RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 CFDP1Q9UEE9 299 aaPredicted RBP27.62■■■□□ 2.01
ERCC2-203ENST00000391944 KDM6BO15054 1643 aa27.59■■■□□ 2.01
ERCC2-203ENST00000391944 CAMSAP2Q08AD1 1489 aa27.59■■■□□ 2.01
ERCC2-203ENST00000391944 ACIN1Q9UKV3 1341 aaKnown RBP27.57■■■□□ 2
ERCC2-203ENST00000391944 ABCC10Q5T3U5 1492 aa27.56■■■□□ 2
ERCC2-203ENST00000391944 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
ERCC2-203ENST00000391944 MIER1Q8N108 512 aa27.53■■■□□ 2
ERCC2-203ENST00000391944 CDC42BPAQ5VT25 1732 aa27.52■■■□□ 2
ERCC2-203ENST00000391944 TRIM52Q96A61 297 aa27.51■■□□□ 1.99
ERCC2-203ENST00000391944 DENND4BO75064 1496 aaPredicted RBP27.49■■□□□ 1.99
ERCC2-203ENST00000391944 TONSLQ96HA7 1378 aa27.48■■□□□ 1.99
ERCC2-203ENST00000391944 CLASP1Q7Z460 1538 aa27.48■■□□□ 1.99
ERCC2-203ENST00000391944 ZNF777Q9ULD5 760 aaPredicted RBP27.48■■□□□ 1.99
ERCC2-203ENST00000391944 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
ERCC2-203ENST00000391944 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
ERCC2-203ENST00000391944 CROCC2H7BZ55 1655 aa27.45■■□□□ 1.98
ERCC2-203ENST00000391944 ADGBQ8N7X0 1667 aa27.45■■□□□ 1.98
ERCC2-203ENST00000391944 NCOA1Q15788 1441 aa27.44■■□□□ 1.98
ERCC2-203ENST00000391944 ADGRL2O95490 1459 aa27.44■■□□□ 1.98
ERCC2-203ENST00000391944 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
ERCC2-203ENST00000391944 ANKRD30AQ9BXX3 1397 aa27.36■■□□□ 1.97
ERCC2-203ENST00000391944 SHANK2Q9UPX8 1470 aa27.35■■□□□ 1.97
ERCC2-203ENST00000391944 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.97
ERCC2-203ENST00000391944 KDM5BQ9UGL1 1544 aa27.33■■□□□ 1.96
ERCC2-203ENST00000391944 PREX2Q70Z35 1606 aa27.32■■□□□ 1.96
ERCC2-203ENST00000391944 CDC42BPBQ9Y5S2 1711 aa27.31■■□□□ 1.96
ERCC2-203ENST00000391944 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
ERCC2-203ENST00000391944 UHRF1BP1LA0JNW5 1464 aa27.29■■□□□ 1.96
ERCC2-203ENST00000391944 C9orf84Q5VXU9 1444 aa27.29■■□□□ 1.96
ERCC2-203ENST00000391944 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
ERCC2-203ENST00000391944 SLC4A1APQ9BWU0 796 aaKnown RBP27.27■■□□□ 1.96
ERCC2-203ENST00000391944 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
ERCC2-203ENST00000391944 TSPY4P0CV99 314 aa27.27■■□□□ 1.96
ERCC2-203ENST00000391944 TSPY10P0CW01 314 aa27.27■■□□□ 1.96
ERCC2-203ENST00000391944 FOXD1Q16676 465 aa27.25■■□□□ 1.95
ERCC2-203ENST00000391944 SAMD9LQ8IVG5 1584 aa27.25■■□□□ 1.95
ERCC2-203ENST00000391944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.25■■□□□ 1.958e-6■□□□□ 10.5
ERCC2-203ENST00000391944 PZPP20742 1482 aa27.25■■□□□ 1.95
ERCC2-203ENST00000391944 ANKRD50Q9ULJ7 1429 aa27.25■■□□□ 1.95
ERCC2-203ENST00000391944 HNRNPMP52272 730 aaKnown RBP eCLIP27.24■■□□□ 1.952e-7■■■■□ 22.5
ERCC2-203ENST00000391944 TTC37Q6PGP7 1564 aa27.24■■□□□ 1.95
ERCC2-203ENST00000391944 RSPH4AQ5TD94 716 aa27.23■■□□□ 1.95
ERCC2-203ENST00000391944 ZCCHC11Q5TAX3 1644 aaKnown RBP27.21■■□□□ 1.95
ERCC2-203ENST00000391944 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.95
ERCC2-203ENST00000391944 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
ERCC2-203ENST00000391944 MYO5CQ9NQX4 1742 aa27.17■■□□□ 1.94
ERCC2-203ENST00000391944 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
ERCC2-203ENST00000391944 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
ERCC2-203ENST00000391944 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
ERCC2-203ENST00000391944 L3MBTL2Q969R5 705 aa27.15■■□□□ 1.94
ERCC2-203ENST00000391944 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
ERCC2-203ENST00000391944 KCNH8Q96L42 1107 aa27.13■■□□□ 1.93
ERCC2-203ENST00000391944 HIRIP3Q9BW71 556 aaPredicted RBP27.13■■□□□ 1.93
ERCC2-203ENST00000391944 KIAA1107Q9UPP5 1409 aa27.13■■□□□ 1.93
ERCC2-203ENST00000391944 DDX10Q13206 875 aaKnown RBP27.11■■□□□ 1.93
ERCC2-203ENST00000391944 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
ERCC2-203ENST00000391944 PLEKHH2Q8IVE3 1493 aa27.11■■□□□ 1.93
ERCC2-203ENST00000391944 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
ERCC2-203ENST00000391944 PLCH2O75038 1416 aa27.08■■□□□ 1.93
ERCC2-203ENST00000391944 KDM5DQ9BY66 1539 aa27.08■■□□□ 1.93
ERCC2-203ENST00000391944 TEX14Q8IWB6 1497 aa27.08■■□□□ 1.93
ERCC2-203ENST00000391944 PKD2Q13563 968 aa27.07■■□□□ 1.92
ERCC2-203ENST00000391944 NUP155O75694 1391 aa27.07■■□□□ 1.92
ERCC2-203ENST00000391944 EFCAB2Q5VUJ9 269 aa27.01■■□□□ 1.91
ERCC2-203ENST00000391944 ARHGEF12Q9NZN5 1544 aa26.99■■□□□ 1.91
ERCC2-203ENST00000391944 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
ERCC2-203ENST00000391944 HSPA5P11021 654 aaKnown RBP26.96■■□□□ 1.91
ERCC2-203ENST00000391944 EIF4G2P78344 907 aaKnown RBP eCLIP26.96■■□□□ 1.914e-6■■■□□ 16
ERCC2-203ENST00000391944 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
ERCC2-203ENST00000391944 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
ERCC2-203ENST00000391944 ARAP3Q8WWN8 1544 aa26.95■■□□□ 1.9
ERCC2-203ENST00000391944 WDR7Q9Y4E6 1490 aa26.94■■□□□ 1.9
ERCC2-203ENST00000391944 ABCC1P33527 1531 aa26.93■■□□□ 1.9
ERCC2-203ENST00000391944 FAM135AQ9P2D6 1515 aa26.9■■□□□ 1.9
ERCC2-203ENST00000391944 UNC13BO14795 1591 aa26.89■■□□□ 1.9
ERCC2-203ENST00000391944 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
ERCC2-203ENST00000391944 DUOX2Q9NRD8 1548 aa26.88■■□□□ 1.89
ERCC2-203ENST00000391944 TRAPPC8Q9Y2L5 1435 aa26.85■■□□□ 1.89
ERCC2-203ENST00000391944 ABCA9Q8IUA7 1624 aa26.84■■□□□ 1.89
ERCC2-203ENST00000391944 WASHC2AQ641Q2 1341 aa26.83■■□□□ 1.89
ERCC2-203ENST00000391944 ANP32CO43423 234 aa26.83■■□□□ 1.89
ERCC2-203ENST00000391944 ERBINQ96RT1 1412 aa26.82■■□□□ 1.88
ERCC2-203ENST00000391944 SPATA31E1Q6ZUB1 1445 aa26.81■■□□□ 1.88
ERCC2-203ENST00000391944 ASXL2Q76L83 1435 aa26.8■■□□□ 1.88
ERCC2-203ENST00000391944 IQGAP3Q86VI3 1631 aa26.79■■□□□ 1.88
ERCC2-203ENST00000391944 RTEL1-TNFRSF6BF6WH68 1400 aa26.79■■□□□ 1.88
ERCC2-203ENST00000391944 CCER2I3L3R5 266 aa26.78■■□□□ 1.88
ERCC2-203ENST00000391944 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
ERCC2-203ENST00000391944 MAGI2Q86UL8 1455 aa26.77■■□□□ 1.88
ERCC2-203ENST00000391944 SPAG9O60271 1321 aaKnown RBP26.76■■□□□ 1.88
ERCC2-203ENST00000391944 FANCAO15360 1455 aa26.76■■□□□ 1.87
ERCC2-203ENST00000391944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.75■■□□□ 1.871e-6■■□□□ 13.1
ERCC2-203ENST00000391944 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
ERCC2-203ENST00000391944 NPM1P06748 294 aaKnown RBP eCLIP26.72■■□□□ 1.87
ERCC2-203ENST00000391944 ZFYVE16Q7Z3T8 1539 aa26.72■■□□□ 1.87
ERCC2-203ENST00000391944 C11orf95C9JLR9 678 aaPredicted RBP26.72■■□□□ 1.87
ERCC2-203ENST00000391944 CCDC7Q96M83 1385 aa26.72■■□□□ 1.87
ERCC2-203ENST00000391944 PLA2R1Q13018 1463 aa26.7■■□□□ 1.86
ERCC2-203ENST00000391944 CCDC144AA2RUR9 1427 aa26.69■■□□□ 1.86
ERCC2-203ENST00000391944 ZNF326Q5BKZ1 582 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms