RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 FOXD4L1Q9NU39 408 aa6.47□□□□□ -1.37
LTN1-202ENST00000389194 PTMAP06454 111 aaKnown RBP6.46□□□□□ -1.38
LTN1-202ENST00000389194 DNTTIP2Q5QJE6 756 aaKnown RBP6.46□□□□□ -1.38
LTN1-202ENST00000389194 RRP7AQ9Y3A4 280 aaKnown RBP6.46□□□□□ -1.38
LTN1-202ENST00000389194 HNRNPMP52272 730 aaKnown RBP eCLIP6.46□□□□□ -1.38
LTN1-202ENST00000389194 BCL2L13Q9BXK5 485 aa6.46□□□□□ -1.38
LTN1-202ENST00000389194 NAP1L2Q9ULW6 460 aaPredicted RBP6.45□□□□□ -1.38
LTN1-202ENST00000389194 HSP90AB1P08238 724 aaKnown RBP6.45□□□□□ -1.38
LTN1-202ENST00000389194 RCAN3Q9UKA8 241 aa6.45□□□□□ -1.38
LTN1-202ENST00000389194 RAPGEF2Q9Y4G8 1499 aa6.45□□□□□ -1.38
LTN1-202ENST00000389194 FHOD3Q2V2M9 1422 aa6.44□□□□□ -1.38
LTN1-202ENST00000389194 TMF1P82094 1093 aa6.44□□□□□ -1.38
LTN1-202ENST00000389194 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
LTN1-202ENST00000389194 BAZ1AQ9NRL2 1556 aaPredicted RBP6.43□□□□□ -1.38
LTN1-202ENST00000389194 HAP1P54257 671 aaPredicted RBP6.43□□□□□ -1.38
LTN1-202ENST00000389194 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
LTN1-202ENST00000389194 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.383e-9■■■■□ 22.1
LTN1-202ENST00000389194 CCER2I3L3R5 266 aa6.43□□□□□ -1.38
LTN1-202ENST00000389194 NUP155O75694 1391 aa6.42□□□□□ -1.38
LTN1-202ENST00000389194 NOL8Q76FK4 1167 aaKnown RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 ARHGAP35Q9NRY4 1499 aa6.42□□□□□ -1.38
LTN1-202ENST00000389194 OS9Q13438 667 aaPredicted RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 ELL2O00472 640 aaPredicted RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 GLIPR1L2Q4G1C9 344 aa6.42□□□□□ -1.38
LTN1-202ENST00000389194 ROCK2O75116 1388 aaKnown RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 GOLGA6L22H0YM25 854 aa6.42□□□□□ -1.38
LTN1-202ENST00000389194 FOXD4L5Q5VV16 416 aaPredicted RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 FOXD4L4Q8WXT5 416 aaPredicted RBP6.42□□□□□ -1.38
LTN1-202ENST00000389194 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
LTN1-202ENST00000389194 ST20-MTHFSA0A0A6YYL1 179 aa6.41□□□□□ -1.38
LTN1-202ENST00000389194 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
LTN1-202ENST00000389194 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
LTN1-202ENST00000389194 ITPRIPQ8IWB1 547 aa6.41□□□□□ -1.38
LTN1-202ENST00000389194 DHX57Q6P158 1386 aaKnown RBP6.41□□□□□ -1.38
LTN1-202ENST00000389194 MFAP1P55081 439 aaKnown RBP6.41□□□□□ -1.38
LTN1-202ENST00000389194 TCERG1O14776 1098 aaKnown RBP6.41□□□□□ -1.38
LTN1-202ENST00000389194 EXOC6Q8TAG9 804 aa6.4□□□□□ -1.38
LTN1-202ENST00000389194 KCNJ4P48050 445 aa6.4□□□□□ -1.39
LTN1-202ENST00000389194 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.39
LTN1-202ENST00000389194 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.39
LTN1-202ENST00000389194 FHAD1B1AJZ9 1412 aa6.4□□□□□ -1.39
LTN1-202ENST00000389194 PAK3O75914 559 aaPredicted RBP6.39□□□□□ -1.39
LTN1-202ENST00000389194 ZNF330Q9Y3S2 320 aaPredicted RBP6.39□□□□□ -1.39
LTN1-202ENST00000389194 NACADO15069 1562 aa6.39□□□□□ -1.39
LTN1-202ENST00000389194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.39□□□□□ -1.392e-6■■■□□ 17.9
LTN1-202ENST00000389194 TRAK1Q9UPV9 953 aa6.39□□□□□ -1.39
LTN1-202ENST00000389194 KTN1Q86UP2 1357 aaKnown RBP6.39□□□□□ -1.39
LTN1-202ENST00000389194 FGD1P98174 961 aa6.39□□□□□ -1.39
LTN1-202ENST00000389194 HSCBQ8IWL3 235 aa6.38□□□□□ -1.39
LTN1-202ENST00000389194 KIF3BO15066 747 aa6.38□□□□□ -1.39
LTN1-202ENST00000389194 ZNF644Q9H582 1327 aaPredicted RBP6.38□□□□□ -1.39
LTN1-202ENST00000389194 ERICH6BQ5W0A0 696 aa6.38□□□□□ -1.39
LTN1-202ENST00000389194 CASC1Q6TDU7 716 aa6.38□□□□□ -1.39
LTN1-202ENST00000389194 LTV1Q96GA3 475 aaPredicted RBP6.37□□□□□ -1.39
LTN1-202ENST00000389194 PANK3Q9H999 370 aa6.37□□□□□ -1.39
LTN1-202ENST00000389194 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
LTN1-202ENST00000389194 SLC4A10Q6U841 1118 aa6.37□□□□□ -1.39
LTN1-202ENST00000389194 TRHP20396 242 aaPredicted RBP6.36□□□□□ -1.39
LTN1-202ENST00000389194 CRBNQ96SW2 442 aa6.36□□□□□ -1.39
LTN1-202ENST00000389194 SMC4Q9NTJ3 1288 aa6.36□□□□□ -1.39
LTN1-202ENST00000389194 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
LTN1-202ENST00000389194 PRKRIP1Q9H875 184 aaPredicted RBP6.35□□□□□ -1.39
LTN1-202ENST00000389194 ZRSR1Q15695 479 aaKnown RBP6.35□□□□□ -1.39
LTN1-202ENST00000389194 COG6Q9Y2V7 657 aa6.35□□□□□ -1.39
LTN1-202ENST00000389194 ZNF428Q96B54 188 aa6.34□□□□□ -1.39
LTN1-202ENST00000389194 NECTIN2Q92692 538 aa6.34□□□□□ -1.39
LTN1-202ENST00000389194 GOLGA2Q08379 1002 aa6.34□□□□□ -1.39
LTN1-202ENST00000389194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.34□□□□□ -1.39
LTN1-202ENST00000389194 NPHP1O15259 732 aa6.33□□□□□ -1.4
LTN1-202ENST00000389194 APAF1O14727 1248 aa6.33□□□□□ -1.4
LTN1-202ENST00000389194 PDE4AP27815 886 aa6.33□□□□□ -1.4
LTN1-202ENST00000389194 CCDC184Q52MB2 194 aa6.33□□□□□ -1.4
LTN1-202ENST00000389194 TRIM6-TRIM34B2RNG4 842 aa6.33□□□□□ -1.4
LTN1-202ENST00000389194 SKAP1Q86WV1 359 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 CDCA7LQ96GN5 454 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 RTF1Q92541 710 aaKnown RBP6.32□□□□□ -1.4
LTN1-202ENST00000389194 TIMELESSQ9UNS1 1208 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 FMN1Q68DA7 1419 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 BCL11BQ9C0K0 894 aaPredicted RBP6.32□□□□□ -1.4
LTN1-202ENST00000389194 C11orf95C9JLR9 678 aaPredicted RBP6.32□□□□□ -1.4
LTN1-202ENST00000389194 NLRP13Q86W25 1043 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 RALBP1Q15311 655 aa6.32□□□□□ -1.4
LTN1-202ENST00000389194 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
LTN1-202ENST00000389194 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
LTN1-202ENST00000389194 CENPJQ9HC77 1338 aaPredicted RBP6.31□□□□□ -1.4
LTN1-202ENST00000389194 MSNP26038 577 aaKnown RBP6.31□□□□□ -1.4
LTN1-202ENST00000389194 KANK1Q14678 1352 aa6.3□□□□□ -1.4
LTN1-202ENST00000389194 RRP1P56182 461 aaKnown RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 RWDD1Q9H446 243 aaPredicted RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 ANO8Q9HCE9 1232 aaPredicted RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 MINK1Q8N4C8 1332 aaPredicted RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 NGEFQ8N5V2 710 aa6.3□□□□□ -1.4
LTN1-202ENST00000389194 HDGFL2Q7Z4V5 671 aaPredicted RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 ISY1Q9ULR0 285 aaKnown RBP6.3□□□□□ -1.4
LTN1-202ENST00000389194 USP47Q96K76 1375 aa6.3□□□□□ -1.4
LTN1-202ENST00000389194 NCBP3Q53F19 620 aaKnown RBP6.29□□□□□ -1.4
LTN1-202ENST00000389194 ANKRD30AQ9BXX3 1397 aa6.29□□□□□ -1.4
LTN1-202ENST00000389194 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
LTN1-202ENST00000389194 JPH4Q96JJ6 628 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms