RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 GOLGA6L3A6NEY3 463 aa22■■□□□ 1.11
TRAF3IP1-202ENST00000391993 ZMYND15Q9H091 742 aa22■■□□□ 1.11
TRAF3IP1-202ENST00000391993 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
TRAF3IP1-202ENST00000391993 TPRNQ4KMQ1 711 aa21.97■■□□□ 1.11
TRAF3IP1-202ENST00000391993 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
TRAF3IP1-202ENST00000391993 POGKQ9P215 609 aa21.96■■□□□ 1.11
TRAF3IP1-202ENST00000391993 KIF7Q2M1P5 1343 aa21.94■■□□□ 1.1
TRAF3IP1-202ENST00000391993 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
TRAF3IP1-202ENST00000391993 FAM43AQ8N2R8 423 aa21.92■■□□□ 1.1
TRAF3IP1-202ENST00000391993 FAM161AQ3B820 660 aa21.92■■□□□ 1.1
TRAF3IP1-202ENST00000391993 PODXL2Q9NZ53 605 aa21.92■■□□□ 1.1
TRAF3IP1-202ENST00000391993 MS4A1P11836 297 aa21.91■■□□□ 1.1
TRAF3IP1-202ENST00000391993 MYH16Q9H6N6 1097 aa21.91■■□□□ 1.1
TRAF3IP1-202ENST00000391993 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
TRAF3IP1-202ENST00000391993 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
TRAF3IP1-202ENST00000391993 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.1
TRAF3IP1-202ENST00000391993 FOXD4L1Q9NU39 408 aa21.88■■□□□ 1.09
TRAF3IP1-202ENST00000391993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.092e-6■■■■□ 19.3
TRAF3IP1-202ENST00000391993 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
TRAF3IP1-202ENST00000391993 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
TRAF3IP1-202ENST00000391993 DNTTIP2Q5QJE6 756 aaKnown RBP21.85■■□□□ 1.09
TRAF3IP1-202ENST00000391993 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.09
TRAF3IP1-202ENST00000391993 DCAF11Q8TEB1 546 aa21.82■■□□□ 1.08
TRAF3IP1-202ENST00000391993 FAM13BQ9NYF5 915 aa21.81■■□□□ 1.08
TRAF3IP1-202ENST00000391993 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
TRAF3IP1-202ENST00000391993 MSNP26038 577 aaKnown RBP21.79■■□□□ 1.08
TRAF3IP1-202ENST00000391993 NBPF8Q3BBV2 869 aa21.79■■□□□ 1.08
TRAF3IP1-202ENST00000391993 CCDC146Q8IYE0 955 aa21.79■■□□□ 1.08
TRAF3IP1-202ENST00000391993 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
TRAF3IP1-202ENST00000391993 CLUAP1Q96AJ1 413 aa21.78■■□□□ 1.08
TRAF3IP1-202ENST00000391993 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
TRAF3IP1-202ENST00000391993 SYNJ1O43426 1573 aa21.77■■□□□ 1.08
TRAF3IP1-202ENST00000391993 ST20-MTHFSA0A0A6YYL1 179 aa21.77■■□□□ 1.08
TRAF3IP1-202ENST00000391993 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.07
TRAF3IP1-202ENST00000391993 PTMAP06454 111 aaKnown RBP21.75■■□□□ 1.07
TRAF3IP1-202ENST00000391993 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
TRAF3IP1-202ENST00000391993 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
TRAF3IP1-202ENST00000391993 PNISRQ8TF01 805 aaKnown RBP21.74■■□□□ 1.07
TRAF3IP1-202ENST00000391993 CENPQQ7L2Z9 268 aaPredicted RBP21.74■■□□□ 1.07
TRAF3IP1-202ENST00000391993 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
TRAF3IP1-202ENST00000391993 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
TRAF3IP1-202ENST00000391993 WASHC2CQ9Y4E1 1318 aa21.73■■□□□ 1.07
TRAF3IP1-202ENST00000391993 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
TRAF3IP1-202ENST00000391993 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
TRAF3IP1-202ENST00000391993 MAPKBP1O60336 1514 aa21.72■■□□□ 1.07
TRAF3IP1-202ENST00000391993 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
TRAF3IP1-202ENST00000391993 PKD2Q13563 968 aa21.7■■□□□ 1.06
TRAF3IP1-202ENST00000391993 HSCBQ8IWL3 235 aa21.7■■□□□ 1.06
TRAF3IP1-202ENST00000391993 KNSTRNQ9Y448 316 aa21.7■■□□□ 1.06
TRAF3IP1-202ENST00000391993 BCL2L13Q9BXK5 485 aa21.7■■□□□ 1.06
TRAF3IP1-202ENST00000391993 RRAGDQ9NQL2 400 aaPredicted RBP21.7■■□□□ 1.06
TRAF3IP1-202ENST00000391993 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
TRAF3IP1-202ENST00000391993 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
TRAF3IP1-202ENST00000391993 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
TRAF3IP1-202ENST00000391993 GOLGA6L22H0YM25 854 aa21.68■■□□□ 1.06
TRAF3IP1-202ENST00000391993 COG6Q9Y2V7 657 aa21.68■■□□□ 1.06
TRAF3IP1-202ENST00000391993 PANK2Q9BZ23 570 aa21.68■■□□□ 1.06
TRAF3IP1-202ENST00000391993 CUX2O14529 1486 aa21.68■■□□□ 1.06
TRAF3IP1-202ENST00000391993 PLCB2Q00722 1185 aa21.67■■□□□ 1.06
TRAF3IP1-202ENST00000391993 RALBP1Q15311 655 aa21.66■■□□□ 1.06
TRAF3IP1-202ENST00000391993 MYBBP1AQ9BQG0 1328 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-202ENST00000391993 KTN1Q86UP2 1357 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-202ENST00000391993 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
TRAF3IP1-202ENST00000391993 PLEKHG5O94827 1062 aa21.64■■□□□ 1.06
TRAF3IP1-202ENST00000391993 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
TRAF3IP1-202ENST00000391993 USP47Q96K76 1375 aa21.62■■□□□ 1.05
TRAF3IP1-202ENST00000391993 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
TRAF3IP1-202ENST00000391993 FBLN2P98095 1184 aa21.61■■□□□ 1.05
TRAF3IP1-202ENST00000391993 TRAK2O60296 914 aa21.59■■□□□ 1.05
TRAF3IP1-202ENST00000391993 RRP9O43818 475 aaKnown RBP21.59■■□□□ 1.05
TRAF3IP1-202ENST00000391993 R3HCC1Q9Y3T6 440 aaKnown RBP21.58■■□□□ 1.04
TRAF3IP1-202ENST00000391993 UACAQ9BZF9 1416 aa21.58■■□□□ 1.04
TRAF3IP1-202ENST00000391993 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
TRAF3IP1-202ENST00000391993 ESPNB1AK53 854 aa21.55■■□□□ 1.04
TRAF3IP1-202ENST00000391993 KIF15Q9NS87 1388 aa21.55■■□□□ 1.04
TRAF3IP1-202ENST00000391993 PANK1Q8TE04 598 aa21.55■■□□□ 1.04
TRAF3IP1-202ENST00000391993 RRP7AQ9Y3A4 280 aaKnown RBP21.54■■□□□ 1.04
TRAF3IP1-202ENST00000391993 PANK3Q9H999 370 aa21.53■■□□□ 1.04
TRAF3IP1-202ENST00000391993 FOXD4L5Q5VV16 416 aaPredicted RBP21.53■■□□□ 1.04
TRAF3IP1-202ENST00000391993 FOXD4L4Q8WXT5 416 aaPredicted RBP21.53■■□□□ 1.04
TRAF3IP1-202ENST00000391993 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
TRAF3IP1-202ENST00000391993 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
TRAF3IP1-202ENST00000391993 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
TRAF3IP1-202ENST00000391993 XRCC6P12956 609 aaKnown RBP eCLIP21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 ADAMTS8Q9UP79 889 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 APAF1O14727 1248 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 BCAR3O75815 825 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 TSPY4P0CV99 314 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 TSPY10P0CW01 314 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
TRAF3IP1-202ENST00000391993 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
TRAF3IP1-202ENST00000391993 MRE11P49959 708 aa21.49■■□□□ 1.03
TRAF3IP1-202ENST00000391993 MPNDQ8N594 471 aa21.49■■□□□ 1.03
TRAF3IP1-202ENST00000391993 DDX49Q9Y6V7 483 aaKnown RBP21.49■■□□□ 1.03
TRAF3IP1-202ENST00000391993 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
TRAF3IP1-202ENST00000391993 CDK11BP21127 795 aaKnown RBP21.46■■□□□ 1.03
TRAF3IP1-202ENST00000391993 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
TRAF3IP1-202ENST00000391993 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
TRAF3IP1-202ENST00000391993 CHMP5Q9NZZ3 219 aa21.46■■□□□ 1.03
TRAF3IP1-202ENST00000391993 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms