RNA–Protein interactions for RNA: ENST00000393304.5

RAB43-202, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-202ENST00000393304 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
RAB43-202ENST00000393304 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
RAB43-202ENST00000393304 CFAP53Q96M91 514 aa18.72■□□□□ 0.59
RAB43-202ENST00000393304 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
RAB43-202ENST00000393304 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
RAB43-202ENST00000393304 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
RAB43-202ENST00000393304 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
RAB43-202ENST00000393304 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
RAB43-202ENST00000393304 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
RAB43-202ENST00000393304 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
RAB43-202ENST00000393304 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
RAB43-202ENST00000393304 PDE4AP27815 886 aa18.68■□□□□ 0.58
RAB43-202ENST00000393304 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
RAB43-202ENST00000393304 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
RAB43-202ENST00000393304 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
RAB43-202ENST00000393304 MYOM3Q5VTT5 1437 aa18.65■□□□□ 0.58
RAB43-202ENST00000393304 USP47Q96K76 1375 aa18.65■□□□□ 0.58
RAB43-202ENST00000393304 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
RAB43-202ENST00000393304 RRP1P56182 461 aaKnown RBP18.65■□□□□ 0.58
RAB43-202ENST00000393304 TRIM44Q96DX7 344 aaPredicted RBP18.64■□□□□ 0.58
RAB43-202ENST00000393304 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
RAB43-202ENST00000393304 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
RAB43-202ENST00000393304 PDS5BQ9NTI5 1447 aa18.63■□□□□ 0.57
RAB43-202ENST00000393304 FANCD2Q9BXW9 1451 aa18.63■□□□□ 0.57
RAB43-202ENST00000393304 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
RAB43-202ENST00000393304 PLIN1O60240 522 aa18.62■□□□□ 0.57
RAB43-202ENST00000393304 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
RAB43-202ENST00000393304 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
RAB43-202ENST00000393304 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
RAB43-202ENST00000393304 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
RAB43-202ENST00000393304 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
RAB43-202ENST00000393304 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
RAB43-202ENST00000393304 HNRNPMP52272 730 aaKnown RBP eCLIP18.59■□□□□ 0.572e-8■■■■□ 20.3
RAB43-202ENST00000393304 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
RAB43-202ENST00000393304 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
RAB43-202ENST00000393304 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
RAB43-202ENST00000393304 PANK3Q9H999 370 aa18.55■□□□□ 0.56
RAB43-202ENST00000393304 NCOA2Q15596 1464 aa18.55■□□□□ 0.56
RAB43-202ENST00000393304 SLKQ9H2G2 1235 aaPredicted RBP18.55■□□□□ 0.56
RAB43-202ENST00000393304 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
RAB43-202ENST00000393304 MS4A1P11836 297 aa18.54■□□□□ 0.56
RAB43-202ENST00000393304 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
RAB43-202ENST00000393304 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
RAB43-202ENST00000393304 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
RAB43-202ENST00000393304 CFTRP13569 1480 aa18.53■□□□□ 0.56
RAB43-202ENST00000393304 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
RAB43-202ENST00000393304 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
RAB43-202ENST00000393304 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
RAB43-202ENST00000393304 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
RAB43-202ENST00000393304 CUX1P39880 1505 aa18.52■□□□□ 0.56
RAB43-202ENST00000393304 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.56
RAB43-202ENST00000393304 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
RAB43-202ENST00000393304 NAP1L5Q96NT1 182 aaPredicted RBP18.52■□□□□ 0.56
RAB43-202ENST00000393304 MSH5O43196 834 aa18.51■□□□□ 0.55
RAB43-202ENST00000393304 FYCO1Q9BQS8 1478 aa18.51■□□□□ 0.55
RAB43-202ENST00000393304 L1TD1Q5T7N2 865 aaKnown RBP18.51■□□□□ 0.55
RAB43-202ENST00000393304 NCLP19338 710 aaKnown RBP18.5■□□□□ 0.55
RAB43-202ENST00000393304 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
RAB43-202ENST00000393304 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
RAB43-202ENST00000393304 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
RAB43-202ENST00000393304 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
RAB43-202ENST00000393304 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
RAB43-202ENST00000393304 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
RAB43-202ENST00000393304 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
RAB43-202ENST00000393304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.553e-9■■■□□ 17
RAB43-202ENST00000393304 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
RAB43-202ENST00000393304 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
RAB43-202ENST00000393304 GSE1Q14687 1217 aa18.46■□□□□ 0.55
RAB43-202ENST00000393304 HSCBQ8IWL3 235 aa18.46■□□□□ 0.55
RAB43-202ENST00000393304 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.55
RAB43-202ENST00000393304 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
RAB43-202ENST00000393304 RWDD1Q9H446 243 aaPredicted RBP18.45■□□□□ 0.54
RAB43-202ENST00000393304 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
RAB43-202ENST00000393304 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
RAB43-202ENST00000393304 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
RAB43-202ENST00000393304 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
RAB43-202ENST00000393304 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
RAB43-202ENST00000393304 NAIPQ13075 1403 aa18.42■□□□□ 0.54
RAB43-202ENST00000393304 C11orf95C9JLR9 678 aaPredicted RBP18.41■□□□□ 0.54
RAB43-202ENST00000393304 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
RAB43-202ENST00000393304 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
RAB43-202ENST00000393304 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
RAB43-202ENST00000393304 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
RAB43-202ENST00000393304 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
RAB43-202ENST00000393304 KANK1Q14678 1352 aa18.4■□□□□ 0.54
RAB43-202ENST00000393304 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
RAB43-202ENST00000393304 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
RAB43-202ENST00000393304 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
RAB43-202ENST00000393304 BRD4O60885 1362 aaPredicted RBP18.4■□□□□ 0.54
RAB43-202ENST00000393304 POGKQ9P215 609 aa18.39■□□□□ 0.53
RAB43-202ENST00000393304 APAF1O14727 1248 aa18.38■□□□□ 0.53
RAB43-202ENST00000393304 PRKCSHP14314 528 aaPredicted RBP18.37■□□□□ 0.53
RAB43-202ENST00000393304 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAB43-202ENST00000393304 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
RAB43-202ENST00000393304 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
RAB43-202ENST00000393304 EFCAB5A4FU69 1503 aa18.35■□□□□ 0.53
RAB43-202ENST00000393304 MAP3K1Q13233 1512 aa18.35■□□□□ 0.53
RAB43-202ENST00000393304 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
RAB43-202ENST00000393304 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
RAB43-202ENST00000393304 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms