RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
CAPRIN1-202ENST00000389645 NAIPQ13075 1403 aa17.18■□□□□ 0.34
CAPRIN1-202ENST00000389645 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
CAPRIN1-202ENST00000389645 SHROOM2Q13796 1616 aa17.17■□□□□ 0.34
CAPRIN1-202ENST00000389645 TCOF1Q13428 1488 aaKnown RBP17.17■□□□□ 0.34
CAPRIN1-202ENST00000389645 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
CAPRIN1-202ENST00000389645 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
CAPRIN1-202ENST00000389645 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
CAPRIN1-202ENST00000389645 BCANQ96GW7 911 aa17.15■□□□□ 0.34
CAPRIN1-202ENST00000389645 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
CAPRIN1-202ENST00000389645 ABCC5O15440 1437 aa17.12■□□□□ 0.33
CAPRIN1-202ENST00000389645 DAPK1P53355 1430 aa17.11■□□□□ 0.33
CAPRIN1-202ENST00000389645 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
CAPRIN1-202ENST00000389645 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAPRIN1-202ENST00000389645 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.33
CAPRIN1-202ENST00000389645 TONSLQ96HA7 1378 aa17.08■□□□□ 0.33
CAPRIN1-202ENST00000389645 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.33
CAPRIN1-202ENST00000389645 KDM6BO15054 1643 aa17.08■□□□□ 0.32
CAPRIN1-202ENST00000389645 FOXD1Q16676 465 aa17.07■□□□□ 0.32
CAPRIN1-202ENST00000389645 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
CAPRIN1-202ENST00000389645 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
CAPRIN1-202ENST00000389645 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
CAPRIN1-202ENST00000389645 ANP32CO43423 234 aa17.03■□□□□ 0.32
CAPRIN1-202ENST00000389645 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
CAPRIN1-202ENST00000389645 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
CAPRIN1-202ENST00000389645 ITSN2Q9NZM3 1697 aa17■□□□□ 0.31
CAPRIN1-202ENST00000389645 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
CAPRIN1-202ENST00000389645 AKNAQ7Z591 1439 aa17■□□□□ 0.31
CAPRIN1-202ENST00000389645 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
CAPRIN1-202ENST00000389645 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
CAPRIN1-202ENST00000389645 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
CAPRIN1-202ENST00000389645 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
CAPRIN1-202ENST00000389645 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
CAPRIN1-202ENST00000389645 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
CAPRIN1-202ENST00000389645 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
CAPRIN1-202ENST00000389645 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
CAPRIN1-202ENST00000389645 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
CAPRIN1-202ENST00000389645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.32e-25■□□□□ 8.2
CAPRIN1-202ENST00000389645 NEFLP07196 543 aa16.95■□□□□ 0.3
CAPRIN1-202ENST00000389645 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
CAPRIN1-202ENST00000389645 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
CAPRIN1-202ENST00000389645 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
CAPRIN1-202ENST00000389645 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
CAPRIN1-202ENST00000389645 FKBP8Q14318 412 aa16.94■□□□□ 0.3
CAPRIN1-202ENST00000389645 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
CAPRIN1-202ENST00000389645 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
CAPRIN1-202ENST00000389645 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
CAPRIN1-202ENST00000389645 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
CAPRIN1-202ENST00000389645 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
CAPRIN1-202ENST00000389645 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
CAPRIN1-202ENST00000389645 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
CAPRIN1-202ENST00000389645 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
CAPRIN1-202ENST00000389645 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
CAPRIN1-202ENST00000389645 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
CAPRIN1-202ENST00000389645 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
CAPRIN1-202ENST00000389645 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
CAPRIN1-202ENST00000389645 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
CAPRIN1-202ENST00000389645 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
CAPRIN1-202ENST00000389645 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
CAPRIN1-202ENST00000389645 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
CAPRIN1-202ENST00000389645 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
CAPRIN1-202ENST00000389645 CROCC2H7BZ55 1655 aa16.84■□□□□ 0.29
CAPRIN1-202ENST00000389645 PLCH2O75038 1416 aa16.84■□□□□ 0.29
CAPRIN1-202ENST00000389645 PKD2Q13563 968 aa16.84■□□□□ 0.29
CAPRIN1-202ENST00000389645 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
CAPRIN1-202ENST00000389645 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.29
CAPRIN1-202ENST00000389645 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.29
CAPRIN1-202ENST00000389645 NUP155O75694 1391 aa16.83■□□□□ 0.28
CAPRIN1-202ENST00000389645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.283e-12■■■□□ 15.2
CAPRIN1-202ENST00000389645 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.28
CAPRIN1-202ENST00000389645 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
CAPRIN1-202ENST00000389645 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
CAPRIN1-202ENST00000389645 ASXL2Q76L83 1435 aa16.82■□□□□ 0.28
CAPRIN1-202ENST00000389645 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
CAPRIN1-202ENST00000389645 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
CAPRIN1-202ENST00000389645 WDR7Q9Y4E6 1490 aa16.81■□□□□ 0.28
CAPRIN1-202ENST00000389645 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
CAPRIN1-202ENST00000389645 PZPP20742 1482 aa16.81■□□□□ 0.28
CAPRIN1-202ENST00000389645 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
CAPRIN1-202ENST00000389645 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
CAPRIN1-202ENST00000389645 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
CAPRIN1-202ENST00000389645 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
CAPRIN1-202ENST00000389645 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
CAPRIN1-202ENST00000389645 MYT1LQ9UL68 1186 aa16.78■□□□□ 0.28
CAPRIN1-202ENST00000389645 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
CAPRIN1-202ENST00000389645 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
CAPRIN1-202ENST00000389645 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
CAPRIN1-202ENST00000389645 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
CAPRIN1-202ENST00000389645 KIAA1107Q9UPP5 1409 aa16.75■□□□□ 0.27
CAPRIN1-202ENST00000389645 SPAG9O60271 1321 aaKnown RBP16.73■□□□□ 0.27
CAPRIN1-202ENST00000389645 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
CAPRIN1-202ENST00000389645 FANCAO15360 1455 aa16.71■□□□□ 0.27
CAPRIN1-202ENST00000389645 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
CAPRIN1-202ENST00000389645 NBPF8Q3BBV2 869 aa16.71■□□□□ 0.26
CAPRIN1-202ENST00000389645 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
CAPRIN1-202ENST00000389645 ABCC1P33527 1531 aa16.69■□□□□ 0.26
CAPRIN1-202ENST00000389645 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
CAPRIN1-202ENST00000389645 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
CAPRIN1-202ENST00000389645 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CAPRIN1-202ENST00000389645 ABCA9Q8IUA7 1624 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms