RNA–Protein interactions for RNA: ENST00000392245.5

SUMO1-202, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUMO1, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-202ENST00000392245 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
SUMO1-202ENST00000392245 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
SUMO1-202ENST00000392245 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
SUMO1-202ENST00000392245 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
SUMO1-202ENST00000392245 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
SUMO1-202ENST00000392245 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
SUMO1-202ENST00000392245 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
SUMO1-202ENST00000392245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.33■□□□□ 0.85
SUMO1-202ENST00000392245 STRCQ7RTU9 1775 aa20.33■□□□□ 0.84
SUMO1-202ENST00000392245 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
SUMO1-202ENST00000392245 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
SUMO1-202ENST00000392245 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
SUMO1-202ENST00000392245 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
SUMO1-202ENST00000392245 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
SUMO1-202ENST00000392245 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
SUMO1-202ENST00000392245 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
SUMO1-202ENST00000392245 MAGI2Q86UL8 1455 aa20.27■□□□□ 0.84
SUMO1-202ENST00000392245 ARHGEF12Q9NZN5 1544 aa20.26■□□□□ 0.83
SUMO1-202ENST00000392245 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
SUMO1-202ENST00000392245 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
SUMO1-202ENST00000392245 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
SUMO1-202ENST00000392245 ATP10AO60312 1499 aa20.21■□□□□ 0.83
SUMO1-202ENST00000392245 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
SUMO1-202ENST00000392245 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
SUMO1-202ENST00000392245 PLCH2O75038 1416 aa20.16■□□□□ 0.82
SUMO1-202ENST00000392245 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
SUMO1-202ENST00000392245 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
SUMO1-202ENST00000392245 MYO5CQ9NQX4 1742 aa20.12■□□□□ 0.81
SUMO1-202ENST00000392245 LTBP4Q8N2S1 1624 aa20.12■□□□□ 0.81
SUMO1-202ENST00000392245 C3P01024 1663 aa20.11■□□□□ 0.81
SUMO1-202ENST00000392245 PTPRTO14522 1441 aa20.1■□□□□ 0.81
SUMO1-202ENST00000392245 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
SUMO1-202ENST00000392245 AFAP1Q8N556 730 aa20.06■□□□□ 0.8
SUMO1-202ENST00000392245 DIP2CQ9Y2E4 1556 aa20.04■□□□□ 0.8
SUMO1-202ENST00000392245 KIF14Q15058 1648 aa20.03■□□□□ 0.8
SUMO1-202ENST00000392245 KDM5CP41229 1560 aa20.03■□□□□ 0.8
SUMO1-202ENST00000392245 ZNF518AQ6AHZ1 1483 aa20.02■□□□□ 0.8
SUMO1-202ENST00000392245 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
SUMO1-202ENST00000392245 ABCA6Q8N139 1617 aa20.01■□□□□ 0.79
SUMO1-202ENST00000392245 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
SUMO1-202ENST00000392245 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
SUMO1-202ENST00000392245 REREQ9P2R6 1566 aa19.99■□□□□ 0.79
SUMO1-202ENST00000392245 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
SUMO1-202ENST00000392245 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
SUMO1-202ENST00000392245 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
SUMO1-202ENST00000392245 CDC42BPBQ9Y5S2 1711 aa19.96■□□□□ 0.79
SUMO1-202ENST00000392245 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
SUMO1-202ENST00000392245 CAMSAP1Q5T5Y3 1602 aa19.94■□□□□ 0.78
SUMO1-202ENST00000392245 CNKSR2Q8WXI2 1034 aa19.93■□□□□ 0.78
SUMO1-202ENST00000392245 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
SUMO1-202ENST00000392245 AGLP35573 1532 aa19.92■□□□□ 0.78
SUMO1-202ENST00000392245 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
SUMO1-202ENST00000392245 UBAP1LF5GYI3 381 aa19.91■□□□□ 0.78
SUMO1-202ENST00000392245 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
SUMO1-202ENST00000392245 NCKAP5LQ9HCH0 1330 aa19.91■□□□□ 0.78
SUMO1-202ENST00000392245 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
SUMO1-202ENST00000392245 EEA1Q15075 1411 aa19.9■□□□□ 0.78
SUMO1-202ENST00000392245 KIDINS220Q9ULH0 1771 aa19.9■□□□□ 0.78
SUMO1-202ENST00000392245 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
SUMO1-202ENST00000392245 ITSN2Q9NZM3 1697 aa19.88■□□□□ 0.77
SUMO1-202ENST00000392245 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
SUMO1-202ENST00000392245 CNTLNQ9NXG0 1405 aa19.85■□□□□ 0.77
SUMO1-202ENST00000392245 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SUMO1-202ENST00000392245 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
SUMO1-202ENST00000392245 HOXD11P31277 338 aaPredicted RBP19.85■□□□□ 0.77
SUMO1-202ENST00000392245 ABCC1P33527 1531 aa19.85■□□□□ 0.77
SUMO1-202ENST00000392245 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
SUMO1-202ENST00000392245 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SUMO1-202ENST00000392245 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.76
SUMO1-202ENST00000392245 CLIP1P30622 1438 aa19.82■□□□□ 0.76
SUMO1-202ENST00000392245 NPATQ14207 1427 aa19.82■□□□□ 0.76
SUMO1-202ENST00000392245 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
SUMO1-202ENST00000392245 CLTCQ00610 1675 aaKnown RBP19.8■□□□□ 0.76
SUMO1-202ENST00000392245 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
SUMO1-202ENST00000392245 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
SUMO1-202ENST00000392245 MYO3AQ8NEV4 1616 aa19.78■□□□□ 0.76
SUMO1-202ENST00000392245 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
SUMO1-202ENST00000392245 MED1Q15648 1581 aaPredicted RBP19.78■□□□□ 0.76
SUMO1-202ENST00000392245 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
SUMO1-202ENST00000392245 HSPA1LP34931 641 aa19.76■□□□□ 0.75
SUMO1-202ENST00000392245 SAMD9LQ8IVG5 1584 aa19.75■□□□□ 0.75
SUMO1-202ENST00000392245 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
SUMO1-202ENST00000392245 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
SUMO1-202ENST00000392245 PKD2Q13563 968 aa19.75■□□□□ 0.75
SUMO1-202ENST00000392245 CEP170BQ9Y4F5 1589 aaPredicted RBP19.74■□□□□ 0.75
SUMO1-202ENST00000392245 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
SUMO1-202ENST00000392245 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
SUMO1-202ENST00000392245 PTPRKQ15262 1439 aa19.72■□□□□ 0.75
SUMO1-202ENST00000392245 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
SUMO1-202ENST00000392245 SYCP2Q9BX26 1530 aa19.68■□□□□ 0.74
SUMO1-202ENST00000392245 HNRNPMP52272 730 aaKnown RBP eCLIP19.67■□□□□ 0.74
SUMO1-202ENST00000392245 SPAG9O60271 1321 aaKnown RBP19.67■□□□□ 0.74
SUMO1-202ENST00000392245 PLXNC1O60486 1568 aa19.66■□□□□ 0.74
SUMO1-202ENST00000392245 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
SUMO1-202ENST00000392245 GGT6Q6P531 493 aa19.65■□□□□ 0.74
SUMO1-202ENST00000392245 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
SUMO1-202ENST00000392245 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
SUMO1-202ENST00000392245 A2MP01023 1474 aa19.63■□□□□ 0.73
SUMO1-202ENST00000392245 TOM1O60784 492 aa19.63■□□□□ 0.73
SUMO1-202ENST00000392245 INO80Q9ULG1 1556 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms