RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 PLCH2O75038 1416 aa35.83■■■■□ 3.33
CNEP1R1-201ENST00000389134 CERKQ8TCT0 537 aa35.83■■■■□ 3.33
CNEP1R1-201ENST00000389134 CDK13Q14004 1512 aaKnown RBP35.82■■■■□ 3.32
CNEP1R1-201ENST00000389134 ATP10AO60312 1499 aa35.77■■■■□ 3.32
CNEP1R1-201ENST00000389134 ARHGEF12Q9NZN5 1544 aa35.76■■■■□ 3.31
CNEP1R1-201ENST00000389134 MYO5CQ9NQX4 1742 aa35.75■■■■□ 3.31
CNEP1R1-201ENST00000389134 SETD1BQ9UPS6 1966 aaKnown RBP35.75■■■■□ 3.31
CNEP1R1-201ENST00000389134 PREX1Q8TCU6 1659 aa35.74■■■■□ 3.31
CNEP1R1-201ENST00000389134 EFCAB2Q5VUJ9 269 aa35.73■■■■□ 3.31
CNEP1R1-201ENST00000389134 C9orf84Q5VXU9 1444 aa35.73■■■■□ 3.31
CNEP1R1-201ENST00000389134 CDK11AQ9UQ88 783 aaPredicted RBP35.66■■■■□ 3.3
CNEP1R1-201ENST00000389134 FMN1Q68DA7 1419 aa35.64■■■■□ 3.3
CNEP1R1-201ENST00000389134 ATP1B4Q9UN42 357 aaPredicted RBP35.63■■■■□ 3.29
CNEP1R1-201ENST00000389134 DMRT2Q9Y5R5 561 aa35.61■■■■□ 3.29
CNEP1R1-201ENST00000389134 ZNF518AQ6AHZ1 1483 aa35.6■■■■□ 3.29
CNEP1R1-201ENST00000389134 CEBPAP49715 358 aaPredicted RBP35.6■■■■□ 3.29
CNEP1R1-201ENST00000389134 STRCQ7RTU9 1775 aa35.59■■■■□ 3.29
CNEP1R1-201ENST00000389134 KIF14Q15058 1648 aa35.57■■■■□ 3.28
CNEP1R1-201ENST00000389134 KDM5CP41229 1560 aa35.55■■■■□ 3.28
CNEP1R1-201ENST00000389134 ARHGAP5Q13017 1502 aa35.53■■■■□ 3.28
CNEP1R1-201ENST00000389134 UHRF1BP1Q6BDS2 1440 aa35.52■■■■□ 3.28
CNEP1R1-201ENST00000389134 UBTFP17480 764 aaKnown RBP35.52■■■■□ 3.28
CNEP1R1-201ENST00000389134 AFAP1Q8N556 730 aa35.52■■■■□ 3.28
CNEP1R1-201ENST00000389134 TROQ12816 1431 aaPredicted RBP35.51■■■■□ 3.28
CNEP1R1-201ENST00000389134 MYT1LQ9UL68 1186 aa35.5■■■■□ 3.27
CNEP1R1-201ENST00000389134 CLIP1P30622 1438 aa35.48■■■■□ 3.27
CNEP1R1-201ENST00000389134 ARHGAP35Q9NRY4 1499 aa35.48■■■■□ 3.27
CNEP1R1-201ENST00000389134 REREQ9P2R6 1566 aa35.47■■■■□ 3.27
CNEP1R1-201ENST00000389134 DIP2CQ9Y2E4 1556 aa35.47■■■■□ 3.27
CNEP1R1-201ENST00000389134 CDC42BPBQ9Y5S2 1711 aa35.44■■■■□ 3.26
CNEP1R1-201ENST00000389134 C3P01024 1663 aa35.42■■■■□ 3.26
CNEP1R1-201ENST00000389134 MLH3Q9UHC1 1453 aa35.41■■■■□ 3.26
CNEP1R1-201ENST00000389134 LRRIQ1Q96JM4 1722 aa35.4■■■■□ 3.26
CNEP1R1-201ENST00000389134 EHMT2Q96KQ7 1210 aa35.4■■■■□ 3.26
CNEP1R1-201ENST00000389134 ABCA6Q8N139 1617 aa35.39■■■■□ 3.26
CNEP1R1-201ENST00000389134 DISP3Q9P2K9 1392 aa35.38■■■■□ 3.26
CNEP1R1-201ENST00000389134 PTPRTO14522 1441 aa35.38■■■■□ 3.25
CNEP1R1-201ENST00000389134 ESF1Q9H501 851 aaKnown RBP35.37■■■■□ 3.25
CNEP1R1-201ENST00000389134 AGLP35573 1532 aa35.37■■■■□ 3.25
CNEP1R1-201ENST00000389134 PREX2Q70Z35 1606 aa35.32■■■■□ 3.24
CNEP1R1-201ENST00000389134 TRAPPC8Q9Y2L5 1435 aa35.31■■■■□ 3.24
CNEP1R1-201ENST00000389134 ITSN2Q9NZM3 1697 aa35.3■■■■□ 3.24
CNEP1R1-201ENST00000389134 ABCC1P33527 1531 aa35.29■■■■□ 3.24
CNEP1R1-201ENST00000389134 ILDR2Q71H61 639 aa35.29■■■■□ 3.24
CNEP1R1-201ENST00000389134 KIDINS220Q9ULH0 1771 aa35.25■■■■□ 3.23
CNEP1R1-201ENST00000389134 CNTLNQ9NXG0 1405 aa35.25■■■■□ 3.23
CNEP1R1-201ENST00000389134 SOCS7O14512 581 aa35.25■■■■□ 3.23
CNEP1R1-201ENST00000389134 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
CNEP1R1-201ENST00000389134 LTBP4Q8N2S1 1624 aa35.2■■■■□ 3.23
CNEP1R1-201ENST00000389134 CDC42BPAQ5VT25 1732 aa35.2■■■■□ 3.23
CNEP1R1-201ENST00000389134 IQSEC2Q5JU85 1478 aa35.19■■■■□ 3.22
CNEP1R1-201ENST00000389134 NCOA1Q15788 1441 aa35.18■■■■□ 3.22
CNEP1R1-201ENST00000389134 MROH2AA6NES4 1674 aa35.16■■■■□ 3.22
CNEP1R1-201ENST00000389134 CASKIN1Q8WXD9 1431 aa35.15■■■■□ 3.22
CNEP1R1-201ENST00000389134 SPATA31D1Q6ZQQ2 1576 aa35.15■■■■□ 3.22
CNEP1R1-201ENST00000389134 NPATQ14207 1427 aa35.12■■■■□ 3.21
CNEP1R1-201ENST00000389134 SAMD9LQ8IVG5 1584 aa35.09■■■■□ 3.21
CNEP1R1-201ENST00000389134 CAMSAP1Q5T5Y3 1602 aa35.09■■■■□ 3.21
CNEP1R1-201ENST00000389134 ZMYM3Q14202 1370 aa35.06■■■■□ 3.2
CNEP1R1-201ENST00000389134 SUPT6HQ7KZ85 1726 aaKnown RBP35.05■■■■□ 3.2
CNEP1R1-201ENST00000389134 ZNF777Q9ULD5 760 aaPredicted RBP35.03■■■■□ 3.2
CNEP1R1-201ENST00000389134 SPAG9O60271 1321 aaKnown RBP35.03■■■■□ 3.2
CNEP1R1-201ENST00000389134 SYCP2Q9BX26 1530 aa35■■■■□ 3.19
CNEP1R1-201ENST00000389134 FYCO1Q9BQS8 1478 aa34.98■■■■□ 3.19
CNEP1R1-201ENST00000389134 CLTCQ00610 1675 aaKnown RBP34.97■■■■□ 3.19
CNEP1R1-201ENST00000389134 GPATCH8Q9UKJ3 1502 aaKnown RBP34.96■■■■□ 3.19
CNEP1R1-201ENST00000389134 CHIC1Q5VXU3 224 aa34.96■■■■□ 3.19
CNEP1R1-201ENST00000389134 NCKAP5LQ9HCH0 1330 aa34.96■■■■□ 3.19
CNEP1R1-201ENST00000389134 HNRNPMP52272 730 aaKnown RBP eCLIP34.95■■■■□ 3.19
CNEP1R1-201ENST00000389134 ZNF142P52746 1687 aaPredicted RBP34.95■■■■□ 3.18
CNEP1R1-201ENST00000389134 ATP7AQ04656 1500 aa34.94■■■■□ 3.18
CNEP1R1-201ENST00000389134 PKD2Q13563 968 aa34.93■■■■□ 3.18
CNEP1R1-201ENST00000389134 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
CNEP1R1-201ENST00000389134 MYO3AQ8NEV4 1616 aa34.92■■■■□ 3.18
CNEP1R1-201ENST00000389134 PLA2R1Q13018 1463 aa34.91■■■■□ 3.18
CNEP1R1-201ENST00000389134 PLXNC1O60486 1568 aa34.91■■■■□ 3.18
CNEP1R1-201ENST00000389134 PLEKHH2Q8IVE3 1493 aa34.9■■■■□ 3.18
CNEP1R1-201ENST00000389134 ZNF335Q9H4Z2 1342 aaPredicted RBP34.9■■■■□ 3.18
CNEP1R1-201ENST00000389134 A2MP01023 1474 aa34.89■■■■□ 3.18
CNEP1R1-201ENST00000389134 INO80Q9ULG1 1556 aaPredicted RBP34.88■■■■□ 3.17
CNEP1R1-201ENST00000389134 UBAP1LF5GYI3 381 aa34.87■■■■□ 3.17
CNEP1R1-201ENST00000389134 PTPRKQ15262 1439 aa34.87■■■■□ 3.17
CNEP1R1-201ENST00000389134 CFDP1Q9UEE9 299 aaPredicted RBP34.86■■■■□ 3.17
CNEP1R1-201ENST00000389134 CEP170BQ9Y4F5 1589 aaPredicted RBP34.86■■■■□ 3.17
CNEP1R1-201ENST00000389134 GGT6Q6P531 493 aa34.84■■■■□ 3.17
CNEP1R1-201ENST00000389134 PPP6R1Q9UPN7 881 aa34.84■■■■□ 3.17
CNEP1R1-201ENST00000389134 TCOF1Q13428 1488 aaKnown RBP34.84■■■■□ 3.17
CNEP1R1-201ENST00000389134 ADGBQ8N7X0 1667 aa34.82■■■■□ 3.16
CNEP1R1-201ENST00000389134 CCNB3Q8WWL7 1395 aa34.81■■■■□ 3.16
CNEP1R1-201ENST00000389134 A2ML1A8K2U0 1454 aa34.71■■■■□ 3.15
CNEP1R1-201ENST00000389134 MTUS2Q5JR59 1369 aa34.7■■■■□ 3.15
CNEP1R1-201ENST00000389134 DNMT1P26358 1616 aaKnown RBP34.69■■■■□ 3.14
CNEP1R1-201ENST00000389134 POLR1AO95602 1720 aaPredicted RBP34.65■■■■□ 3.14
CNEP1R1-201ENST00000389134 RTEL1-TNFRSF6BF6WH68 1400 aa34.64■■■■□ 3.14
CNEP1R1-201ENST00000389134 ZNF644Q9H582 1327 aaPredicted RBP34.61■■■■□ 3.13
CNEP1R1-201ENST00000389134 MBD5Q9P267 1494 aa34.61■■■■□ 3.13
CNEP1R1-201ENST00000389134 TIAM1Q13009 1591 aa34.61■■■■□ 3.13
CNEP1R1-201ENST00000389134 DHX29Q7Z478 1369 aaKnown RBP34.6■■■■□ 3.13
CNEP1R1-201ENST00000389134 CPS1P31327 1500 aa34.57■■■■□ 3.12
CNEP1R1-201ENST00000389134 TOM1O60784 492 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms