 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
RAB43-205ENST00000393308 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
RAB43-205ENST00000393308 KANK1Q14678 1352 aa16.84■□□□□ 0.29
RAB43-205ENST00000393308 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
RAB43-205ENST00000393308 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
RAB43-205ENST00000393308 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
RAB43-205ENST00000393308 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
RAB43-205ENST00000393308 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
RAB43-205ENST00000393308 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
RAB43-205ENST00000393308 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
RAB43-205ENST00000393308 PKNOX2Q96KN3 472 aa16.81■□□□□ 0.28
RAB43-205ENST00000393308 FANCAO15360 1455 aa16.81■□□□□ 0.28
RAB43-205ENST00000393308 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
RAB43-205ENST00000393308 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
RAB43-205ENST00000393308 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
RAB43-205ENST00000393308 ZBED9Q6R2W3 1325 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms