RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
IFT88-203ENST00000389373 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
IFT88-203ENST00000389373 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
IFT88-203ENST00000389373 HECW1Q76N89 1606 aa16.29■□□□□ 0.2
IFT88-203ENST00000389373 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
IFT88-203ENST00000389373 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
IFT88-203ENST00000389373 ZMYM4Q5VZL5 1548 aa16.28■□□□□ 0.2
IFT88-203ENST00000389373 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
IFT88-203ENST00000389373 ATP10AO60312 1499 aa16.25■□□□□ 0.19
IFT88-203ENST00000389373 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
IFT88-203ENST00000389373 EFCAB2Q5VUJ9 269 aa16.23■□□□□ 0.19
IFT88-203ENST00000389373 PLCH2O75038 1416 aa16.22■□□□□ 0.19
IFT88-203ENST00000389373 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
IFT88-203ENST00000389373 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
IFT88-203ENST00000389373 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
IFT88-203ENST00000389373 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
IFT88-203ENST00000389373 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
IFT88-203ENST00000389373 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
IFT88-203ENST00000389373 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
IFT88-203ENST00000389373 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
IFT88-203ENST00000389373 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
IFT88-203ENST00000389373 PTPRTO14522 1441 aa16.14■□□□□ 0.17
IFT88-203ENST00000389373 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
IFT88-203ENST00000389373 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
IFT88-203ENST00000389373 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
IFT88-203ENST00000389373 EEA1Q15075 1411 aa16.09■□□□□ 0.17
IFT88-203ENST00000389373 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.17
IFT88-203ENST00000389373 SETD1BQ9UPS6 1966 aaKnown RBP16.08■□□□□ 0.16
IFT88-203ENST00000389373 UBAP1LF5GYI3 381 aa16.08■□□□□ 0.16
IFT88-203ENST00000389373 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.16
IFT88-203ENST00000389373 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.16
IFT88-203ENST00000389373 LTBP4Q8N2S1 1624 aa16.06■□□□□ 0.16
IFT88-203ENST00000389373 NCKAP5LQ9HCH0 1330 aa16.06■□□□□ 0.16
IFT88-203ENST00000389373 C3P01024 1663 aa16.05■□□□□ 0.16
IFT88-203ENST00000389373 KIF14Q15058 1648 aa16.05■□□□□ 0.16
IFT88-203ENST00000389373 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
IFT88-203ENST00000389373 CLIP1P30622 1438 aa16.03■□□□□ 0.16
IFT88-203ENST00000389373 NCOA1Q15788 1441 aa16.03■□□□□ 0.16
IFT88-203ENST00000389373 FMN1Q68DA7 1419 aa16.03■□□□□ 0.16
IFT88-203ENST00000389373 ZNF335Q9H4Z2 1342 aaPredicted RBP16.03■□□□□ 0.16
IFT88-203ENST00000389373 KDM5CP41229 1560 aa16.03■□□□□ 0.16
IFT88-203ENST00000389373 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.16
IFT88-203ENST00000389373 IQSEC2Q5JU85 1478 aa16.02■□□□□ 0.15
IFT88-203ENST00000389373 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
IFT88-203ENST00000389373 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
IFT88-203ENST00000389373 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
IFT88-203ENST00000389373 CAMSAP1Q5T5Y3 1602 aa15.99■□□□□ 0.15
IFT88-203ENST00000389373 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
IFT88-203ENST00000389373 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
IFT88-203ENST00000389373 REREQ9P2R6 1566 aa15.98■□□□□ 0.15
IFT88-203ENST00000389373 AGLP35573 1532 aa15.98■□□□□ 0.15
IFT88-203ENST00000389373 ZMYM3Q14202 1370 aa15.97■□□□□ 0.15
IFT88-203ENST00000389373 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.14
IFT88-203ENST00000389373 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
IFT88-203ENST00000389373 PKD2Q13563 968 aa15.94■□□□□ 0.14
IFT88-203ENST00000389373 CDC42BPBQ9Y5S2 1711 aa15.94■□□□□ 0.14
IFT88-203ENST00000389373 NPATQ14207 1427 aa15.93■□□□□ 0.14
IFT88-203ENST00000389373 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
IFT88-203ENST00000389373 GGT6Q6P531 493 aa15.92■□□□□ 0.14
IFT88-203ENST00000389373 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
IFT88-203ENST00000389373 ABCC1P33527 1531 aa15.92■□□□□ 0.14
IFT88-203ENST00000389373 SPAG9O60271 1321 aaKnown RBP15.92■□□□□ 0.14
IFT88-203ENST00000389373 HSPA1LP34931 641 aa15.91■□□□□ 0.14
IFT88-203ENST00000389373 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
IFT88-203ENST00000389373 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
IFT88-203ENST00000389373 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
IFT88-203ENST00000389373 TOM1O60784 492 aa15.87■□□□□ 0.13
IFT88-203ENST00000389373 SUPT6HQ7KZ85 1726 aaKnown RBP15.86■□□□□ 0.13
IFT88-203ENST00000389373 LRRIQ1Q96JM4 1722 aa15.86■□□□□ 0.13
IFT88-203ENST00000389373 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
IFT88-203ENST00000389373 SAMD9LQ8IVG5 1584 aa15.85■□□□□ 0.13
IFT88-203ENST00000389373 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
IFT88-203ENST00000389373 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
IFT88-203ENST00000389373 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
IFT88-203ENST00000389373 CLTCQ00610 1675 aaKnown RBP15.84■□□□□ 0.13
IFT88-203ENST00000389373 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
IFT88-203ENST00000389373 TCOF1Q13428 1488 aaKnown RBP15.83■□□□□ 0.12
IFT88-203ENST00000389373 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
IFT88-203ENST00000389373 MED1Q15648 1581 aaPredicted RBP15.82■□□□□ 0.12
IFT88-203ENST00000389373 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
IFT88-203ENST00000389373 MYO3AQ8NEV4 1616 aa15.82■□□□□ 0.12
IFT88-203ENST00000389373 A2MP01023 1474 aa15.81■□□□□ 0.12
IFT88-203ENST00000389373 CCDC18Q5T9S5 1454 aa15.81■□□□□ 0.12
IFT88-203ENST00000389373 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
IFT88-203ENST00000389373 CDC42BPAQ5VT25 1732 aa15.8■□□□□ 0.12
IFT88-203ENST00000389373 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
IFT88-203ENST00000389373 ZNF142P52746 1687 aaPredicted RBP15.78■□□□□ 0.12
IFT88-203ENST00000389373 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
IFT88-203ENST00000389373 FBXO31Q5XUX0 539 aaPredicted RBP15.77■□□□□ 0.12
IFT88-203ENST00000389373 GPATCH8Q9UKJ3 1502 aaKnown RBP15.77■□□□□ 0.11
IFT88-203ENST00000389373 A2ML1A8K2U0 1454 aa15.76■□□□□ 0.11
IFT88-203ENST00000389373 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
IFT88-203ENST00000389373 SHANK2Q9UPX8 1470 aa15.75■□□□□ 0.11
IFT88-203ENST00000389373 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
IFT88-203ENST00000389373 CPS1P31327 1500 aa15.73■□□□□ 0.11
IFT88-203ENST00000389373 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
IFT88-203ENST00000389373 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
IFT88-203ENST00000389373 TNRQ92752 1358 aa15.73■□□□□ 0.11
IFT88-203ENST00000389373 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
IFT88-203ENST00000389373 ZNF644Q9H582 1327 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms