RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 CCDC18Q5T9S5 1454 aa16.79■□□□□ 0.28
PCNX4-202ENST00000391611 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
PCNX4-202ENST00000391611 SAFB2Q14151 953 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCNX4-202ENST00000391611 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
PCNX4-202ENST00000391611 PLEKHG5O94827 1062 aa16.77■□□□□ 0.27
PCNX4-202ENST00000391611 NLRP13Q86W25 1043 aa16.77■□□□□ 0.27
PCNX4-202ENST00000391611 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.27
PCNX4-202ENST00000391611 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
PCNX4-202ENST00000391611 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
PCNX4-202ENST00000391611 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
PCNX4-202ENST00000391611 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
PCNX4-202ENST00000391611 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
PCNX4-202ENST00000391611 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
PCNX4-202ENST00000391611 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
PCNX4-202ENST00000391611 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
PCNX4-202ENST00000391611 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
PCNX4-202ENST00000391611 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
PCNX4-202ENST00000391611 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
PCNX4-202ENST00000391611 TPRNQ4KMQ1 711 aa16.72■□□□□ 0.27
PCNX4-202ENST00000391611 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
PCNX4-202ENST00000391611 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
PCNX4-202ENST00000391611 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
PCNX4-202ENST00000391611 PDE4AP27815 886 aa16.71■□□□□ 0.27
PCNX4-202ENST00000391611 CLUAP1Q96AJ1 413 aa16.7■□□□□ 0.26
PCNX4-202ENST00000391611 PANK3Q9H999 370 aa16.7■□□□□ 0.26
PCNX4-202ENST00000391611 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
PCNX4-202ENST00000391611 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
PCNX4-202ENST00000391611 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-202ENST00000391611 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
PCNX4-202ENST00000391611 USP47Q96K76 1375 aa16.68■□□□□ 0.26
PCNX4-202ENST00000391611 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
PCNX4-202ENST00000391611 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
PCNX4-202ENST00000391611 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
PCNX4-202ENST00000391611 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
PCNX4-202ENST00000391611 POGKQ9P215 609 aa16.66■□□□□ 0.26
PCNX4-202ENST00000391611 GLIPR1L2Q4G1C9 344 aa16.66■□□□□ 0.26
PCNX4-202ENST00000391611 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
PCNX4-202ENST00000391611 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
PCNX4-202ENST00000391611 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
PCNX4-202ENST00000391611 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
PCNX4-202ENST00000391611 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
PCNX4-202ENST00000391611 GGT6Q6P531 493 aa16.64■□□□□ 0.25
PCNX4-202ENST00000391611 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
PCNX4-202ENST00000391611 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
PCNX4-202ENST00000391611 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
PCNX4-202ENST00000391611 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCNX4-202ENST00000391611 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
PCNX4-202ENST00000391611 STK26Q9P289 416 aa16.64■□□□□ 0.25
PCNX4-202ENST00000391611 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
PCNX4-202ENST00000391611 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
PCNX4-202ENST00000391611 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
PCNX4-202ENST00000391611 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
PCNX4-202ENST00000391611 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
PCNX4-202ENST00000391611 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
PCNX4-202ENST00000391611 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
PCNX4-202ENST00000391611 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
PCNX4-202ENST00000391611 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
PCNX4-202ENST00000391611 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
PCNX4-202ENST00000391611 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
PCNX4-202ENST00000391611 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
PCNX4-202ENST00000391611 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
PCNX4-202ENST00000391611 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
PCNX4-202ENST00000391611 SOX12O15370 315 aa16.58■□□□□ 0.24
PCNX4-202ENST00000391611 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
PCNX4-202ENST00000391611 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
PCNX4-202ENST00000391611 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
PCNX4-202ENST00000391611 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
PCNX4-202ENST00000391611 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
PCNX4-202ENST00000391611 APBB1O00213 710 aa16.56■□□□□ 0.24
PCNX4-202ENST00000391611 KIF3BO15066 747 aa16.56■□□□□ 0.24
PCNX4-202ENST00000391611 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
PCNX4-202ENST00000391611 APAF1O14727 1248 aa16.55■□□□□ 0.24
PCNX4-202ENST00000391611 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
PCNX4-202ENST00000391611 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
PCNX4-202ENST00000391611 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
PCNX4-202ENST00000391611 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
PCNX4-202ENST00000391611 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
PCNX4-202ENST00000391611 MS4A1P11836 297 aa16.53■□□□□ 0.24
PCNX4-202ENST00000391611 COG6Q9Y2V7 657 aa16.52■□□□□ 0.24
PCNX4-202ENST00000391611 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.23
PCNX4-202ENST00000391611 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.23
PCNX4-202ENST00000391611 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.23
PCNX4-202ENST00000391611 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
PCNX4-202ENST00000391611 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
PCNX4-202ENST00000391611 AKNAQ7Z591 1439 aa16.51■□□□□ 0.23
PCNX4-202ENST00000391611 MSH5O43196 834 aa16.51■□□□□ 0.23
PCNX4-202ENST00000391611 PTMAP06454 111 aaKnown RBP16.51■□□□□ 0.23
PCNX4-202ENST00000391611 KANK1Q14678 1352 aa16.5■□□□□ 0.23
PCNX4-202ENST00000391611 CFTRP13569 1480 aa16.5■□□□□ 0.23
PCNX4-202ENST00000391611 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
PCNX4-202ENST00000391611 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
PCNX4-202ENST00000391611 SMC4Q9NTJ3 1288 aa16.49■□□□□ 0.23
PCNX4-202ENST00000391611 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
PCNX4-202ENST00000391611 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
PCNX4-202ENST00000391611 PLCB2Q00722 1185 aa16.48■□□□□ 0.23
PCNX4-202ENST00000391611 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-202ENST00000391611 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
PCNX4-202ENST00000391611 MLECQ14165 292 aa16.47■□□□□ 0.23
PCNX4-202ENST00000391611 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
PCNX4-202ENST00000391611 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms