RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.2
RAPGEF3-201ENST00000389212 MIA2Q96PC5 1412 aa16.33■□□□□ 0.2
RAPGEF3-201ENST00000389212 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 KIAA0556O60303 1618 aa16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
RAPGEF3-201ENST00000389212 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
RAPGEF3-201ENST00000389212 DAPK1P53355 1430 aa16.31■□□□□ 0.2
RAPGEF3-201ENST00000389212 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
RAPGEF3-201ENST00000389212 ABCC5O15440 1437 aa16.3■□□□□ 0.2
RAPGEF3-201ENST00000389212 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
RAPGEF3-201ENST00000389212 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
RAPGEF3-201ENST00000389212 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF3-201ENST00000389212 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
RAPGEF3-201ENST00000389212 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF3-201ENST00000389212 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF3-201ENST00000389212 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF3-201ENST00000389212 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
RAPGEF3-201ENST00000389212 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF3-201ENST00000389212 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF3-201ENST00000389212 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
RAPGEF3-201ENST00000389212 RAPGEF6Q8TEU7 1601 aa16.26■□□□□ 0.19
RAPGEF3-201ENST00000389212 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAPGEF3-201ENST00000389212 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
RAPGEF3-201ENST00000389212 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
RAPGEF3-201ENST00000389212 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
RAPGEF3-201ENST00000389212 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
RAPGEF3-201ENST00000389212 NEFLP07196 543 aa16.22■□□□□ 0.19
RAPGEF3-201ENST00000389212 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
RAPGEF3-201ENST00000389212 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-201ENST00000389212 EIF5BO60841 1220 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-201ENST00000389212 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
RAPGEF3-201ENST00000389212 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-201ENST00000389212 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
RAPGEF3-201ENST00000389212 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-201ENST00000389212 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
RAPGEF3-201ENST00000389212 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
RAPGEF3-201ENST00000389212 KIF14Q15058 1648 aa16.19■□□□□ 0.18
RAPGEF3-201ENST00000389212 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-201ENST00000389212 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
RAPGEF3-201ENST00000389212 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-201ENST00000389212 FAM9BQ8IZU0 186 aa16.16■□□□□ 0.18
RAPGEF3-201ENST00000389212 PKD2Q13563 968 aa16.16■□□□□ 0.18
RAPGEF3-201ENST00000389212 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-201ENST00000389212 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
RAPGEF3-201ENST00000389212 DEKP35659 375 aaKnown RBP16.14■□□□□ 0.18
RAPGEF3-201ENST00000389212 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
RAPGEF3-201ENST00000389212 NCOA1Q15788 1441 aa16.14■□□□□ 0.17
RAPGEF3-201ENST00000389212 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
RAPGEF3-201ENST00000389212 PZPP20742 1482 aa16.13■□□□□ 0.17
RAPGEF3-201ENST00000389212 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
RAPGEF3-201ENST00000389212 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
RAPGEF3-201ENST00000389212 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
RAPGEF3-201ENST00000389212 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
RAPGEF3-201ENST00000389212 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
RAPGEF3-201ENST00000389212 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF3-201ENST00000389212 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
RAPGEF3-201ENST00000389212 HNRNPMP52272 730 aaKnown RBP eCLIP16.1■□□□□ 0.17
RAPGEF3-201ENST00000389212 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
RAPGEF3-201ENST00000389212 NUP160Q12769 1436 aa16.08■□□□□ 0.16
RAPGEF3-201ENST00000389212 ANKRD30AQ9BXX3 1397 aa16.08■□□□□ 0.16
RAPGEF3-201ENST00000389212 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
RAPGEF3-201ENST00000389212 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
RAPGEF3-201ENST00000389212 NUP155O75694 1391 aa16.06■□□□□ 0.16
RAPGEF3-201ENST00000389212 ATP10BO94823 1461 aa16.06■□□□□ 0.16
RAPGEF3-201ENST00000389212 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
RAPGEF3-201ENST00000389212 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
RAPGEF3-201ENST00000389212 NBR1Q14596 966 aa16.05■□□□□ 0.16
RAPGEF3-201ENST00000389212 SPATA31E1Q6ZUB1 1445 aa16.04■□□□□ 0.16
RAPGEF3-201ENST00000389212 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
RAPGEF3-201ENST00000389212 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
RAPGEF3-201ENST00000389212 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
RAPGEF3-201ENST00000389212 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.16
RAPGEF3-201ENST00000389212 USP47Q96K76 1375 aa16.02■□□□□ 0.16
RAPGEF3-201ENST00000389212 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
RAPGEF3-201ENST00000389212 ADGRL2O95490 1459 aa16■□□□□ 0.15
RAPGEF3-201ENST00000389212 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
RAPGEF3-201ENST00000389212 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
RAPGEF3-201ENST00000389212 ADCY10Q96PN6 1610 aa15.99■□□□□ 0.15
RAPGEF3-201ENST00000389212 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
RAPGEF3-201ENST00000389212 ABCA8O94911 1581 aa15.99■□□□□ 0.15
RAPGEF3-201ENST00000389212 PTPRGP23470 1445 aa15.99■□□□□ 0.15
RAPGEF3-201ENST00000389212 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
RAPGEF3-201ENST00000389212 KIF15Q9NS87 1388 aa15.98■□□□□ 0.15
RAPGEF3-201ENST00000389212 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
RAPGEF3-201ENST00000389212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
RAPGEF3-201ENST00000389212 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
RAPGEF3-201ENST00000389212 MBD5Q9P267 1494 aa15.96■□□□□ 0.15
RAPGEF3-201ENST00000389212 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
RAPGEF3-201ENST00000389212 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
RAPGEF3-201ENST00000389212 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
RAPGEF3-201ENST00000389212 MSH5O43196 834 aa15.93■□□□□ 0.14
RAPGEF3-201ENST00000389212 DHX29Q7Z478 1369 aaKnown RBP15.92■□□□□ 0.14
RAPGEF3-201ENST00000389212 PKNOX2Q96KN3 472 aa15.92■□□□□ 0.14
RAPGEF3-201ENST00000389212 ZBED9Q6R2W3 1325 aa15.9■□□□□ 0.14
RAPGEF3-201ENST00000389212 B4GALNT3Q6L9W6 998 aa15.89■□□□□ 0.13
RAPGEF3-201ENST00000389212 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
RAPGEF3-201ENST00000389212 KDM5CP41229 1560 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms