RNA–Protein interactions for RNA: ENST00000391828.7

NLRP3-206, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 3,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-206ENST00000391828 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
NLRP3-206ENST00000391828 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
NLRP3-206ENST00000391828 CCDC7Q96M83 1385 aa11.08□□□□□ -0.64
NLRP3-206ENST00000391828 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
NLRP3-206ENST00000391828 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
NLRP3-206ENST00000391828 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
NLRP3-206ENST00000391828 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
NLRP3-206ENST00000391828 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
NLRP3-206ENST00000391828 C11orf95C9JLR9 678 aaPredicted RBP11.07□□□□□ -0.64
NLRP3-206ENST00000391828 RGS3P49796 1198 aa11.07□□□□□ -0.64
NLRP3-206ENST00000391828 MAP3K1Q13233 1512 aa11.06□□□□□ -0.64
NLRP3-206ENST00000391828 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
NLRP3-206ENST00000391828 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
NLRP3-206ENST00000391828 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
NLRP3-206ENST00000391828 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
NLRP3-206ENST00000391828 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
NLRP3-206ENST00000391828 TNNT2P45379 298 aaPredicted RBP11.05□□□□□ -0.64
NLRP3-206ENST00000391828 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
NLRP3-206ENST00000391828 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
NLRP3-206ENST00000391828 USP47Q96K76 1375 aa11.05□□□□□ -0.64
NLRP3-206ENST00000391828 TMF1P82094 1093 aa11.04□□□□□ -0.64
NLRP3-206ENST00000391828 NAIPQ13075 1403 aa11.04□□□□□ -0.64
NLRP3-206ENST00000391828 NEFMP07197 916 aa11.03□□□□□ -0.64
NLRP3-206ENST00000391828 RALBP1Q15311 655 aa11.03□□□□□ -0.64
NLRP3-206ENST00000391828 ARXQ96QS3 562 aa11.03□□□□□ -0.64
NLRP3-206ENST00000391828 PLIN1O60240 522 aa11.02□□□□□ -0.65
NLRP3-206ENST00000391828 CNTLNQ9NXG0 1405 aa11.02□□□□□ -0.65
NLRP3-206ENST00000391828 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
NLRP3-206ENST00000391828 KTN1Q86UP2 1357 aaKnown RBP11.01□□□□□ -0.65
NLRP3-206ENST00000391828 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
NLRP3-206ENST00000391828 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
NLRP3-206ENST00000391828 NLRP13Q86W25 1043 aa11.01□□□□□ -0.65
NLRP3-206ENST00000391828 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
NLRP3-206ENST00000391828 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
NLRP3-206ENST00000391828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
NLRP3-206ENST00000391828 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
NLRP3-206ENST00000391828 FRAT1Q92837 279 aaPredicted RBP10.99□□□□□ -0.65
NLRP3-206ENST00000391828 CARMIL2Q6F5E8 1435 aa10.99□□□□□ -0.65
NLRP3-206ENST00000391828 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
NLRP3-206ENST00000391828 PPM1GO15355 546 aaPredicted RBP10.99□□□□□ -0.65
NLRP3-206ENST00000391828 PANK3Q9H999 370 aa10.98□□□□□ -0.65
NLRP3-206ENST00000391828 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
NLRP3-206ENST00000391828 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
NLRP3-206ENST00000391828 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
NLRP3-206ENST00000391828 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
NLRP3-206ENST00000391828 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
NLRP3-206ENST00000391828 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.65
NLRP3-206ENST00000391828 USP35Q9P2H5 1018 aa10.96□□□□□ -0.65
NLRP3-206ENST00000391828 KIF15Q9NS87 1388 aa10.96□□□□□ -0.66
NLRP3-206ENST00000391828 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.95□□□□□ -0.66
NLRP3-206ENST00000391828 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
NLRP3-206ENST00000391828 EFCAB5A4FU69 1503 aa10.95□□□□□ -0.66
NLRP3-206ENST00000391828 TCERG1O14776 1098 aaKnown RBP10.95□□□□□ -0.66
NLRP3-206ENST00000391828 RRP1P56182 461 aaKnown RBP10.95□□□□□ -0.66
NLRP3-206ENST00000391828 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
NLRP3-206ENST00000391828 AKNAQ7Z591 1439 aa10.94□□□□□ -0.66
NLRP3-206ENST00000391828 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
NLRP3-206ENST00000391828 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
NLRP3-206ENST00000391828 PDE4AP27815 886 aa10.92□□□□□ -0.66
NLRP3-206ENST00000391828 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
NLRP3-206ENST00000391828 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
NLRP3-206ENST00000391828 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
NLRP3-206ENST00000391828 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
NLRP3-206ENST00000391828 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
NLRP3-206ENST00000391828 SAFB2Q14151 953 aaKnown RBP eCLIP10.91□□□□□ -0.66
NLRP3-206ENST00000391828 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
NLRP3-206ENST00000391828 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
NLRP3-206ENST00000391828 SLC4A3P48751 1232 aa10.91□□□□□ -0.66
NLRP3-206ENST00000391828 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
NLRP3-206ENST00000391828 UBE2Q2Q8WVN8 375 aa10.91□□□□□ -0.66
NLRP3-206ENST00000391828 CRBNQ96SW2 442 aa10.9□□□□□ -0.66
NLRP3-206ENST00000391828 CCDC144AA2RUR9 1427 aa10.9□□□□□ -0.66
NLRP3-206ENST00000391828 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
NLRP3-206ENST00000391828 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
NLRP3-206ENST00000391828 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
NLRP3-206ENST00000391828 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
NLRP3-206ENST00000391828 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
NLRP3-206ENST00000391828 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
NLRP3-206ENST00000391828 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
NLRP3-206ENST00000391828 KIF3BO15066 747 aa10.88□□□□□ -0.67
NLRP3-206ENST00000391828 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
NLRP3-206ENST00000391828 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
NLRP3-206ENST00000391828 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
NLRP3-206ENST00000391828 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
NLRP3-206ENST00000391828 GGT6Q6P531 493 aa10.87□□□□□ -0.67
NLRP3-206ENST00000391828 MORC1Q86VD1 984 aa10.87□□□□□ -0.67
NLRP3-206ENST00000391828 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
NLRP3-206ENST00000391828 DAPK1P53355 1430 aa10.87□□□□□ -0.67
NLRP3-206ENST00000391828 FTSJ3Q8IY81 847 aaKnown RBP10.86□□□□□ -0.67
NLRP3-206ENST00000391828 PTPRGP23470 1445 aa10.86□□□□□ -0.67
NLRP3-206ENST00000391828 BECN1Q14457 450 aa10.86□□□□□ -0.67
NLRP3-206ENST00000391828 PRDM2Q13029 1718 aa10.85□□□□□ -0.67
NLRP3-206ENST00000391828 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
NLRP3-206ENST00000391828 APAF1O14727 1248 aa10.85□□□□□ -0.67
NLRP3-206ENST00000391828 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms