RNA–Protein interactions for RNA: ENST00000389658.3

LAMA1-201, Transcript of laminin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA1, Length 9,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-201ENST00000389658 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
LAMA1-201ENST00000389658 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
LAMA1-201ENST00000389658 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
LAMA1-201ENST00000389658 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
LAMA1-201ENST00000389658 APBB1O00213 710 aa12.71□□□□□ -0.37
LAMA1-201ENST00000389658 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.38
LAMA1-201ENST00000389658 KANK1Q14678 1352 aa12.71□□□□□ -0.38
LAMA1-201ENST00000389658 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
LAMA1-201ENST00000389658 SOX12O15370 315 aa12.7□□□□□ -0.38
LAMA1-201ENST00000389658 GPATCH3Q96I76 525 aa12.7□□□□□ -0.38
LAMA1-201ENST00000389658 SRPK2P78362 688 aaKnown RBP12.69□□□□□ -0.38
LAMA1-201ENST00000389658 PDE4CQ08493 712 aa12.69□□□□□ -0.38
LAMA1-201ENST00000389658 SETQ01105 290 aaPredicted RBP12.69□□□□□ -0.38
LAMA1-201ENST00000389658 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
LAMA1-201ENST00000389658 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
LAMA1-201ENST00000389658 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
LAMA1-201ENST00000389658 EEA1Q15075 1411 aa12.68□□□□□ -0.38
LAMA1-201ENST00000389658 PHF14O94880 888 aa12.67□□□□□ -0.38
LAMA1-201ENST00000389658 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
LAMA1-201ENST00000389658 CEP89Q96ST8 783 aa12.67□□□□□ -0.38
LAMA1-201ENST00000389658 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
LAMA1-201ENST00000389658 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
LAMA1-201ENST00000389658 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
LAMA1-201ENST00000389658 SLKQ9H2G2 1235 aaPredicted RBP12.66□□□□□ -0.38
LAMA1-201ENST00000389658 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
LAMA1-201ENST00000389658 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
LAMA1-201ENST00000389658 TPM3P06753 285 aa12.65□□□□□ -0.38
LAMA1-201ENST00000389658 CREBRFQ8IUR6 639 aa12.65□□□□□ -0.38
LAMA1-201ENST00000389658 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.39
LAMA1-201ENST00000389658 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
LAMA1-201ENST00000389658 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
LAMA1-201ENST00000389658 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
LAMA1-201ENST00000389658 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
LAMA1-201ENST00000389658 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
LAMA1-201ENST00000389658 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
LAMA1-201ENST00000389658 PMFBP1Q8TBY8 1022 aa12.61□□□□□ -0.39
LAMA1-201ENST00000389658 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
LAMA1-201ENST00000389658 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
LAMA1-201ENST00000389658 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
LAMA1-201ENST00000389658 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
LAMA1-201ENST00000389658 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
LAMA1-201ENST00000389658 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
LAMA1-201ENST00000389658 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
LAMA1-201ENST00000389658 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
LAMA1-201ENST00000389658 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
LAMA1-201ENST00000389658 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
LAMA1-201ENST00000389658 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
LAMA1-201ENST00000389658 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
LAMA1-201ENST00000389658 KIF27Q86VH2 1401 aa12.58□□□□□ -0.4
LAMA1-201ENST00000389658 CCER2I3L3R5 266 aa12.58□□□□□ -0.4
LAMA1-201ENST00000389658 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
LAMA1-201ENST00000389658 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
LAMA1-201ENST00000389658 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
LAMA1-201ENST00000389658 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
LAMA1-201ENST00000389658 HMMRO75330 724 aa12.57□□□□□ -0.4
LAMA1-201ENST00000389658 PES1O00541 588 aaKnown RBP12.57□□□□□ -0.4
LAMA1-201ENST00000389658 KIF3AQ9Y496 699 aa12.57□□□□□ -0.4
LAMA1-201ENST00000389658 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
LAMA1-201ENST00000389658 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
LAMA1-201ENST00000389658 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
LAMA1-201ENST00000389658 G3V3G9 751 aa12.56□□□□□ -0.4
LAMA1-201ENST00000389658 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
LAMA1-201ENST00000389658 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
LAMA1-201ENST00000389658 ST18O60284 1047 aa12.56□□□□□ -0.4
LAMA1-201ENST00000389658 CCDC70Q6NSX1 233 aa12.56□□□□□ -0.4
LAMA1-201ENST00000389658 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
LAMA1-201ENST00000389658 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
LAMA1-201ENST00000389658 MARCH6O60337 910 aa12.55□□□□□ -0.4
LAMA1-201ENST00000389658 SF3A1Q15459 793 aaKnown RBP12.55□□□□□ -0.4
LAMA1-201ENST00000389658 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
LAMA1-201ENST00000389658 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
LAMA1-201ENST00000389658 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
LAMA1-201ENST00000389658 GPS2Q13227 327 aa12.55□□□□□ -0.4
LAMA1-201ENST00000389658 TPM2P07951 284 aa12.54□□□□□ -0.4
LAMA1-201ENST00000389658 CALRP27797 417 aaKnown RBP12.54□□□□□ -0.4
LAMA1-201ENST00000389658 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
LAMA1-201ENST00000389658 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
LAMA1-201ENST00000389658 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
LAMA1-201ENST00000389658 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
LAMA1-201ENST00000389658 STK26Q9P289 416 aa12.53□□□□□ -0.4
LAMA1-201ENST00000389658 TPM1P09493 284 aa12.53□□□□□ -0.4
LAMA1-201ENST00000389658 EIF3AQ14152 1382 aaKnown RBP12.53□□□□□ -0.4
LAMA1-201ENST00000389658 CCAR2Q8N163 923 aaKnown RBP12.52□□□□□ -0.4
LAMA1-201ENST00000389658 GOLGA6L19H0YKK7 550 aa12.52□□□□□ -0.4
LAMA1-201ENST00000389658 H3BQV1 296 aa12.52□□□□□ -0.4
LAMA1-201ENST00000389658 IFFO2Q5TF58 517 aa12.52□□□□□ -0.4
LAMA1-201ENST00000389658 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
LAMA1-201ENST00000389658 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
LAMA1-201ENST00000389658 IPO9Q96P70 1041 aaKnown RBP12.52□□□□□ -0.41
LAMA1-201ENST00000389658 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
LAMA1-201ENST00000389658 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
LAMA1-201ENST00000389658 RALBP1Q15311 655 aa12.51□□□□□ -0.41
LAMA1-201ENST00000389658 MLECQ14165 292 aa12.51□□□□□ -0.41
LAMA1-201ENST00000389658 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
LAMA1-201ENST00000389658 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
LAMA1-201ENST00000389658 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
LAMA1-201ENST00000389658 RB1CC1Q8TDY2 1594 aa12.5□□□□□ -0.41
LAMA1-201ENST00000389658 ARHGAP35Q9NRY4 1499 aa12.49□□□□□ -0.41
LAMA1-201ENST00000389658 SLC4A10Q6U841 1118 aa12.49□□□□□ -0.41
LAMA1-201ENST00000389658 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms